Basic Information

Insect: Micropterix aruncella
Gene Symbol: -
Assembly: GCA_944547385.1
Location: CALYMV010003838.1:10736-11617[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.6e-05 0.0034 18.9 1.3 1 23 64 87 64 87 0.92

2 8 0.00064 0.039 15.6 0.0 1 20 91 110 91 111 0.96

3 8 3.5e-05 0.0021 19.5 0.2 1 23 120 143 120 143 0.95

4 8 2.1e-05 0.0012 20.3 0.1 1 23 149 172 149 172 0.92

5 8 1.8e-05 0.0011 20.5 0.1 1 21 178 198 178 201 0.89

6 8 1.1e-05 0.00069 21.1 0.4 1 23 207 230 207 230 0.92

7 8 6.1e-05 0.0037 18.8 0.5 2 20 237 255 235 256 0.92

8 8 2.6e-05 0.0016 20.0 1.3 1 23 265 288 265 288 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.6e-05	0.0034	18.9	1.3	1	23	64	87	64	87	0.92
2	8	0.00064	0.039	15.6	0.0	1	20	91	110	91	111	0.96
3	8	3.5e-05	0.0021	19.5	0.2	1	23	120	143	120	143	0.95
4	8	2.1e-05	0.0012	20.3	0.1	1	23	149	172	149	172	0.92
5	8	1.8e-05	0.0011	20.5	0.1	1	21	178	198	178	201	0.89
6	8	1.1e-05	0.00069	21.1	0.4	1	23	207	230	207	230	0.92
7	8	6.1e-05	0.0037	18.8	0.5	2	20	237	255	235	256	0.92
8	8	2.6e-05	0.0016	20.0	1.3	1	23	265	288	265	288	0.97

Sequence Information

Coding Sequence: ATGAGTGAGCAAACTGTTAAGATTGAAGTCGATTCAGATTCGGATATTTCTCATAGCGACTTGGTGCCAGACGAAAGAGGAAATGTGGTAGAATTCTACGAAGGAATGACTCTACTGATAAAGCCAGAGTCGAAACGCATCGAAGCTGGACCATCCGGAGGCAGTGTTAGTGCGGGACGTGTTAAATCGCATGTATGTCGAGATTGTGACAAGGTGTTTACTTATAAGAATAGGTTAAAACAACATATTGACGGTGTTCACTTAAAGAAATTTGTTTGTAAGGAATGCGATCGCGCATTTGTAGGACAAGTAGTGCTAAAAAGACACATAGACTGCGTGCATATGAAGTTGAAGAGATTTAGTTGTGGTGAATGTGAACGTGCGTTTTCAGAGCGAGGAAGTTTAAAGCGGCACTTAGACTCCGTTCACATGAAAAGGAAGAAATTCTCATGCGGCGAGTGTGATCGCGCCTTTACAGAAAAGGGAAATTTGAAAATCCACTTGGACGCCGTCCATAGGCAACTGAAGACGTTCGCGTGCGACGAATGTGAACGCGCCTTCACGCGGCAAGGCGATTTGCAGAGACACTCTGAAGCGGTCCATAGAAAGTGGAAGAAATTCCCGTGTGGTGAATGCGGGCGCGCTTTCACTCACCAGGGACATTTGAAGGGCCACTTGGACGCCGTGCACAGGAAAATCAAGAAGTGTGAGTGTGGGGTGTGTGGTCGATCGTTTTCTTCGAAGCAGGCTTTGAAAATGCATATAGATTGTTTTCATGGGAAATTGAAGAATTTCGTTTGCGCCGAATGCAACCGCGCGTTCGGATATCGTTCACACCTAATAGCGCATTATAAGAAAACTCATCTTACAGTGTCGTATTAA
Protein Sequence: MSEQTVKIEVDSDSDISHSDLVPDERGNVVEFYEGMTLLIKPESKRIEAGPSGGSVSAGRVKSHVCRDCDKVFTYKNRLKQHIDGVHLKKFVCKECDRAFVGQVVLKRHIDCVHMKLKRFSCGECERAFSERGSLKRHLDSVHMKRKKFSCGECDRAFTEKGNLKIHLDAVHRQLKTFACDECERAFTRQGDLQRHSEAVHRKWKKFPCGECGRAFTHQGHLKGHLDAVHRKIKKCECGVCGRSFSSKQALKMHIDCFHGKLKNFVCAECNRAFGYRSHLIAHYKKTHLTVSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -