Maru008945.1
Basic Information
- Insect
- Micropterix aruncella
- Gene Symbol
- -
- Assembly
- GCA_944547385.1
- Location
- CALYMV010001372.1:156809-158707[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00063 0.038 15.6 1.3 2 23 88 110 87 110 0.92 2 18 8.6e-05 0.0052 18.3 0.3 1 23 115 138 115 138 0.89 3 18 1.4e-05 0.00086 20.8 0.3 1 23 144 167 144 167 0.95 4 18 0.00048 0.029 16.0 1.0 1 23 173 196 173 196 0.97 5 18 0.0017 0.1 14.2 0.1 1 23 202 225 202 225 0.90 6 18 1.9e-05 0.0011 20.4 0.2 1 23 231 254 231 254 0.95 7 18 0.00011 0.0066 18.0 1.5 1 23 260 283 260 283 0.92 8 18 0.0014 0.083 14.5 0.1 1 23 289 312 289 312 0.94 9 18 0.00011 0.0067 18.0 0.7 1 23 318 341 318 342 0.93 10 18 2.4e-05 0.0015 20.0 0.2 1 23 347 370 347 370 0.95 11 18 0.00011 0.0067 18.0 0.7 1 23 376 399 376 400 0.93 12 18 2.7e-05 0.0017 19.9 0.2 1 23 405 428 405 428 0.92 13 18 2.4e-05 0.0015 20.0 0.2 1 23 448 471 448 471 0.95 14 18 0.00011 0.0067 18.0 0.7 1 23 477 500 477 501 0.93 15 18 2.7e-05 0.0017 19.9 0.2 1 23 506 529 506 529 0.92 16 18 2.4e-05 0.0015 20.0 0.2 1 23 549 572 549 572 0.95 17 18 0.00011 0.0067 18.0 0.7 1 23 578 601 578 602 0.93 18 18 2.7e-05 0.0017 19.9 0.2 1 23 607 630 607 630 0.92
Sequence Information
- Coding Sequence
- ATGAGCGAAAAAAGTGTGGACGAGTACAGCAACGTGACTGTCAAAATTGAAGAATATGTCGCTATTAAAACGGAGGTCGATTCGGGCCTTACAAATTCGACTATTCCTCTAAGCGATTTCGTACCAGATGAACGAGAGAATGTACTCAAATTCGACGAGGTTGAGACTAGATTCGTAAAGCCAGAACCAATTGAAGGTGGACCGACTGGTAGTAGCAATATTAGTGATGTTATGACTAGCGGTGGACGAGTCAAATCACAAGTTTGCCCGAAGTGCGGCAGGACGTTTTCCTGTAAGAGTAAATTGAATATACACATTACTGGAGTTCATTTGCAATTGAAATTTCTTTGCGGTGAATGTGACCGCGCTTTCACAGAGAAGGGAAATTTGAAGAAGCATTTAGACGACACTCATCGTAAGTTGAAGAAGTTTATATGTGGCGTATGTGATCACGCTTTCGCAaggaaaagtaatttaaaagatCATTTGGCGTCAGTTCATAGTAAGCTGAAGAACTATTCATGTGGGGAATGCCATAGTGCTTTTAAACTGAAAGCAAATTTAAAGCAGCATTTGGACACAGTTCACAGGAAACTGACGAAATACGAATGTGAAGAATGCGATATGGCGTTTACACATCCAGGGCGTTTGAAAGGACATGTAGATGCAATTCACAGGGAATTAAAGAAACACTCATGTGGAGATTGTGACCGTGCTTTTTCAACGCAGGCAGCTTTGAAGATACATCTGGACTCCATTCATAGAAAGCTTAAGAAATACTCATGTAGAGAGTGCTATCGTGCTTTTACACAAAAAGGACATTTAAAGCAGCATTTGGACGCTATTCATCATAAGTGGAAGAGATTTGCATGTGGTGAATGTGATCGTGCATTTTCAGTGAAAGGCCGTTTAAATGAGCATTTAGACTCAGTTCACAGGAAGCTAAAGAGATACATATGTGGAGAATGCAACCGGGCTTTTACgattaaaagcaatttaaaAACGCATGTGGACAACGTTCATCATAAATTAAAGAGATTTATTTGCGGCGATTGTGGACGTGCATTTTCAGAGAAAGGCCATTTAAATGAGCATTTAGACTCAGTTCACAGGAAGCTAAAGAGATACATATGTGGAGAATGCAACCGGGCTTTTACgattaaaagcaatttaaaAACGCATGTGGACAACGTTCATCATAAATTAAAGAGATTTATTTGCGGCGATTGTGGACGTGCATTTTCAGAGAAACGAAGTTTAAAGAAGCATTTAGACGCCGTTCACAGGATAAAAAGCAATTTAAAAACGCATGTGGACAACGTTCATCATAAATTAAAGAGATTTATTTGCGGCGATTGTGGACGTGCATTTTCAGAGAAAGGCCATTTAAATGAGCATTTAGACTCAGTTCACAGGAAGCTAAAGAGATACATATGTGGAGAATGCAACCGGGCTTTTACgattaaaagcaatttaaaAACGCATGTGGACAACGTTCATCATAAATTAAAGAGATTTATTTGCGGCGATTGTGGACGTGCATTTTCAGAGAAACGAAGTTTAAAGAAGCATTTAGACGCCGTTCACAGGATAAAAAGCAATTTAAAAACGCATGTGGACAACGTTCATCATAAATTAAAGAGATTTATTTGCGGCGATTGTGGACGTGCATTTTCAGAGAAAGGCCATTTAAATGAGCATTTAGACTCAGTTCACAGGAAGCTAAAGAGATACATATGTGGAGAATGCAACCGGGCTTTTACgattaaaagcaatttaaaAACGCATGTGGACAACGTTCATCATAAATTAAAGAGATTTATTTGCGGCGATTGTGGACGTGCATTTTCAGAGAAACGAAGTTTAAAGAAGCATTTAGACGCCGTTCACAGGAAATAG
- Protein Sequence
- MSEKSVDEYSNVTVKIEEYVAIKTEVDSGLTNSTIPLSDFVPDERENVLKFDEVETRFVKPEPIEGGPTGSSNISDVMTSGGRVKSQVCPKCGRTFSCKSKLNIHITGVHLQLKFLCGECDRAFTEKGNLKKHLDDTHRKLKKFICGVCDHAFARKSNLKDHLASVHSKLKNYSCGECHSAFKLKANLKQHLDTVHRKLTKYECEECDMAFTHPGRLKGHVDAIHRELKKHSCGDCDRAFSTQAALKIHLDSIHRKLKKYSCRECYRAFTQKGHLKQHLDAIHHKWKRFACGECDRAFSVKGRLNEHLDSVHRKLKRYICGECNRAFTIKSNLKTHVDNVHHKLKRFICGDCGRAFSEKGHLNEHLDSVHRKLKRYICGECNRAFTIKSNLKTHVDNVHHKLKRFICGDCGRAFSEKRSLKKHLDAVHRIKSNLKTHVDNVHHKLKRFICGDCGRAFSEKGHLNEHLDSVHRKLKRYICGECNRAFTIKSNLKTHVDNVHHKLKRFICGDCGRAFSEKRSLKKHLDAVHRIKSNLKTHVDNVHHKLKRFICGDCGRAFSEKGHLNEHLDSVHRKLKRYICGECNRAFTIKSNLKTHVDNVHHKLKRFICGDCGRAFSEKRSLKKHLDAVHRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -