Maru032438.1
Basic Information
- Insect
- Micropterix aruncella
- Gene Symbol
- -
- Assembly
- GCA_944547385.1
- Location
- CALYMV010007866.1:3558-18958[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.0011 0.066 14.8 1.1 1 21 119 139 119 142 0.95 2 25 1.4e-05 0.00088 20.7 2.3 1 23 148 171 148 171 0.98 3 25 4.6e-05 0.0028 19.2 0.9 1 23 177 200 177 200 0.94 4 25 8.4e-05 0.0051 18.3 1.3 1 23 215 238 215 238 0.95 5 25 0.00097 0.059 15.0 0.6 1 23 244 267 244 267 0.97 6 25 0.0011 0.066 14.8 1.1 1 21 399 419 399 422 0.95 7 25 1.4e-05 0.00088 20.7 2.3 1 23 428 451 428 451 0.98 8 25 4.6e-05 0.0028 19.2 0.9 1 23 457 480 457 480 0.94 9 25 8.4e-05 0.0051 18.3 1.3 1 23 495 518 495 518 0.95 10 25 0.00097 0.059 15.0 0.6 1 23 524 547 524 547 0.97 11 25 0.0011 0.066 14.8 1.1 1 21 679 699 679 702 0.95 12 25 1.4e-05 0.00088 20.7 2.3 1 23 708 731 708 731 0.98 13 25 4.6e-05 0.0028 19.2 0.9 1 23 737 760 737 760 0.94 14 25 8.4e-05 0.0051 18.3 1.3 1 23 775 798 775 798 0.95 15 25 0.00097 0.059 15.0 0.6 1 23 804 827 804 827 0.97 16 25 0.0019 0.11 14.1 0.7 1 21 959 979 959 982 0.95 17 25 1.4e-05 0.00088 20.7 2.3 1 23 988 1011 988 1011 0.98 18 25 4.6e-05 0.0028 19.2 0.9 1 23 1017 1040 1017 1040 0.94 19 25 8.4e-05 0.0051 18.3 1.3 1 23 1055 1078 1055 1078 0.95 20 25 0.00097 0.059 15.0 0.6 1 23 1084 1107 1084 1107 0.97 21 25 0.0011 0.066 14.8 1.1 1 21 1239 1259 1239 1262 0.95 22 25 1.4e-05 0.00088 20.7 2.3 1 23 1268 1291 1268 1291 0.98 23 25 4.6e-05 0.0028 19.2 0.9 1 23 1297 1320 1297 1320 0.94 24 25 8.4e-05 0.0051 18.3 1.3 1 23 1335 1358 1335 1358 0.95 25 25 0.00097 0.059 15.0 0.6 1 23 1364 1387 1364 1387 0.97
Sequence Information
- Coding Sequence
- ATGGAGCACCGTAACGACGTGCGATTCAACGAAGACCTCGAAGTTTCTAACAAAAATTTACTGTTCGGCGCCCCGGTTAAGACGGAATGGGAAATTTCGCCGGTGAAGCGGGAGAATTTTACGACTGAAGAAGTGAAATTCCTGAAGCCGGAGCCCCGCAGCGACGCCTCCACGACCAGAGATGATTTCAGCGGGAAATTGTTTGTAAATTTACGAAAACTGGAGCGTTTAAAATGTTTGGAATGCGGCGATGagttaattaatgtttttgtcgAGTTGAATTGTGCCAATAACGAATGGGTAATGAAGTGTCACGATTGTCACGCTCAATCTGTGAAAATCATGTCTTTGAAATATGCCTGTGAGTTATGCGATAGTACGTTTAAAAGAAAAGGGGATTTGACGGTTCACATCAAGTGTATACACGAAAAATCAGTATTCTTTGAATGCGACAAGTGTCCAGCCAAGTTCGTGAGAAAGAACCACTTGAATCGTCACTTAAGACGAGTGCACACTCGTGTCAGACCTTTCAACTGTCCCAAATGCGATAAAACCTTTAAATATAAAGAAGGACTTAAGATTCACTCGGATACCATACATCTAGGATTGAACCTTTATCCGAAGATTCGAACCTCTGTACGTTATTCCTGTGAAAAATGTGACAAAACCTTCACGATGAGGAATTCGTTGGTGAGGCACGTCAatgaaaaacataataaatcaaAGTCGTACAATTGTGAGAAATGTGGAAGGTCGTTCTTGAGGAAACAAGAATTGAACGGTCATACACGCGTTATACACGGGCAGCAACGGAAGTTTGTATGCAATCTATGCGATCggaaagaaaaacctaaccacGTGCGATTCAACGAAGACCTCGAAGTTTCTAACAAAAATTTACTGTTCGGCGCCCCGGTTAAGACGGAATGGGAAATTTCGCCGGTGAAGCGGGAGAATTTTACGACTGAAGAAGTGAAATTCCTGAAGCCGGAGCCCCGCAGCGACGCCTCCACGACCAGAGATGATTTCAGCGGGAAATTGTTTGTAAATTTACGAAAACTGGAGCGTTTAAAATGTTTGGAATGCGGCGATGagttaattaatgtttttgtcgAGTTGAATTGTGCCAATAACGAATGGGTAATGAAGTGTCACGATTGTCACGCTCAATCTGTGAAAATCATGTCTTTGAAATATGCCTGTGAGTTATGCGATAGTACGTTTAAAAGAAAAGGGGATTTGACGGTTCACATCAAGTGTATACACGAAAAATCAGTATTCTTTGAATGCGACAAGTGTCCAGCCAAGTTCGTGAGAAAGAACCACTTGAATCGTCACTTAAGACGAGTGCACACTCGTGTCAGACCTTTCAACTGTCCCAAATGCGATAAAACCTTTAAATATAAAGAAGGACTTAAGATTCACTCGGATACCATACATCTAGGATTGAACCTTTATCCGAAGATTCGAACCTCTGTACGTTATTCCTGTGAAAAATGTGACAAAACCTTCACGATGAGGAATTCGTTGGTGAGGCACGTCAatgaaaaacataataaatcaaAGTCGTACAATTGTGAGAAATGTGGAAGGTCGTTCTTGAGGAAACAAGAATTGAACGGTCATACACGCGTTATACACGGGCAGCAACGGAAGTTTGTATGCAATCTATGCGATCggaaagaaaaacctaaccacGTGCGATTCAACGAAGACCTCGAAGTTTCTAACAAAAATTTACTGTTCGGCGCCCCGGTTAAGACGGAATGGGAAATTTCGCCGGTGAAGCGGGAGAATTTTACGACTGAAGAAGTGAAATTCCTGAAGCCGGAGCCCCGCAGCGACGCCTCCACGACCAGAGATGATTTCAGCGGGAAATTGTTTGTAAATTTACGAAAACTGGAGCGTTTAAAATGTTTGGAATGCGGCGATGagttaattaatgtttttgtcgAGTTGAATTGTGCCAATAACGAATGGGTAATGAAGTGTCACGATTGTCACGCTCAATCTGTGAAAATCATGTCTTTGAAATATGCCTGTGAGTTATGCGATAGTACGTTTAAAAGAAAAGGGGATTTGACGGTTCACATCAAGTGTATACACGAAAAATCAGTATTCTTTGAATGCGACAAGTGTCCAGCCAAGTTCGTGAGAAAGAACCACTTGAATCGTCACTTAAGACGAGTGCACACTCGTGTCAGACCTTTCAACTGTCCCAAATGCGATAAAACCTTTAAATATAAAGAAGGACTTAAGATTCACTCGGATACCATACATCTAGGATTGAACCTTTATCCGAAGATTCGAACCTCTGTACGTTATTCCTGTGAAAAATGTGACAAAACCTTCACGATGAGGAATTCGTTGGTGAGGCACGTCAatgaaaaacataataaatcaaAGTCGTACAATTGTGAGAAATGTGGAAGGTCGTTCTTGAGGAAACAAGAATTGAACGGTCATACACGCGTTATACACGGGCAGCAACGGAAGTTTGTATGCAATCTATGCGATCggaaagaaaaacctaaccacGTGCGATTCAACGAAGACCTCGAAGTTTCTAACAAAAATTTACTGTTCGGCGCCCCGGTTAAGACGGAATGGGAAATTTCGCCGGTGAAGCGGGAGAATTTTACGACTGAAGAAGTGAAATTCCTGAAGCCGGAGCCCCGCAGCGACGCCTCCACGACCAGAGATGATTTCAGCGGGAAATTGTTTGTAAATTTACGAAAACTGGAGCGTTTAAAATGTTTGGAATGCGGCGATGagttaattaatgtttttgtcgAGTTGAATTGTGCCAATAACGAATGGGTAATGAAGTGTCACGATTGTCACGCTCAATCTGTGAAAATCATGTCTTTGAAATATGCCTGTGAGTTATGCGATAGTGCGTTTAAAAGAAAAGGAGATTTGACGGTTCACATCAAGTGTATACACGAAAAATCAGTATTCTTTGAATGCGACAAGTGTCCAGCCAAGTTCGTGAGAAAGAACCACTTGAATCGTCACTTAAGACGAGTGCACACTCGTGTCAGACCTTTCAACTGTCCCAAATGCGATAAAACCTTTAAATATAAAGAAGGACTTAAGATTCACTCGGATACCATACATCTAGGATTGAACCTTTATCCGAAGATTCGAACCTCTGTACGTTATTCCTGTGAAAAATGTGACAAAACCTTCACGATGAGGAATTCGTTGGTGAGGCACGTCAatgaaaaacataataaatcaaAGTCGTACAATTGTGAGAAATGTGGAAGGTCGTTCTTGAGGAAACAAGAATTGAACGGTCATACACGCGTTATACACGGGCAGCAACGGAAGTTTGTATGCAATCTATGCGATCggaaagaaaaacctaaccacGTGCGATTCAACGAAGACCTCGAAGTTTCTAACAAAAATTTACTGTTCGGCGCCCCGGTTAAGACGGAATGGGAAATTTCGCCGGTGAAGCGGGAGAATTTTACGACTGAAGAAGTGAAATTCCTGAAGCCGGAGCCCCGCAGCGACGCCTCCACGACCAGAGATGATTTCAGCGGGAAATTGTTTGTAAATTTACGAAAACTGGAGCGTTTAAAATGTTTGGAATGCGGCGATGagttaattaatgtttttgtcgAGTTGAATTGTGCCAATAACGAATGGGTAATGAAGTGTCACGATTGTCACGCTCAATCTGTGAAAATCATGTCTTTGAAATATGCCTGTGAGTTATGCGATAGTACGTTTAAAAGAAAAGGGGATTTGACGGTTCACATCAAGTGTATACACGAAAAATCAGTATTCTTTGAATGCGACAAGTGTCCAGCCAAGTTCGTGAGAAAGAACCACTTGAATCGTCACTTAAGACGAGTGCACACTCGTGTCAGACCTTTCAACTGTCCCAAATGCGATAAAACCTTTAAATATAAAGAAGGACTTAAGATTCACTCGGATACCATACATCTAGGATTGAACCTTTATCCGAAGATTCGAACCTCTGTACGTTATTCCTGTGAAAAATGTGACAAAACCTTCACGATGAGGAATTCGTTGGTGAGGCACGTCAatgaaaaacataataaatcaaAGTCGTACAATTGTGAGAAATGTGGAAGGTCGTTCTTGAGGAAACAAGAATTGAACGGTCATACACGCGTTATACACGGGCAGCAACGGAAGTTTGTATGCAATCTATGCGATCataTATACTTGGTAGCGATGCAGGAGGTGACTGCATCACCGGCGGAGGACTCATTGGTGAAAAGAGAGAGCTATCAATGGCAACATTCTCATCAGGCTCTTCATCCGAGGAACCTTCCTCCGCTGTTTGGTTGA
- Protein Sequence
- MEHRNDVRFNEDLEVSNKNLLFGAPVKTEWEISPVKRENFTTEEVKFLKPEPRSDASTTRDDFSGKLFVNLRKLERLKCLECGDELINVFVELNCANNEWVMKCHDCHAQSVKIMSLKYACELCDSTFKRKGDLTVHIKCIHEKSVFFECDKCPAKFVRKNHLNRHLRRVHTRVRPFNCPKCDKTFKYKEGLKIHSDTIHLGLNLYPKIRTSVRYSCEKCDKTFTMRNSLVRHVNEKHNKSKSYNCEKCGRSFLRKQELNGHTRVIHGQQRKFVCNLCDRKEKPNHVRFNEDLEVSNKNLLFGAPVKTEWEISPVKRENFTTEEVKFLKPEPRSDASTTRDDFSGKLFVNLRKLERLKCLECGDELINVFVELNCANNEWVMKCHDCHAQSVKIMSLKYACELCDSTFKRKGDLTVHIKCIHEKSVFFECDKCPAKFVRKNHLNRHLRRVHTRVRPFNCPKCDKTFKYKEGLKIHSDTIHLGLNLYPKIRTSVRYSCEKCDKTFTMRNSLVRHVNEKHNKSKSYNCEKCGRSFLRKQELNGHTRVIHGQQRKFVCNLCDRKEKPNHVRFNEDLEVSNKNLLFGAPVKTEWEISPVKRENFTTEEVKFLKPEPRSDASTTRDDFSGKLFVNLRKLERLKCLECGDELINVFVELNCANNEWVMKCHDCHAQSVKIMSLKYACELCDSTFKRKGDLTVHIKCIHEKSVFFECDKCPAKFVRKNHLNRHLRRVHTRVRPFNCPKCDKTFKYKEGLKIHSDTIHLGLNLYPKIRTSVRYSCEKCDKTFTMRNSLVRHVNEKHNKSKSYNCEKCGRSFLRKQELNGHTRVIHGQQRKFVCNLCDRKEKPNHVRFNEDLEVSNKNLLFGAPVKTEWEISPVKRENFTTEEVKFLKPEPRSDASTTRDDFSGKLFVNLRKLERLKCLECGDELINVFVELNCANNEWVMKCHDCHAQSVKIMSLKYACELCDSAFKRKGDLTVHIKCIHEKSVFFECDKCPAKFVRKNHLNRHLRRVHTRVRPFNCPKCDKTFKYKEGLKIHSDTIHLGLNLYPKIRTSVRYSCEKCDKTFTMRNSLVRHVNEKHNKSKSYNCEKCGRSFLRKQELNGHTRVIHGQQRKFVCNLCDRKEKPNHVRFNEDLEVSNKNLLFGAPVKTEWEISPVKRENFTTEEVKFLKPEPRSDASTTRDDFSGKLFVNLRKLERLKCLECGDELINVFVELNCANNEWVMKCHDCHAQSVKIMSLKYACELCDSTFKRKGDLTVHIKCIHEKSVFFECDKCPAKFVRKNHLNRHLRRVHTRVRPFNCPKCDKTFKYKEGLKIHSDTIHLGLNLYPKIRTSVRYSCEKCDKTFTMRNSLVRHVNEKHNKSKSYNCEKCGRSFLRKQELNGHTRVIHGQQRKFVCNLCDHIYLVAMQEVTASPAEDSLVKRESYQWQHSHQALHPRNLPPLFG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -