Basic Information

Gene Symbol
gt
Assembly
GCA_944547385.1
Location
CALYMV010010390.1:79214-80128[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.1 1.5e+04 -2.8 0.1 46 57 122 133 121 136 0.57
2 2 3.2e-14 6.9e-11 43.1 2.5 6 60 247 301 242 304 0.93

Sequence Information

Coding Sequence
ATGGAAATGGTGTTGGATTGCTCGTCTCGCCACGGCGATGTTGTGCTAGATTTATCATGCTCAAAGCGGCAGCTTACCGTAGAAAAATACTACTCAGCATTCGATGATATGAAGCACGGTTCCAAGCGCAGTTATACAGCGTACACCCAGAACTATTCTCCTGATTCTACCAGCAATTACCAGCAGTATGAAGAAAGAGTGTGCACGCCTGATAGGGTGCCGGAAGTGTTCTCTTCGGCGAATATATCACCGACGAAGAGCCCGTCTTTGTATAGGACAGAGGCTTGTTCCCCGAGCTATGTCGCCTGCTACCCGAGCGTCGATCATTTGAACTCTCAAATGATCCAAGCTGCTTATCATCAGAAGAAAATCAGGAGTCTAAAGCAGGAAAGAGACGATACTTCAGAGACTGGCTCCGAAGGATCCAGTTCGTCGCCGATGTACACTGCTGTTGCAGCGGCCACGAAAGATGGAAAAATCGCCAGACCCTTCAAGGCGTATCCGAAAGACCCCTTCAGCATGGCGGCCGGATTCACAACGGCAGACGCGATCCTCAACACTCAGTCGGCAGAAAAATATTCAGCGTTCCGAGAGAGCATGCTGAAGCAGATCTTCGAAGCGAACGGCGGACAGGCGACCGTCTCTAACCCGAAGATGAGGAGAACCGTCAACACGGGCGGTTACTCCAGCGAGGACGGGAAACCGCGCTCGGAGGACCCTTCCAAAGACGGCGCCTACTTCGAGAGGCGAAAGAAGAATAACGCGGCTGCAAAGAAATCCCGCGACCGCCGAAGAATCAAAGAAGATGAGATCGCCATCAGGGCGGCGTTCCTGGAACGGGAGAACATCGAGCTCAAATTTGAGCTAGCAGCAGCTCGGAAACAGCTCGCTCTTTACGGCGTTTCCGCAACTTAA
Protein Sequence
MEMVLDCSSRHGDVVLDLSCSKRQLTVEKYYSAFDDMKHGSKRSYTAYTQNYSPDSTSNYQQYEERVCTPDRVPEVFSSANISPTKSPSLYRTEACSPSYVACYPSVDHLNSQMIQAAYHQKKIRSLKQERDDTSETGSEGSSSSPMYTAVAAATKDGKIARPFKAYPKDPFSMAAGFTTADAILNTQSAEKYSAFRESMLKQIFEANGGQATVSNPKMRRTVNTGGYSSEDGKPRSEDPSKDGAYFERRKKNNAAAKKSRDRRRIKEDEIAIRAAFLERENIELKFELAAARKQLALYGVSAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01008311;
90% Identity
iTF_01008311;
80% Identity
-