Maru007340.1
Basic Information
- Insect
- Micropterix aruncella
- Gene Symbol
- -
- Assembly
- GCA_944547385.1
- Location
- CALYMV010001077.1:30095-32266[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 8.2e-06 0.00049 21.5 1.6 1 23 88 111 88 111 0.95 2 22 1.3e-05 0.00077 20.9 0.2 1 23 116 139 116 139 0.93 3 22 2e-05 0.0012 20.3 0.1 1 23 145 168 145 168 0.92 4 22 0.0019 0.11 14.1 0.2 1 23 174 197 174 197 0.90 5 22 3.8e-05 0.0023 19.4 0.3 1 23 203 226 203 226 0.96 6 22 0.014 0.83 11.4 0.4 2 23 233 255 232 255 0.89 7 22 8.7e-06 0.00053 21.4 0.2 1 23 261 284 261 284 0.93 8 22 3.5e-05 0.0021 19.5 0.2 1 23 290 313 290 313 0.92 9 22 1.6e-06 9.7e-05 23.7 0.4 1 23 319 342 319 342 0.97 10 22 0.2 12 7.7 0.0 5 20 352 367 350 369 0.93 11 22 0.0041 0.25 13.0 0.8 1 23 377 400 377 400 0.90 12 22 8.7e-06 0.00053 21.4 0.2 1 23 406 429 406 429 0.93 13 22 3.5e-05 0.0021 19.5 0.2 1 23 435 458 435 458 0.92 14 22 1.6e-06 9.7e-05 23.7 0.4 1 23 464 487 464 487 0.97 15 22 0.2 12 7.7 0.0 5 20 497 512 495 514 0.93 16 22 0.0019 0.11 14.1 0.1 1 23 522 545 522 545 0.90 17 22 8.7e-06 0.00053 21.4 0.2 1 23 551 574 551 574 0.93 18 22 3.5e-05 0.0021 19.5 0.2 1 23 580 603 580 603 0.92 19 22 0.00091 0.055 15.1 0.1 1 23 608 631 608 631 0.90 20 22 0.0041 0.25 13.0 0.8 1 23 637 660 637 660 0.90 21 22 0.024 1.5 10.6 0.1 1 23 666 689 666 689 0.90 22 22 1.5e-06 9e-05 23.9 1.1 1 23 695 718 695 718 0.93
Sequence Information
- Coding Sequence
- ATGAGTGCTCTAATTGTGGACGATTACAGAACCGTAACTGTCAAGATTGAGGAAAATGTCATGGTTAAAAATGAGGACTACGATTCTGATGATTCAGACTTCAATATTCCTCTGAGCGACTTCACACCGGATGAGCGAGGTAACGTGGTCGAATTCTACGATAGCGAACAACGTGTCATAAAACCGGAACCAATCGAAGGTGGACCATCTGGGAGCAGTAACATTGGCGACAGCGGGTTTAGTGTAGGACGTGTCAAATCGCATATTTGTCTGCAGTGCGATAAGACGTTCTCTAAGAAGGTTAATTTAAATCGACATATCGAAAGTGTTCATGACAACAAGATATACCCGTGTGGAGAATGCGGTCATGCTTTTACAAGGCAGTGGACTTTGAAAAAACACATAGATGCAGTTCACAGAAAGTTGAAAAAATACCCATGTGAAGAATGCGATCAAGCTTTTACACGGCAAGGACATTTGAAAGGACACATAGACGCAGTTCACAGGAAACTTAAGAAATACTTATGTGGAGATTGCGATCGTGCGTTCACAGAGAAAAGTAAATTTAAAGGACACATAGATGCAGTTCACAGGAAATGGAATCAATTCCCGTGTGAAGAATGCGATCGTGGTTTTACAGATAAAAAGACGTTCAAAATACATATAGACTCGGTTCACAAGAAATTGAAGAGACAATCATGTGGGCTATGTGATAATGCTTTTGCAAGTCAATGCGATTTGAAAAGACACGTAGACGCAGTTCAtttgaaattgaagaaatactcatgtGGAGATTGCGATCGTGCGTTCACAGGGAAAAGTAAGTTGAAAAGACACATAGACGCAGTTCACAGAAAGTTGAAAAAATACCCATGTGAAAAATGCGATCAAGCTTTTACACAGCAAGGGCATTTGAAAGGACACATAGACGCAGTTCACAGGAAACTTAAGAAATATTCATGTGGAGATTGCGATCGTGCGTTCACAGAGAAAAGTAAGTTGAAAAGACACATAGACACAGTTCACAGGAAATGGAATCAATTCCCATCTGAAGAATGCGATCGTGGTTTTATAGATAAAAAGACTTTCAAAATACATATAGACGCGGTTGACAAGAAATTGAAGAGACACTCATGTGGGGTATGTGATAATGCTTTTGCAAGTCAATGCGATTTGAAAAGACACGTAGACGCCGTTCAtttgaaattgaagaaatactcatgtGGAGATTGCGATCGTGCGTTCACAGGGAAAAGTAAGTTGAAAAGACACATAGACGCAGTTCACAGAAAGTTGAAAAAATACCCATGTGAAAAATGCGATCAAGCTTTTACACAGCAAGGGCATTTGAAAGGACACATAGACGCAGTTCACAGGAAACTTAAGAAATATTCATGTGGAGATTGCGATCGTGCGTTCACAGAGAAAAGTAAGTTGAAAAGACACATAGACACAGTTCACAGGAAATGGAATCAATTCCCATCTGAAGAATGCGATCGTGGTTTTATAGATAAAAAGACTTTCAAAATACATATAGACGCGGTTGACAAGAAATTGAAGAGACACTCATGTGGGGTATGTGATAATGCTTTTGCAAGTCAATGGGATTTGAAAAGACACGTAGACGCAGTTCAtttgaaattgaagaaatactcatgtGGAGATTGCGATCGTGCGTTCACAGGGAAAAGTAAGTTGAAAAGACACATAGACGCAGTTCACAGAAAGTTGAAAAAATACCCATGTGAAAAATGCGATCAAGCTTTTACACAGCAAGGGCATTTGAAAGGACACATAGACGCAGTTCACAGGAAACGCAGACACTCATGTGGGGTATGTGATAATGCTTTTGCAAGTCAAAGCGGTTTGAAAAGACACGTAGACGCAGTTCACAAGAAATTGAAGAGACACTCATGTGGGGTATGTGATAATGCTTTTGCAAGTCAATGCGATTTGAAAAGACACGTAGACGCAGTTCACTTGAAATTCAAGAAATACTCATGTGGAGAATGCAATCGTAATTTTACACGGCAATTGATTTTGACAGGACacataaatgcagttcacagaaaattaaacaaatattcaTGTGGAGATTGCGATCGTTGTTTTACACAGAAAGCCAGTTTGAAACGGCACATAGATGCAGTTCACATGAATTTGAAGAGATAA
- Protein Sequence
- MSALIVDDYRTVTVKIEENVMVKNEDYDSDDSDFNIPLSDFTPDERGNVVEFYDSEQRVIKPEPIEGGPSGSSNIGDSGFSVGRVKSHICLQCDKTFSKKVNLNRHIESVHDNKIYPCGECGHAFTRQWTLKKHIDAVHRKLKKYPCEECDQAFTRQGHLKGHIDAVHRKLKKYLCGDCDRAFTEKSKFKGHIDAVHRKWNQFPCEECDRGFTDKKTFKIHIDSVHKKLKRQSCGLCDNAFASQCDLKRHVDAVHLKLKKYSCGDCDRAFTGKSKLKRHIDAVHRKLKKYPCEKCDQAFTQQGHLKGHIDAVHRKLKKYSCGDCDRAFTEKSKLKRHIDTVHRKWNQFPSEECDRGFIDKKTFKIHIDAVDKKLKRHSCGVCDNAFASQCDLKRHVDAVHLKLKKYSCGDCDRAFTGKSKLKRHIDAVHRKLKKYPCEKCDQAFTQQGHLKGHIDAVHRKLKKYSCGDCDRAFTEKSKLKRHIDTVHRKWNQFPSEECDRGFIDKKTFKIHIDAVDKKLKRHSCGVCDNAFASQWDLKRHVDAVHLKLKKYSCGDCDRAFTGKSKLKRHIDAVHRKLKKYPCEKCDQAFTQQGHLKGHIDAVHRKRRHSCGVCDNAFASQSGLKRHVDAVHKKLKRHSCGVCDNAFASQCDLKRHVDAVHLKFKKYSCGECNRNFTRQLILTGHINAVHRKLNKYSCGDCDRCFTQKASLKRHIDAVHMNLKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -