Maru026704.1
Basic Information
- Insect
- Micropterix aruncella
- Gene Symbol
- -
- Assembly
- GCA_944547385.1
- Location
- CALYMV010005356.1:34736-35728[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-10 1.6e-08 35.3 0.0 3 40 17 54 15 57 0.94
Sequence Information
- Coding Sequence
- aTGGTGCGTACATATACCCGAAAAACCAACCGTCAGTCCTGGTCTACGGACGCCATGAAACAAGCTGTTGATGCGGTCGTTAGTGGAGAAATGGGATACCTGGCGGCATCTAATCTGTTTGAAGTGCCATCATCAACACTAGAGAGATATGTTCGTAAAAGACGACAAAATCCAGAAGCTGCTATTGATAAAACGTCAGGAAAATACCACACCGTTTTCACAGCTGAGCAAGAATTAGAGCTTGTAAACTACCTGAAAGATATGCAAAAACAACTCTTCGGAATGACTAAGAAAGAATTTTGTCGACTAGCATATCAGCTAGcaggaaaaaataattacagcCACAATTTCAACAAAACTTCGGAAATGACGGGAGAAGACTGGGTTAACGGGTTTTTGAAGCGTCACCCAGATTTAAGCCTAAGAAAACCTGAAGCAACATCTGGAGCAAGGGCAATGGGTTTCAATAAAGTAGCAGTATTGAATTTTTTTACTCTGCTTAATGAAGTTCTGGACAAACACAAAATAGATGCTACAAGAATCTATAATTGTGATGAAACTGGCATTAGCGTGGTTCCTAAgcagttttcaaaaataattgctAATAAAGGACAGCGTCAAGTAGGCGTTTTAATATCTGCCGAAAGAGGCACTACTGTGACAGCCGAGATATGTTGCTCAGCTGCTGGAACATACATGCCCCCATTGCTGATATTTCCGCGAAAGGAAAAACAACGCCAATTTGAAATTGGTCTCCCGCCAGGAGGCTGGGCTGAAGTTAGCGACTCTGGTTGGATGACTGcggatatatttttaatatggtttaaACAGTTCATTCTGTTTTCGAAAGCTCAGAAGGATCAACCTGTTCTTTTACTCCTTGATGGGCATGCGTCTCATACAAAAAACTTGCCCTTTATAGATATGGCACGAGAAAACGGCGTAATAATATTGTGTTTCCCTCCCCACTGCTCTCACAAACTACAACACTAG
- Protein Sequence
- MVRTYTRKTNRQSWSTDAMKQAVDAVVSGEMGYLAASNLFEVPSSTLERYVRKRRQNPEAAIDKTSGKYHTVFTAEQELELVNYLKDMQKQLFGMTKKEFCRLAYQLAGKNNYSHNFNKTSEMTGEDWVNGFLKRHPDLSLRKPEATSGARAMGFNKVAVLNFFTLLNEVLDKHKIDATRIYNCDETGISVVPKQFSKIIANKGQRQVGVLISAERGTTVTAEICCSAAGTYMPPLLIFPRKEKQRQFEIGLPPGGWAEVSDSGWMTADIFLIWFKQFILFSKAQKDQPVLLLLDGHASHTKNLPFIDMARENGVIILCFPPHCSHKLQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00152307;
- 90% Identity
- iTF_01006966; iTF_01006967; iTF_01006973;
- 80% Identity
- -