Basic Information

Gene Symbol
-
Assembly
GCA_944547385.1
Location
CALYMV010006413.1:125316-132361[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 1.1 2.2e+03 0.0 0.0 22 43 70 92 68 95 0.90
2 5 4.7e-06 0.0093 17.2 0.0 1 42 101 144 101 147 0.84
3 5 3.1e-08 6e-05 24.2 0.1 3 43 156 200 154 203 0.96
4 5 1.3e-05 0.026 15.8 0.0 1 41 209 250 209 255 0.94
5 5 7.1e-09 1.4e-05 26.3 0.0 1 45 258 306 258 307 0.90

Sequence Information

Coding Sequence
ATGTCCAGTGTTTTCAACGATGTAAATCCGAAATCTGACTCGGCATTTGCAGTGATGGGAAAGAAGAAGTTGATCGAACGCAATATCCGCGATTTAGAACGAAAGCCCAAACATTCGAAGGCGAAGCTGAAACGATTGCATAAAGAGTTGATGGACGTTGATCGATTGCCGCTGGCCAAAGTGGCGTTTCCCATCGACGCTGAATACGATTGGGAGGTCATCGTCAAGAGCCTGGACTACCGCCATAGCGACAGCGAAGTGGCCTCACTGTGGCGTCTCTTTCTGCATCCGTCGCTCAACAAGGAGCCGTTCACGGAGAGCGAGAAGAAGAAGCTGGAATCGCTCGCGTTGGCCCGCAACGAGCAGGACTGGGATGGAGTCGCTTCTGAATTGAATACGAACCGCTCGTCGTACCAGTGCTTTGTGTATTACGCTCAGGAAATATGGCAGTATAAGAAAGGGCTGCGGTGGACCAGCGAGGAGGATGAGGCATTGAAGTACATAGTCGATTCGTGCAGAATCGGTAATTATGTGCCATGGACAAAAGTGGCGTTTTTCAGTGGCAATCGAAGCCGAAGgCAGGTGTACAATCGATGGTTTTATAGTCTACAACCGGAGATACATAAGGGACCGTTTACAGATGCGGAGGATCGCGTGATTGTCGCCGCTCTGGAAAAATACGGCAAGACTGAAACTGCAAAGCTCGGACCGCTGCTTAAACACCGCTCCAGCAACCAGATCCAGCGCCACGTCATCCGCCTCAGGAAAAAGCGAAGGACGTGGACCACTGACGAAGACTTGCTCTTGCTCAAGCACGTGAAAGAGCAGGATAACCTCACAAAACGTTCATTTACGTCGCTCGGGCAGTTCCTACCGGGGAGAAACCCCCACCAGATACGGTTGCGTCTGAACCGGTTGCAGCGTTGGTTCACGGCGAATCCGAATATGTACGTGGAAGACGCTCCTCGCCGCTCGGCCGCAGCGCTCTCGCTCTATTCCGAAATAAAGAAAAGCTTCGGCGGTAAAATAGACCTGGATGCGGCGATAAAAGAGCTAAACGAAGAACTGAGCGCTGAGAAGTGCGATGATACAGCGGTTAAAACAAGTGCAGAGGACGAATCCGACCAAATCGATTCGGAACTAATAACGTACTTCATATTCGAGAAAGCGGAACAGAAAGAGAAGAAGCCAAAGTTGTCCGCTTTGAACCTATTCCAAATCCTAGCGCTTTTAAAGGCGGATCTCTCCCAAAAGGCGAGGGATAAGATCGACCCGGATAAATACTGGGAACCTCATCTGGTTGCCGGATTGAACGCAGCGCAACCGATGGCCGCGAACGAACCCCTTGTCAGGACGTAcgggaagaagaaggaagaaaCTCCCATCGCCATGTTGTTCCCGTTGATCGCGTTTCTGCCGCCTTCGCTCGAGACCCTACTCGGGTACGAGAGACTGAAGACTTATATTCGTGTCGCCGAACCCTACTATAACAGAATTAAAGAAGAGCAACGAAAGATAACTGTGACTCTGCGAAACGATGCCTCACAGCTGTGGGAAGAGCGATTCGAGTCGGCGCTCTTCTGGCCTGTATTTTTGTCCACAATGAATAAAcgcaaaaaataa
Protein Sequence
MSSVFNDVNPKSDSAFAVMGKKKLIERNIRDLERKPKHSKAKLKRLHKELMDVDRLPLAKVAFPIDAEYDWEVIVKSLDYRHSDSEVASLWRLFLHPSLNKEPFTESEKKKLESLALARNEQDWDGVASELNTNRSSYQCFVYYAQEIWQYKKGLRWTSEEDEALKYIVDSCRIGNYVPWTKVAFFSGNRSRRQVYNRWFYSLQPEIHKGPFTDAEDRVIVAALEKYGKTETAKLGPLLKHRSSNQIQRHVIRLRKKRRTWTTDEDLLLLKHVKEQDNLTKRSFTSLGQFLPGRNPHQIRLRLNRLQRWFTANPNMYVEDAPRRSAAALSLYSEIKKSFGGKIDLDAAIKELNEELSAEKCDDTAVKTSAEDESDQIDSELITYFIFEKAEQKEKKPKLSALNLFQILALLKADLSQKARDKIDPDKYWEPHLVAGLNAAQPMAANEPLVRTYGKKKEETPIAMLFPLIAFLPPSLETLLGYERLKTYIRVAEPYYNRIKEEQRKITVTLRNDASQLWEERFESALFWPVFLSTMNKRKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-