Basic Information

Gene Symbol
kn
Assembly
GCA_944547385.1
Location
CALYMV010005679.1:75551-91714[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-119 3.7e-115 386.6 0.0 207 387 31 220 20 223 0.97
2 2 3.9e-08 0.00053 19.6 5.9 425 509 237 324 226 364 0.69

Sequence Information

Coding Sequence
ATGTCAAGTACTTTCTGCGAGCGCCGAAGAAATGAAAGCCTCCTCTATGGAGAAGACTCGAACAATGGAATAAGGAATATTTGCTCTTATAAAATAGAGgTGGTGATATCGACGCAGGTGGTCGTGGACGGTCCCTTATTGGCCATCTCTGACAACATGTTTGTCCACAACAATAGCAAGCACGGCAGACGAGCGAAGCGGCTTGATCCGGGCGAAGCCGGTCTCTACCCGCCCCTACCAGTGGCTACTCCATGTATAAAGGCGATATCTCCAAGTGAAGGATGGACATCAGGAGGTTCAACTGTCATCATTGTAGGCGACAACTTCTTCGATGGTCTCCAAGTAGTTTTCGGTACAATGCTCGTCTGGAGTGAGCTTATTACATCACACGCCATCAGGGTCCAAACCCCACCGAGACATATTCCTGGAGTGGTAGAAGTAACATTATCGTACAAAAGTAAGCAATTCTGCAAAGGCGCGCCTGGAAGATTTGTATATGTTTCAGCACTCAACGAACCGACCATCGACTACGGGTTCCAGAGGTTACAAAAACTGATACCGAGACATCCTGGAGACCCTGAAAAATTACCAAAGGAAATAATTTTGAAACGAGCGGCAGACTTAGCGGAAGCATTATACTCCATGCCGCGGAATAACCAGCTGGGTCTAGGAGGTCCCAGGTCACCTCCCGGAGGAAATATGCCCGGGGGATTCAATTCCTATACTGGGCAACTAGCGGTCAGTGTACAGGACACGGGGGCGGGGCAGTGGACAGAAGAGGAGTATGCGCGCGGGCAGGCGTCGAGCGCGTCGCCGAGGGGCGTCGCGGCGCCGACGAACGGCGCGGGCTACTGCTCGGGCGCCGCAACGCCGCACTCGGCCGCGTACGGCGCTTACGGCGTCTCGACCGTCGCCGCCGCAGCGCCGCCTCTCTTTAATTCGGCACATAACCGCTACCCGACATACGATTACAACGCGGGATATTCCTACATTCAAGCATCCAATGCCGCAAATCGTGATGACAGTTGCAGAAAGAGCGACCAATCCACCAAAGAAATAGCCACACAAATGAAAGATAAAAACTATGGAAAGGAGTTCATTGATATCAAGGATTGTCAACTATCCGAATACCCCATCAAAAACGGCGATAAGGAAAGGAGTGCATTTGCACCGGTCAAGAGTGTTACTCCTCTCACTTACATACATCCATCGAAATCGTACCAAAACCTTATGCAGCAACATCATGCGATGTCGGCTGGCTGGCACCACCTAGCAGTACAATGTTAG
Protein Sequence
MSSTFCERRRNESLLYGEDSNNGIRNICSYKIEVVISTQVVVDGPLLAISDNMFVHNNSKHGRRAKRLDPGEAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPPGGNMPGGFNSYTGQLAVSVQDTGAGQWTEEEYARGQASSASPRGVAAPTNGAGYCSGAATPHSAAYGAYGVSTVAAAAPPLFNSAHNRYPTYDYNAGYSYIQASNAANRDDSCRKSDQSTKEIATQMKDKNYGKEFIDIKDCQLSEYPIKNGDKERSAFAPVKSVTPLTYIHPSKSYQNLMQQHHAMSAGWHHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-