Maru005200.1
Basic Information
- Insect
- Micropterix aruncella
- Gene Symbol
- -
- Assembly
- GCA_944547385.1
- Location
- CALYMV010000741.1:92677-109026[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 5.9e-05 0.0035 18.8 0.1 2 23 172 193 171 193 0.97 2 13 9.5e-05 0.0057 18.2 1.2 1 23 203 225 203 225 0.97 3 13 0.0014 0.083 14.5 2.1 1 23 232 255 232 255 0.95 4 13 7.8e-05 0.0048 18.4 0.8 1 23 285 307 285 307 0.97 5 13 7.4e-05 0.0045 18.5 1.1 3 23 316 336 314 336 0.97 6 13 0.0059 0.36 12.5 2.6 1 23 342 364 342 364 0.95 7 13 5.5e-05 0.0034 18.9 1.5 1 23 370 392 370 392 0.97 8 13 1.6e-06 9.5e-05 23.8 2.6 1 23 398 420 398 420 0.96 9 13 0.00084 0.051 15.2 0.2 1 23 426 448 426 448 0.97 10 13 0.0005 0.031 15.9 0.3 1 23 454 476 454 476 0.96 11 13 2.4e-05 0.0015 20.0 4.9 1 23 482 504 482 504 0.96 12 13 3.4e-07 2.1e-05 25.9 2.0 1 23 510 532 510 532 0.98 13 13 0.00017 0.01 17.4 1.9 1 23 538 560 538 560 0.98
Sequence Information
- Coding Sequence
- ATGTCCATCCGCCCGAATGGAATTGATGACCCCAAATTGCTGTGCAGGACTTGCATGGGTGTTGACAACGAATTATTCGACATATTTAATAGTGATCTTAACCCGCCAACTCTTCTCGAGATGCTCACTACGTGCACCGCTCTAGAGgtaTCCATGACTGATTATCTCCCTTTACAAGTGTGCGCTGAATGCGTCAAATACCTCAACATGTGCTATGAATTTCGAATGAAGTGCGAGCAGATCGATTCGGAGCTACGACGGCTGTTCGCCATGACGGAAGACTCCTCCATCCAGATCTTGCAACACGAGCCCGTCAAGCGAGAGAGCACTCTATACGAAGTCAAGCAGGAACCGTACGAAATGAAAGTCGAAATGGAGTTCCTGCCCGATTTGGGAAACGAACTGGACGGGGACGATGGTTTGAACGATATCGGAAGCGATGGCCGCGTATCGGATTCCGACCTAAAACTGGCCGAATTGAAAGAGAAGCAGATAAACGAGGCCGGCCCGCTTGAATGCTCTGTCTGTTTGCGAGGTTTCGTGAGACCCGCCTCGCTGAGGCTTCACATGAGGAGCCACGACGAGGTGGAGGCCAATAAGATGGTGCACGAATGCGCCGAGTGCCCCAGGAAGTTCGACAAAGCCTCCAAACTGCGGAGGCACCTCACCGTTCACAACCCCGTTCGCAAACCGTACCAGTGTCCGCATTGCTCGCTCAGGTATAAGACACACGTCTCTCTCCTGTCCCACATCGGCGTCTCGCATCCCGAACCGGCCTCGACAAATACGCAACTGGATAGTATTCAAACTGAAATAACCAAAAAAGAGATTGAGGAGGAAGAAGAGGATAAGTTTGCATGCGGCCATTGCCCGTCACGATTCCCCACTTCTCAGTCCCTATCGGCCCACATGCGCTCTCACAAGGACAAAGACAGAGTCATGGCTTGCTCTGTTTGCGCTAAGGTGTTTACAAAGTGGTCACACGTTCAGAGGCACGAGAGATCGCATCCGTCGTTGCGTCCGCACGCGTGCACGCAATGCACGCGCACATTTGCAAGCGAAGAGAAACTCAAAGAGCACAACAACAAACACACCGGCGTAAAACCTCACAGTTGTCCCGTCTGTAAAAAAAGTTTTGCAGAATTGACGACACTCACCACCCACGTGCGGAGTCACTCGCGCAAGAAGTCGTTCTTGTGCCCTTCGTGCGGCAAATGCTTCGACTCCTCCACTAATCTCAATCAGCACATAAGGAGACACACTGGCGAAAAGTCATTTGCCTGTCAGCTCTGCCCAGGAAAATATGTCAGCAAAGGCGAACTGCAGTCTCACATGTCAACGCACACCGGAGTGCGACCTTTCGCCTGCGAAACATGCGGCTCCTCCTTCACCAAAGCTAACTCCTTAGCCAAACATAAACTTATTCATCTCGGCATAAGGCCTCACGCTTGCGACGTGTGCAACATGAAGTTCACGAGTCGAGACCACCTGAAGCGGCACCGGCGCATCCACACGGGGGAGAAACCCTACCCTTGCGAGCACTGCGGACGCTCCTTCACACAGAGCAACGACCTCGTCAAACACACTCGCTCCCATCTGGGAGACAACATGTACAAATGTTCACAGTGCTTGGAAAGCTTCCGCCTGAAGACGGAATTGCGCAAGCATATTTCTTCGCACTTTGCGCAGGCCGCGGCGGAAGGCAAGCCGGCTCCGCGCATTCGGTCTCTGGCCTCCATGGAGATTGCTCCGATTGCCACCATTCACACCGACCTCAATCCGGAGCCTTCATCCGTGGTCGTGGTGACTTTCACTTCTCCCGAAGGATTATGA
- Protein Sequence
- MSIRPNGIDDPKLLCRTCMGVDNELFDIFNSDLNPPTLLEMLTTCTALEVSMTDYLPLQVCAECVKYLNMCYEFRMKCEQIDSELRRLFAMTEDSSIQILQHEPVKRESTLYEVKQEPYEMKVEMEFLPDLGNELDGDDGLNDIGSDGRVSDSDLKLAELKEKQINEAGPLECSVCLRGFVRPASLRLHMRSHDEVEANKMVHECAECPRKFDKASKLRRHLTVHNPVRKPYQCPHCSLRYKTHVSLLSHIGVSHPEPASTNTQLDSIQTEITKKEIEEEEEDKFACGHCPSRFPTSQSLSAHMRSHKDKDRVMACSVCAKVFTKWSHVQRHERSHPSLRPHACTQCTRTFASEEKLKEHNNKHTGVKPHSCPVCKKSFAELTTLTTHVRSHSRKKSFLCPSCGKCFDSSTNLNQHIRRHTGEKSFACQLCPGKYVSKGELQSHMSTHTGVRPFACETCGSSFTKANSLAKHKLIHLGIRPHACDVCNMKFTSRDHLKRHRRIHTGEKPYPCEHCGRSFTQSNDLVKHTRSHLGDNMYKCSQCLESFRLKTELRKHISSHFAQAAAEGKPAPRIRSLASMEIAPIATIHTDLNPEPSSVVVVTFTSPEGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01008708;
- 90% Identity
- -
- 80% Identity
- -