Basic Information

Insect: Micropterix aruncella
Gene Symbol: -
Assembly: GCA_944547385.1
Location: CALYMV010001655.1:64392-65471[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.001 0.063 14.9 8.6 1 23 113 136 105 136 0.95

2 8 1.4e-07 8.7e-06 27.1 0.4 2 23 143 165 142 165 0.97

3 8 1.6e-06 9.5e-05 23.8 0.6 1 23 170 193 170 193 0.95

4 8 9.1e-07 5.5e-05 24.5 0.1 1 23 199 222 199 222 0.96

5 8 3.3e-06 0.0002 22.8 0.6 1 23 228 251 228 251 0.97

6 8 0.00026 0.015 16.8 3.9 1 23 257 280 257 280 0.94

7 8 8.8e-05 0.0053 18.3 0.8 1 23 286 309 286 309 0.95

8 8 0.001 0.061 14.9 2.0 1 21 315 335 315 336 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.001	0.063	14.9	8.6	1	23	113	136	105	136	0.95
2	8	1.4e-07	8.7e-06	27.1	0.4	2	23	143	165	142	165	0.97
3	8	1.6e-06	9.5e-05	23.8	0.6	1	23	170	193	170	193	0.95
4	8	9.1e-07	5.5e-05	24.5	0.1	1	23	199	222	199	222	0.96
5	8	3.3e-06	0.0002	22.8	0.6	1	23	228	251	228	251	0.97
6	8	0.00026	0.015	16.8	3.9	1	23	257	280	257	280	0.94
7	8	8.8e-05	0.0053	18.3	0.8	1	23	286	309	286	309	0.95
8	8	0.001	0.061	14.9	2.0	1	21	315	335	315	336	0.94

Sequence Information

Coding Sequence: ATGGAAAAGCAACACGACAATGAATCTAATGCAGATGTTAAATTAAAGATTGAAAATGGCGATGAAGATTCCTTCGACGTAGTCGGAGAAAACGTTCTATTGTTTGAAGAGGGTCAGACATGTTTTATCAATGCAGGGCAATGCTATCCCGTGGAATCAGACGTCCAGGAAGATATTAAAGATGTTGTTTTATTAGAGGTTAATGAATCATTGAAGAAATTTGGTGATTCCTTTTGCATTGCATGCGGTTGTAAAATCGATACCAGTAAGCTGATGGCTTATTGGAAATGCGTCAAAGATATGGTGGAATTGCTGTGCGATGTTTGCAGTAAGAAATTCGTGTGCGCTGAGTGTCACCGTATGTTTGTTCATAAGGCTCACCTGAAACGACACATCGAAGGGCTGCATCTCAATATAGAGAGAAATAAATGTGGAGAATGTGGCAAGACTTTCACGCAAAAAGGCAGTTTGAACGCGCATATAAAATCAATCCACCGCAAATTGAAGTATTCGTGTCAAGAGTGCGAAAAATCTTATACTCGTCGCGGTAACTTAACTACACACATTAACGACATCCACCGAAAACcaaataattatgtatgttGGATATGCGACAAAGCATTTGCAAGCAAACCAAACCTCAAAAAACACCTCGACATGGTCCATagcaaaatgaaggaatttagATGCGAGGTATGTGAAAGAGAATTCTTTCAACAGAGTGACTTAAAAGAACATATGAATTCAGTTCATCGGAAGTTGAAGCCATTCGCCTGCAAGATATGCAAACACAGCTTTTCAAAGCGGACACATTTGAATCAACACGTGAATGCCGTTCACCTTAATGTGAAGAAGTTTATTTGCGCTGAATGTCACCACGCTTACTCGCGTAAAGAAGACTTAGCTAAACACATAAATGCAATTCATCTGAAATTGAAGCCGTTTATTTGTTCGAAATGTACGCGTGCATTTGGCAGAAAAGATACCTATAAACGACACTTACATTCTGGTAGTTGTTCCTTGAAAATACCCAACAGCAGTGCCAAAATAACCTCAATCAATCTGCGAAGTAATGTGTAG
Protein Sequence: MEKQHDNESNADVKLKIENGDEDSFDVVGENVLLFEEGQTCFINAGQCYPVESDVQEDIKDVVLLEVNESLKKFGDSFCIACGCKIDTSKLMAYWKCVKDMVELLCDVCSKKFVCAECHRMFVHKAHLKRHIEGLHLNIERNKCGECGKTFTQKGSLNAHIKSIHRKLKYSCQECEKSYTRRGNLTTHINDIHRKPNNYVCWICDKAFASKPNLKKHLDMVHSKMKEFRCEVCEREFFQQSDLKEHMNSVHRKLKPFACKICKHSFSKRTHLNQHVNAVHLNVKKFICAECHHAYSRKEDLAKHINAIHLKLKPFICSKCTRAFGRKDTYKRHLHSGSCSLKIPNSSAKITSINLRSNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -