Maru013677.1
Basic Information
- Insect
- Micropterix aruncella
- Gene Symbol
- -
- Assembly
- GCA_944547385.1
- Location
- CALYMV010002186.1:9169-9801[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.2e-07 7.5e-05 23.5 0.0 8 43 17 52 15 53 0.90
Sequence Information
- Coding Sequence
- atgtCACCCAAGGTTGAGAAGAAATACTCGCAGAAGTCTTCAGAAACAGCAGTGAAGCTTATAAAGTCGAACGCAATTTCGTTACATCGGGCCAGCCTACAATTTGGAATACCAAAGGGAACTTTGCACAACAAGGTGCGAGGCAAAGTTCCACTGGAGTGTAAAAAAGGTCCTGCCACAATATTAACGGATCATGAGGAGAATAAACTCGCGACATGGATAATAAACATGGCCAAAATTGGATATGCTATGAATATCGAAGACGTTAAGGATTCTGTTCAACACTTCATGGAGAATTCCATCAGAGCAAAAGAATTTCCGGGTGGGCGGCCAGGAAGAAAATGGATATGCCTGTTCTTAAATAGACACCCTAACATTACCAAGAGAAATACCGAGATTATTTCCCGTTCTAGAGCCGTGATAAGTGAGAAGATGACCAGAGAATGGTTTCAAGCCCTAAAGACGTACCTAGATCAAGAGAACCAATTAGACATTCTCAACGACCCACGCCGCATCTTTAATTCAGATGAGacaggaattcaactctgcccAAAATCAGGAGTCGTACTAGGATCAAAAAGTTATCGGAATACGTACGTATTGCAAAGGAGAAAGAATGTATCACCACCCTGA
- Protein Sequence
- MSPKVEKKYSQKSSETAVKLIKSNAISLHRASLQFGIPKGTLHNKVRGKVPLECKKGPATILTDHEENKLATWIINMAKIGYAMNIEDVKDSVQHFMENSIRAKEFPGGRPGRKWICLFLNRHPNITKRNTEIISRSRAVISEKMTREWFQALKTYLDQENQLDILNDPRRIFNSDETGIQLCPKSGVVLGSKSYRNTYVLQRRKNVSPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01007267; iTF_01007270; iTF_01007271; iTF_01007275; iTF_01007277; iTF_01007283; iTF_01007287; iTF_01007279;
- 90% Identity
- iTF_01007279;
- 80% Identity
- -