Basic Information

Insect: Micropterix aruncella
Gene Symbol: clz9
Assembly: GCA_944547385.1
Location: CALYMV010008332.1:38587-41577[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.9e-07 3e-05 24.8 0.0 1 43 10 51 10 52 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.9e-07	3e-05	24.8	0.0	1	43	10	51	10	52	0.91

Sequence Information

Coding Sequence: ATGGTGCCAAgaccaagaaaaaaatacacccAAGATGACTTAAAACTGGCGCTTCATCAAATCAGAAACGGAGACTCTGTGTACAAAACGGGAAAAAAATTCGGGATTCCGGAATCCACGTTACGGGATAAAATACGCAACCGGTACAAATTGAAATGTGGTCGGCCTACACTATTCAGTGAAGAACAAGAAAAACTGCTTGTAAATTGGGCTACTACATTGGGTGACAGAGGATTTCCTGTCACGAAGGAACAGTTCTTGTTTAACGTGGGAAATCTTTTAAAAAGGTTGCACCCaacaagaaaaaaatgtgtACCGGGAAAAAGATGGTACAATAACTTTATGTCGCGTAACAAATCTCTGTCCAGGCGAGTCTGTCAATCACTAACAAGACCACGCAGCAAAATAACTATAAACACGTTACGAGAATGGTTTGAAAAGGTTAAGACCTATTTCGAACAAAATAACATCACAGACATTCTCAGCGATCCAACACGAATTTACAACTGCGATGAGACAGCTTTTTTCCTGAGCCCTAAAGGAAACGACGTTCTCGTAAGGAAAGGATCAAAGAAAGTCTACAGTAGGAGCGCTAATGACGATAAAGAATGCCTAACAGTCTTAGTAACTGTCGCCGCATCTGGAGATGTGGCACCGCCTATGGTTCTATTTCCATATAAAAAGAGACTTCCACCTGGGTTGCCTGATTCGACTCCTAAGGGATGGGGAGTAGGTCATTCAGAGAATGGTTGGATGACCCAGGAAACTTTTTTCGAGTATCTGGCGAATGTTTTTCACCCATGGCTGCTCAAGAAGGATATACATTTTCCTACAGTCCTCTTTTTAGATGGTCATACTTCCCATATATCACTAGAACTTAACGAGTTTTGCAGGGACAACCAAATAATACTAGTGGCACTTGTACCCAATGCAACACACTTAATGCAGCCACTCGATGTGGCTGCGTTTCGCCCCGTGAAGGGTATTTGGAAAAGTGTGGTTCACCAATTCAAAGTTGAAAATAACTTTGAAAAAGTTAGAAGGGTAGACTTTTGCAGTCTGGTTAAAACATGCTTAGACCAGGCATTAAAAAAGCAAACCATACAGAACGGATTCAAAAGCTGTGGTCTGTACCCTTTTGATGTAACACGGATTGACATGTCAATGCTAATAAGTGAGACGTCAGAATATAATCATaatacaatcattcaaaataaggaacaaaataaaaaaatacaagatcTTTCTACCAACACCGATCTGAGAGAAGAGGAGATATGCCTACTTCGCGAACtttttgaaagaaaaatatCAGGTGATATTCTTACAAAATTTCAGGACGCAACATCAACAGAAACTGTTCACATTGAATTTAAACAGCTCTATCTTTTCTGGAAATCTCTTCAAAATCAATCCGATTTCACAGCGACAATAAATAACACTCTAATCCTACAACAAGGGCAACAATTAATATTACCTGTAATGGAAGAAATTGTTCAAACGCCCCAATTAATCAACTTGGACGATGACCAACTAATCCAAATTCAAGTAGATGACGCCGTACCAATCTCTCAAACATGTGTCTTAAATGATAGCCAGCCAATTCATATAGAAATTGAATTCGTCAACCAAATGCTTCAAACCCACCACACACTGGATAAAATTCAACAAACCCAAACCGTAATAGATGAACTCGGCCAAATGTCACCAATTCAATCGCTTAGAGCAGCTGAACACCTTCAAACTATTACAGACGGAAAAGAAATGAGTGAAACCTGCTTTCTGCTTCAAGAACGGCCAACCAAACTTTTAGCAGAAGACTTGAATCATATAAACGGaggaagtaataaaaaaaaagcagAATGTCATACAATTTCCCACATCCCAGGTGAAATCTCTAAGCCATGCACCACTCAACAGCCATTAACTCAATCCACAGCAGAAGACACATATGAAGAATCCAATTTCTATACTCTCCTACCTGTACCCCAAACTGAAGTTATGAATGAAAATGTAAGAGAATTGCCCGACATACACACCCCCAAAAGCCGACAAACTAACCGGTCAAATAATGTGAAAGAAAACATTCCTAATCCAGATCATAAAGGTAGCGGGCAAATTTCTGTCATAGTCGATATTCATGAGCATCGAAAATTATCAGAACCCCGCGTAATACGAGATTGCATTGATAAAATAACATGTCATGACACCATTTTCGAAGAACTTCCAAACTTGAGCAATCTTGAGGACCTTAATCAAGGATCCTTATTTTCTGACACATCAATAAACTGGGATAGAGTTTCTGAATTTGAGGCTGTCAGTCCAGTATGTTCAGAGCCCATAGATCTTTTAGAACCACAAAGATTAAGAACAACAGAAAATATTGACTTAACCAGAGACAACTACATTACACCTAAAAAAGGCTTCCCTACTCCTTTCAAAGATGTGTTAtactttcctaaaaaaataacgACCGATTCGACGAAGGTTAAAAAGGTTATGAAAAAAATTCTTCCTGTCGTTGCTACTTCCGACGAATTTGTGGAATACCAAAGACGTGAAAAAAtggaaaaggaaaaaaaactacttttaaaAACACAGAAGGCTGAagagaagaaaagaaaatcttTAGATAACACCAATATGAGcataaataaagttaaaaaaacgaaaactttTAAATCAGGGAATCAAAATAAAGGAAACCCTGCCaatgacaaaaaatataaaaagatcaATGTCGGTGATTGGGTTATCGTTACTCATGAAGAGGAGTACTTTCCTGGTCTTGTAATTACAGTGAATCCCCAAAGTTTGGTTGTGAAAACCATGCATATGTACAAAGATAATTGGAAATGGCCCCAAGTGGATGATGTGTTGCCGTATTCGCTAGACAAGCTAGTTACGTCAATAAATCCACCATCATTTACTCGCCAGCGTGAAGTCTTCAGTGTTCCCGAAATAAAAACTTTgcggaaaaataacaaataa
Protein Sequence: MVPRPRKKYTQDDLKLALHQIRNGDSVYKTGKKFGIPESTLRDKIRNRYKLKCGRPTLFSEEQEKLLVNWATTLGDRGFPVTKEQFLFNVGNLLKRLHPTRKKCVPGKRWYNNFMSRNKSLSRRVCQSLTRPRSKITINTLREWFEKVKTYFEQNNITDILSDPTRIYNCDETAFFLSPKGNDVLVRKGSKKVYSRSANDDKECLTVLVTVAASGDVAPPMVLFPYKKRLPPGLPDSTPKGWGVGHSENGWMTQETFFEYLANVFHPWLLKKDIHFPTVLFLDGHTSHISLELNEFCRDNQIILVALVPNATHLMQPLDVAAFRPVKGIWKSVVHQFKVENNFEKVRRVDFCSLVKTCLDQALKKQTIQNGFKSCGLYPFDVTRIDMSMLISETSEYNHNTIIQNKEQNKKIQDLSTNTDLREEEICLLRELFERKISGDILTKFQDATSTETVHIEFKQLYLFWKSLQNQSDFTATINNTLILQQGQQLILPVMEEIVQTPQLINLDDDQLIQIQVDDAVPISQTCVLNDSQPIHIEIEFVNQMLQTHHTLDKIQQTQTVIDELGQMSPIQSLRAAEHLQTITDGKEMSETCFLLQERPTKLLAEDLNHINGGSNKKKAECHTISHIPGEISKPCTTQQPLTQSTAEDTYEESNFYTLLPVPQTEVMNENVRELPDIHTPKSRQTNRSNNVKENIPNPDHKGSGQISVIVDIHEHRKLSEPRVIRDCIDKITCHDTIFEELPNLSNLEDLNQGSLFSDTSINWDRVSEFEAVSPVCSEPIDLLEPQRLRTTENIDLTRDNYITPKKGFPTPFKDVLYFPKKITTDSTKVKKVMKKILPVVATSDEFVEYQRREKMEKEKKLLLKTQKAEEKKRKSLDNTNMSINKVKKTKTFKSGNQNKGNPANDKKYKKINVGDWVIVTHEEEYFPGLVITVNPQSLVVKTMHMYKDNWKWPQVDDVLPYSLDKLVTSINPPSFTRQREVFSVPEIKTLRKNNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01007233;
90% Identity: iTF_01007233;
80% Identity: iTF_01007254;