Basic Information

Insect: Micropterix aruncella
Gene Symbol: -
Assembly: GCA_944547385.1
Location: CALYMV010004355.1:20673-44730[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.048 2.9 9.7 1.5 1 23 93 115 93 115 0.97

2 12 0.0093 0.56 11.9 1.2 1 23 127 150 127 150 0.95

3 12 5.3e-05 0.0032 19.0 2.6 1 23 166 188 166 188 0.97

4 12 1.9e-05 0.0012 20.3 4.2 1 23 194 216 194 216 0.99

5 12 2.8e-05 0.0017 19.9 0.7 1 23 223 245 223 245 0.98

6 12 0.00044 0.026 16.1 0.1 1 23 251 273 251 273 0.93

7 12 4.9e-05 0.0029 19.1 1.4 1 23 279 301 279 301 0.98

8 12 1.2e-05 0.00072 21.0 0.6 1 23 307 330 307 330 0.96

9 12 9.2e-06 0.00056 21.4 1.1 1 23 336 359 336 359 0.95

10 12 8.3e-05 0.005 18.4 5.2 1 23 365 387 365 387 0.99

11 12 1.3e-05 0.00076 20.9 0.5 1 23 393 415 393 415 0.97

12 12 0.08 4.8 9.0 0.0 1 21 421 441 421 442 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.048	2.9	9.7	1.5	1	23	93	115	93	115	0.97
2	12	0.0093	0.56	11.9	1.2	1	23	127	150	127	150	0.95
3	12	5.3e-05	0.0032	19.0	2.6	1	23	166	188	166	188	0.97
4	12	1.9e-05	0.0012	20.3	4.2	1	23	194	216	194	216	0.99
5	12	2.8e-05	0.0017	19.9	0.7	1	23	223	245	223	245	0.98
6	12	0.00044	0.026	16.1	0.1	1	23	251	273	251	273	0.93
7	12	4.9e-05	0.0029	19.1	1.4	1	23	279	301	279	301	0.98
8	12	1.2e-05	0.00072	21.0	0.6	1	23	307	330	307	330	0.96
9	12	9.2e-06	0.00056	21.4	1.1	1	23	336	359	336	359	0.95
10	12	8.3e-05	0.005	18.4	5.2	1	23	365	387	365	387	0.99
11	12	1.3e-05	0.00076	20.9	0.5	1	23	393	415	393	415	0.97
12	12	0.08	4.8	9.0	0.0	1	21	421	441	421	442	0.95

Sequence Information

Coding Sequence: ATGACTTCCAAGGCTGAATCTGACCCAAAATTCATCAAACGGCTCATTACTGGAGACGAGACATGGATTTATGAGTATGACACGCAATCCAGACATCAAGCTAGTGAATGGCGAGCACCGAATCAACCGCGACCGAAAAAACGACGTCCTTTTCAGTCGAAAAAGAAGGCGATGCTAACAGCTTTCATGGATTACAAAGaTAAAGTTGAAACGGGATTCGTGGGCGTTGGTGGCGCCATTTCCGGCCATATGAAAAGAGTGCACGGCTTAAGGGTGCACGTCTGTGATGTTTGCGGGGATCTGCTTAGACGTCGCTCTGAATACAACACTCATCTAAaaaaacATATGTCAGAACAGGCGAACGTGACGGGGCAGCAGTACCGTTGTTCGTTATGCGAGCGTACGTTTACCTCTATGAGCATATTCCGACTGCATAGAAGAGCTGTACATGGATCTATCAATAAGGTAGTCAACGATAGAGATGCCACCAAGCACCATCCGTGCCATTTATGCGGCAAGAAATACAGCTCTAAAAATCTGTTGGACGAGCACATGAATATCCACAATGGGGTACGTCCATATGAATGTAAAGTCTGTTCGAAGAGTTTCGCCTCCAAGTACACATATCACGCCCACCAGAAAACTCACACGGAAAGaccgcgctcattttcttgctCCGTCTGCCCGAAGGCCTTCTACACAATCCAGAATTTGAACCAGCATGAGAAGACGCATTCCGGCATCAAGGAGTTTGTCTGCATGACCTGCGGTAAAGCATTTGGAACAGCACACAACCTCGTCGTTCATGGAGTTGTACATTCCGGGCATAAACCCCACGAATGCAGAACGTGCGGGAAGTCTTTTGCAAGAAGAGCGGAGATACGTGATCATGAAAGAACCCACACAGGGGAGAGACCGTATGCGTGTGACATGTGTCCGTCATCATTTTCCCAACGGAGCAATTTGACGTCACACAGGCGAGCGACACACCTGGATGACAAGAGATACGCTTGCCAGGACTGCGATAAGAGGTTCAAAAGACGAAGATTGCTTGAATATCACATAAAGGCGTCGCACACTGGGGAGCGTCCTTACAAATGCGAGCACTGTTCGGCCACTTTTGTTTATCCAGAACACTTTAAGAAACACCGAAGAATTCACAGTGGAGAAAAACCATACGTCTGTGAGGTGTGTGGCAAATCATTCAACTCGAGGGACAACAGAAACGCTCACCGTTTCATCCACTCCGACAAGAAACCCTACGAGTGCATGGCCTGCGGAGCTGGTTTTATGCGGAAACCTTTACTTTACGCCCATATGAATGCACAGCTGTGGGACACAGCAGCCAATTCCAATATAGAGATTCTTCAGCGGTTCCAAAACAAGATGCTGAGAATAATAGTTGATGCACCATGGTATGTCACGAACGACCGTCTACATCATGACCTGGAAATCTCAACAGtgaaagaagaaattaaaactaaaatggtatcCTACCGAAAGCAAGTTCTACATCATCCAAATCAATTAGCTTCAAAGCTGATGAAAAACCGGGCTTTCcgcagattgaagaggagagcgcCCCAAGACTTGCTGGCATAA
Protein Sequence: MTSKAESDPKFIKRLITGDETWIYEYDTQSRHQASEWRAPNQPRPKKRRPFQSKKKAMLTAFMDYKDKVETGFVGVGGAISGHMKRVHGLRVHVCDVCGDLLRRRSEYNTHLKKHMSEQANVTGQQYRCSLCERTFTSMSIFRLHRRAVHGSINKVVNDRDATKHHPCHLCGKKYSSKNLLDEHMNIHNGVRPYECKVCSKSFASKYTYHAHQKTHTERPRSFSCSVCPKAFYTIQNLNQHEKTHSGIKEFVCMTCGKAFGTAHNLVVHGVVHSGHKPHECRTCGKSFARRAEIRDHERTHTGERPYACDMCPSSFSQRSNLTSHRRATHLDDKRYACQDCDKRFKRRRLLEYHIKASHTGERPYKCEHCSATFVYPEHFKKHRRIHSGEKPYVCEVCGKSFNSRDNRNAHRFIHSDKKPYECMACGAGFMRKPLLYAHMNAQLWDTAANSNIEILQRFQNKMLRIIVDAPWYVTNDRLHHDLEISTVKEEIKTKMVSYRKQVLHHPNQLASKLMKNRAFRRLKRRAPQDLLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -