Basic Information

Gene Symbol
slbo
Assembly
GCA_944547385.1
Location
CALYMV010002352.1:21050-21934[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.8 1.9e+04 -3.1 0.9 38 56 20 38 13 47 0.53
2 2 2.6e-11 5.7e-08 33.8 9.1 3 62 206 265 205 268 0.93

Sequence Information

Coding Sequence
ATGGAGTCCCCGCAGATGTACGACACGGCGAGCCAGCAGCACGCGGCGGCGACGCCGCAGCAGGAGATGAAAAAGACGGCGCAGGAGGAGCAGCACGCGGCGCAGCACGCCGCGCAGCACGCGCAGCACGCGCAGCAGCACGCGCCCGCGCGCGTCGCGCGACACCTGTACCCGCCGCCGGATCTGGACGATCTGAACGGGCAGGAGATCAGCCTGGACCTGCAGCACCTGATCGAGGATCAGTTCCGCGATCAGGAAGGGTTGACCTTATTCCAGGACATACTGCCGGCGCGGCAGACGTATCAAAGAACGACTTTAGCGTATATGCCGCAGCCTGTTCATTCGGCCGCAGCTTACGGTTCGAACGGGCCGCAGTCCAATTCGTCGAACCCTATTAAGGAAGAACCGCCGGAACCGCACGATTTTAGGAGGGCGTGCGCACAGCCCTTCCCGGCGCCCTACGGCGGGACGTACACCGCCACGGGCGCCGCGGCGACGGCAGGCCCTTACGCGCCCTCCGCCGCCCTTCTAGCCCCGGCCGCAGCCCTTCTCAAACACAAACCGGCGGCCGCAGGCCCGAGAAGACACTCCGGAAAACACGTGGACAAAGGCACCGACGagtaccgccgccgccgcgagCGCAACAACATCGCCGTGCGCAAATCCCGAGAAAAAGCCAAAGTCCGCTCCAGAGAAGTCGAGGAAAAGGTCAAGTGTCTGATGCGCGAGAAGGATAACCTACTCAAGCGACTGGAAGCGGTAAGCGGAGAGCTGTCCCTGCACAAGCAGATGTACGTTCACCTCATGAACCTAAACCACCCGGAAATAACAGAACTGTGCCGGTCGATGCTCAACCTCGGAGCGCCGCCGGACCACGGCCTGTGA
Protein Sequence
MESPQMYDTASQQHAAATPQQEMKKTAQEEQHAAQHAAQHAQHAQQHAPARVARHLYPPPDLDDLNGQEISLDLQHLIEDQFRDQEGLTLFQDILPARQTYQRTTLAYMPQPVHSAAAYGSNGPQSNSSNPIKEEPPEPHDFRRACAQPFPAPYGGTYTATGAAATAGPYAPSAALLAPAAALLKHKPAAAGPRRHSGKHVDKGTDEYRRRRERNNIAVRKSREKAKVRSREVEEKVKCLMREKDNLLKRLEAVSGELSLHKQMYVHLMNLNHPEITELCRSMLNLGAPPDHGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01008315;
90% Identity
iTF_01008315;
80% Identity
-