Maru003394.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Micropterix aruncella
Gene Symbol
-
Assembly
GCA_944547385.1
Location
CALYMV010000486.1:26977-63141[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.00028 0.017 16.7 0.1 3 23 200 220 199 220 0.97
2 15 8.4e-06 0.00051 21.5 0.7 1 23 226 248 226 248 0.98
3 15 1.5e-05 0.00092 20.7 2.7 1 23 254 276 254 276 0.99
4 15 0.0003 0.018 16.6 0.0 1 23 286 308 286 308 0.98
5 15 1.9e-06 0.00011 23.5 3.4 1 23 314 336 314 336 0.99
6 15 2.5e-06 0.00015 23.2 1.9 1 23 351 373 351 373 0.98
7 15 0.00013 0.0079 17.7 0.7 1 23 388 410 388 410 0.98
8 15 2e-06 0.00012 23.5 1.2 1 23 425 447 425 447 0.98
9 15 0.42 26 6.7 1.8 1 23 605 627 605 627 0.98
10 15 3e-06 0.00018 22.9 2.3 1 23 633 655 633 655 0.99
11 15 0.12 7.2 8.4 1.8 1 23 662 684 662 684 0.98
12 15 1.3e-05 0.0008 20.9 1.8 1 23 690 712 690 712 0.99
13 15 0.085 5.1 8.9 1.0 1 23 719 741 719 741 0.99
14 15 1.2e-05 0.00073 21.0 2.0 1 23 747 769 747 769 0.99
15 15 0.02 1.2 10.8 1.1 1 20 775 794 775 800 0.93

Sequence Information

Coding Sequence
ATGGATTGGTTATTATCGCTCGCGTGCAGATTCTACTCGTCCCACCCGCACATCCACTCGTCGTCTCCGGCGCTGATCCGCAGCGAGGGCAACCATGCCATCGTGGGGCTGAACCTGGCGCAGCACGAAGCGCTGCAGCACGCGCAGCAGGAAGCGCTGCAGCATGCGCAGCAAGAGGCGCTGCAGCACGCGCAGCAGGAAGCGCTGCAGCACGCGCAGGTGGAGGCGCTGCAGCAGGCGCAGCAGGAGGCGCTGCAGCACGCGCAGCTGGAGGCGGCCGCTGCGCAGCTGGAGGAGCAGCAGGCGGTGCAGTCGGCGCAGGCGCAGGCGCAGCTGGAGGCGGCGCAGCAGCAGCTGGAGGAGCAGCAGGAGATGGAGCTGCAGCAGCAGCAGGAGTTGCAGCAGCAGCAGGAGGACACCAAGGACAGCCTGCTGCTGCAGCAGCAGCACCGCCAGCTTCAGCATCAGCAGCACGAACTCGACCAGGAGGAGCTGCACTCGCAGGTCTCTCAGGGTATAATAGGTCTGAGCGTACAGGCTAAACTAGAGCAAGGTGTGGGACCCGGAGTGGTGCCGCAGCGCTCAAAACCTCAGGCCTGCAAAGTATGCGGGAAGGTCCTCTCCTCCGCTTCTTCTTACTATGTTCATATGAAATTGCACTCCGGAAATAAGCCGTTCGCTTGTACCGTGTGTGATGCGGCATTCTGTCGTAAACCTTACTTGGAAGTGCACATGCGCACACATACAGGCGAACGACCATTCCAGTGTGAACTCTGCCTCAAGCGTTTCACACAAAAATCTAGCCTCAACACACACAAACGCGTCCACACAGGGTACTGGGCGGGGCGAAAACCGTTTCCGTGCGAACAGTGCCCGGCGGCGTTCCGCAGTCGGCCCGTTCTGGCCGTGCATATGCGAACGCACACGGGCGAGCGACCTTACCAGTGCGACGTCTGCTCCAAATGCTTCACCCAAAACTCCAGTCTCACCGTACATAAGAGAATACACACCGACGAGCACATGCGCGCGCTGCTGGCTAAGGACCGGCCCTATCAGTGCGAGATTTGTCAGATGAGGTTCACCCAGAGCTCCAGCCTCAACAGACACAAGAAGATTCATACCGAGGAACACAGGCGTGCGCTGCTGGCCAAGGATCGGCCGTACCAGTGCGACATCTGCTATGTGCGATTCACGCAGAAGTCCAGCCTGGGGCGACACGGAAAAATACACACCGAGGAGCACATGCAGTCGCTAATCAACAAAGTGCGTCCGTTCGAATGTGACATCTGCGACAAGCGGTTCACTCAGAAGTCCAGCCTCGGCACGCATAAACGCATTCACACCGGTGGGTCCTTTTTACCTAAATATTTCCAAGACGGCGACGCAAACGTCGCGGTCGCGCGTAAGGCCCGCGCCAAAATTGCGACGAACGGAAAGAAACTCGCGGAATCGGCGATCGCGAAATTAGGCCTCGCCGCCGCGTCGCTCTGCGATTCCCGCTTTTGCCCGCGCGCGCAGCGGAGGCCCGGCGCCCCGCTCGCACGCGCTGACGCCGTCTCTCGCAGGCGAGCGGCCGTACGAGTGCGAGCGCTGCCTCAAGCGCTTCACGCAGAAGTCCAGCCTCAATATCCATATGCGAACGCACACAGGTGGGTGACGCTAGGCGTCGCGCGGCGCTCCCTCGCGACGCCCGCGACGCGAGAGCCTTTCGGACGCGCGAGCGAGCGCCCGCGACGCCCGTCCGTCTCGGCCCGACTAGCGGGCCCCCGCCACCCCCTAAAACGCGCTTTGCGTGCAGTCCAGGGCCGCCCGTTCCAGTGCCTCTCCTGCCCCGCCGCCTTCACCTGCAAGCAGTACCTCGAGATCCACAACCGCACGCACACGGGCGAGCGGCCCTACCAGTGCGACGTCTGCCTCAAGCGCTTCACCCAGAAGTCCAGCCTCAACATCCACAAGCGCACGCACTCAGTGCAGGGGAGGCCCTTCCAGTGCCTGCAGTGCCCGGCCGCGTTCACCTGCAAGCAGTACCTCGAGATCCACAACCGCACGCACACGGGAGAGCGGCCCTACCAGTGCGAGCTCTGCCTCAAGCGATTCGCCCAGAAGTCCACCTTGAATATCCACAAGCGCACGCACACAGTGCAAGGTCGGCCGTATCAGTGCTTGCAGTGTCCCGCCGCTTTCACCTGCAAACCGTACCTGGAGATCCATAACCGCACGCACACCGGCGAGCGGCCCTACCAGTGCGAGCTCTGCCTGAAGAGATTCACCCAGAAATCTACGCTCAACGTCCACAAGCGCATACACACCGGAGAAAGACCATATGCCTGTGATATTTGTCAGAAGAGATTCGCTGTGAAGAGCTACGTTGCAGCACACAGgcATCACAACCGCGTCCATCGAGAGAACCACAGCAACATGTCGGCCAACAGCATAACATCTACTATCAACAGTGTGGCGACCAACACGAATGTTAATAATGCATTTGATTCTCCAGGCGTTTGCGATTTGAGTTTTGTTCCTTTGGGGGGCCGATATACAAGTGTCGGCATTGGTCTGACTACACAAAGCACACAGGTTTCCATGCAGGATGATCATTCGGCCAAGATGGCTGGAATGTCACCTGCTTCCATAGGTGATTCATATACCACATCTCCTCCACCTCCTCATACGCCcacgccgcagccgcagccaCTAATGACACATCACACATCCACAGCCACAAATGACTCACCACAGATGGCACAAATGACATCTCAGCAGTCACAATTGACATCTCAGCAGGCACAATTGACATCTCAGCAGGCACAGTTGACATCTCAGCAGGCGTTGTCATTGACATCTCAGCGGGCACAACTGACATCTCAGCAGGCACAATTGACATCCCAGCAGGGACAATTGACACCTCAGCAGGCATTGTCATTGACATCTCAGCGGGCACAACTGACATCTCAGCAGACACAAATGACATCTCAGCAGGCACAGTTGTCATCTCAGCAGGCATTGTCATTGACATCTCAGCGAGCACAACTGACATCTCAGCAGGCACAATTAACATCTCAGCAGGGACAATTGACATCTCAGCAGGCATTGTCATTGGCGTCTCAGCAGGCATTGTCGTTGACATCTCAGCAGGCATTGTCATTGACATCTCAGCAGGCACAATTACAGTAA
Protein Sequence
MDWLLSLACRFYSSHPHIHSSSPALIRSEGNHAIVGLNLAQHEALQHAQQEALQHAQQEALQHAQQEALQHAQVEALQQAQQEALQHAQLEAAAAQLEEQQAVQSAQAQAQLEAAQQQLEEQQEMELQQQQELQQQQEDTKDSLLLQQQHRQLQHQQHELDQEELHSQVSQGIIGLSVQAKLEQGVGPGVVPQRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFACTVCDAAFCRKPYLEVHMRTHTGERPFQCELCLKRFTQKSSLNTHKRVHTGYWAGRKPFPCEQCPAAFRSRPVLAVHMRTHTGERPYQCDVCSKCFTQNSSLTVHKRIHTDEHMRALLAKDRPYQCEICQMRFTQSSSLNRHKKIHTEEHRRALLAKDRPYQCDICYVRFTQKSSLGRHGKIHTEEHMQSLINKVRPFECDICDKRFTQKSSLGTHKRIHTGGSFLPKYFQDGDANVAVARKARAKIATNGKKLAESAIAKLGLAAASLCDSRFCPRAQRRPGAPLARADAVSRRRAAVRVRALPQALHAEVQPQYPYANAHRWVTLGVARRSLATPATREPFGRASERPRRPSVSARLAGPRHPLKRALRAVQGRPFQCLSCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCELCLKRFAQKSTLNIHKRTHTVQGRPYQCLQCPAAFTCKPYLEIHNRTHTGERPYQCELCLKRFTQKSTLNVHKRIHTGERPYACDICQKRFAVKSYVAAHRHHNRVHRENHSNMSANSITSTINSVATNTNVNNAFDSPGVCDLSFVPLGGRYTSVGIGLTTQSTQVSMQDDHSAKMAGMSPASIGDSYTTSPPPPHTPTPQPQPLMTHHTSTATNDSPQMAQMTSQQSQLTSQQAQLTSQQAQLTSQQALSLTSQRAQLTSQQAQLTSQQGQLTPQQALSLTSQRAQLTSQQTQMTSQQAQLSSQQALSLTSQRAQLTSQQAQLTSQQGQLTSQQALSLASQQALSLTSQQALSLTSQQAQLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-