Mmed017311.1
Basic Information
- Insect
- Microplitis mediator
- Gene Symbol
- -
- Assembly
- GCA_029852145.1
- Location
- CM056850.1:22113003-22127205[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 3.7 5.3e+02 2.3 2.3 1 23 11 34 11 34 0.89 2 31 0.016 2.3 9.8 0.1 1 20 77 98 77 100 0.91 3 31 0.01 1.5 10.4 0.2 3 21 120 140 118 141 0.92 4 31 1.2 1.8e+02 3.9 4.6 1 23 149 172 149 172 0.95 5 31 0.0036 0.52 11.8 2.0 1 21 192 214 192 215 0.96 6 31 1.3 1.8e+02 3.8 3.6 1 21 223 243 223 246 0.95 7 31 0.084 12 7.5 1.0 1 21 290 312 290 313 0.96 8 31 0.35 50 5.6 2.2 1 23 321 344 321 344 0.97 9 31 0.0057 0.82 11.2 2.6 1 21 486 508 486 509 0.96 10 31 1.3 1.8e+02 3.8 3.6 1 21 517 537 517 540 0.95 11 31 0.029 4.1 9.0 1.6 1 21 583 605 583 606 0.96 12 31 0.22 31 6.2 1.1 1 23 614 637 614 637 0.95 13 31 1.6 2.2e+02 3.5 0.6 1 21 703 725 703 726 0.92 14 31 0.08 11 7.6 1.5 1 21 825 847 825 848 0.97 15 31 9.2 1.3e+03 1.1 1.7 1 23 856 879 856 879 0.73 16 31 3.1e-05 0.0044 18.3 0.4 1 22 945 968 945 968 0.96 17 31 0.012 1.7 10.2 0.9 1 23 976 998 976 998 0.98 18 31 0.0014 0.21 13.1 0.6 1 21 1059 1081 1059 1082 0.96 19 31 0.0069 0.99 10.9 0.1 3 20 1134 1153 1132 1155 0.92 20 31 8.3 1.2e+03 1.2 5.5 1 23 1163 1186 1163 1186 0.89 21 31 0.0025 0.36 12.3 0.3 3 21 1225 1245 1224 1246 0.91 22 31 0.0045 0.64 11.5 0.0 1 21 1298 1320 1298 1321 0.94 23 31 1.5 2.2e+02 3.6 1.7 1 21 1329 1349 1329 1350 0.86 24 31 0.021 3 9.4 2.3 1 23 1367 1391 1367 1391 0.97 25 31 0.9 1.3e+02 4.3 5.0 1 23 1398 1421 1398 1421 0.96 26 31 0.00062 0.089 14.2 1.3 1 21 1443 1465 1443 1466 0.95 27 31 1.6 2.3e+02 3.5 0.1 1 19 1474 1492 1474 1495 0.70 28 31 0.0081 1.2 10.7 0.3 1 21 1543 1565 1543 1566 0.95 29 31 0.001 0.14 13.6 0.5 1 21 1586 1608 1586 1609 0.94 30 31 3.5 4.9e+02 2.4 4.3 1 23 1617 1640 1617 1640 0.95 31 31 0.0052 0.75 11.3 0.7 1 21 1670 1692 1670 1693 0.90
Sequence Information
- Coding Sequence
- ATGAAATACGAGTGCGGAAAATCACCGAGATTTCGATGCTCGCGCTGTGATTATCAGTCGCCATTTAAGCAACACGTGCTAAGACACGCAAGCGCAAAGCATCCTAACCAATTAACCGAAGCGATTAATCAGCAGCACAGTAATCCTCTGATTAACAGTAGTCAGGATCTTCAGCCCGAGCAGATCTTAAGTCATCAAATACTAAAACACGAAGTGCCTACGGGACAATTTATATGCGGCAACACAGATTGCGGCGCTTCCTTCACAAATTTATATGCTTTGAATTATCACACCAGTTATATAATTCAATATGGCCGCCGCGCAGCAGGGAGAGATCTCCAGGACGAAGTTTACGGTTGCCCGAATGAAAATTGCAACCGTGTATTTAAATGGCGTAGCAATTTAACGAAACACATAAACTTTGAGTGCGGAAAACCGCCGCGGTTCATGTGCTCCAAGTGTTACTACCGTTCGCCACGGAAACACGACGTTATGAAACACACGACGAAACAGCATCCCAATGAAACAGTGACGCTTGTCGAATTGTACAAACCAGACAAAGCTAGAGGGGAATTTAAGTGCCCGAATATTAACTGCGGCAGTACTTTCAAAAAACAGTACAGTCTTACTTATCATCTTAAACATTTCTGTGACAAACCCCCCCGGTTCAAGTGCCCCTACTGTTTTCACGTCGGGAAATTATCGACGAACATAAAACAACATATTCGCTGCATTCATCCGGGAAAAAaatttcaaACCGCGGTTTTTAAACCAATGAGTCTAGGAACGGGTGTTACTTTTGCTACGGTAATAAAAACTGAGAGAGATGACGTAGACTATATCGCGCCTGAAAATGTACAGGTTAAGTACAAGTGCCCTAATGCTAATTGCACAAGTTCTTTTAAGTGGGAAAAACACTTGACGCGACATATAAAATCTGAATGTGGAAAACCGCCGAGATTCAAATGCTCAAAATGCGAATACCGCTCACTACGGAAACAGGCCGTTATAAGACACACGAGGACACAGCATCCCAATGAAACAGCGACGTTTGTCGAATTGTACAAATCAGACAAAGTTAGAAGAGGGGAATTTAAGTGCCCGAATATTAACTGCTGCAaatttcaaTACCCCGTTTTTGAATCAACGAGTCTAGAAACGGGTCCTACTATTGCTACGATATTAAAAACTGAGAGTGGTGACGTAAACTACATCGCGCCGGAAAATGTACAGGTTTACAAGTGCCCCAATGCTAATTACGCAAGTGCTTTTCAGTGGAGGAAACACTTGACGCGGCATATGAAACTTGAATGTGGAAAACCGCCAAGTTTCATGTGCTCCAGAAGTTACTACCGTCCGCGGAAACGTGAGGTTATGAAACACACGGCGAAAAGGCTTCCCAATGAAACAGTGACGTCTGTCGAATCGTACAAATCAGACAGAACTAGAGGGGAATTTAAGTGTCCGAATCAGAACTGCGGTAGTACTTTCAAAAAACAGTACAGTCTCACTTATCATCTTAAACATTTCTGTGACAAACCCCCCCGGTTCAAGTGCCCCTACTGTTTTCACGTCGGGAAATTATCGACGAACATAAAACAACATATTCGCTGCATTCATCCGGGAAAAAaatttcaaACCCCGGTTTTTGAACCAACGAGTCTAGGAACGGGTGTTACTTTTAGTACGTCAATAATAACTGAGAGCGATGACGTAGGCTATATCGCGCCGGAAAATGTACAGGTTTATAAGTGCCCTAATGCTAATTGCACAAGTTCTTTTAAGTGGAAGAAACACTTGACGCGACATATAAAATCTAAATGTGGAAAACCGCCGAGGTTCATGTGCTCCAAGTGCGAATACCGCTCGCCACAGAAACAGGCCGTTATAAGACACACGACGAAACAGCATCCCAATGAAAAAGCGACACTTGTCGAATTGTACAAAGCTAGAAGAGGGGAATTTAAGTGCCCGATTATTAACTGCAACAaataTCAATACCCCGTTTTTGAATCAACGAGTCTAGAAATGGGTCCTACTATTGCTACGATATTAAAAACTGAGAGTGGTGACGTAAACTACATCGCGCCGGAAAATTTACAGGTTTACAAGTGCCCCAATGCTAATTGCGCAAGTGCTTTTCAGTGGAGGAAACACTTGACGCGGCATATGAAATTTGAATGTGGAAAACCGCCGAGTTTCATGTGCTCCAGAAGTTACTACCGTCCGCGGAAACGTGAGGTTATGAAACACACGACGAAAAGGCATCCCAATGAAACAGTGACGTCTGTCGAATCGTACAAATCAGACAGAACTAGAGGGGAATTTAAGTGCCCGAATCAGAACTGCGGCAaatttcaaACCCCGGTCTTTGAATTAACGAGTCTAGGAACGGGTGTTTCTATTGCTACGGTAATTAAAACTGAGAGCGATGACGTAGACTATATCCCGCCGGAAAATGTACAGGTTAAGTACAAGTGCCCCAATGCTAATTGCACAAGTGCTTTTAAGTGGAGGAAACACTTGACGCGGCATATGAAATTTGAATGTGGAAAACCGCCGAGATTCAAATGCTCGCACTGTAATTATGACTCGTGGGAGAAGGCTAAGATAACCCGGCACGCGAAGTCCCAGCATCCGAGCCAGAAGATTGAGGTCATTGAACTCAACAACTTGGACGGGAAATCATCGAACAGGTTCTCGTGTCCTAATCCTAATTGCAAGAGCACTTTCGCGCAGAAAAGACTGAAAACACCCGTGGTGAGGCTGATAAGACTTGGGCTAATCGGACCACCGGAAGACGAAGACAATGAGTACCAACCGGCCTGCAAATACGAGTGCCCGAATGTTAATTGCAGTAACGTTTTTAAGAACAAGAGCAGTTTGACAAAACACATGCGCAGTGCGTGCGGCAAAGCCGTTAATTACGAGTGCCCTTACTGCGATTATTTGTCGCCGATAAAACGTCTGTTCACTCGGCACTTGAAACGTCACGACCGGCAGCAACGACCGGGACCGCTTTCTTCGAAGAAGACTGAAGCCCCGAAAAAGCCACCGAAAACAGTCAAATCTCGCGTTTACGCATGCCCTAATAATATACTGCCgtatttatttacagttgagTATGACTATAATCCAGTTGTGCGCAAACGCCCGAAAAGCGAAGCTCCGAAATTCAAATGCACGAAAGACGGATGTCCGAGGGCCTTCAGGAGCAAAAAAACGCTGATTTATCACATAAACTTCGAGTGCGGGAAACCCCCGAGGTTCAAATGTTCGCTCTGTAGCTTCGACTCCTGGGAGCGCTCGAGAATACAAAGACACGCTGAAAAATATCACCTAGGCGAGAAAGTTTCTATAGCTCAGTTGTGGAATCACTCGACTCAGGGCATCTTCGGGTGCCCGAGTACGAACTGCGACCGCGTTTACTACAGCCAGGGTGAACTTAATCGTCACATTATTCACGAGTGCGCCAAACGACAGAATTACAAGTGTCCGCACTGCCcctttttttctcattcatcTAAAAAAACCAGGAAACATGTCAGTGACAGTCATCCTGagtATAAAAATCCAATGCTTGTATTCCCAATGAATGCAAACAGAAGCCGAGGACCGATTATCGAAAACGACCCGTCTTGTCCgattgaaataattgaaataaataacgtATGCCCTAATAAAAATTGCGGTAAAGTATTTCAGACAAGAGAAAGTTTTACCAAACATGTGAATAATGACTGCGGGAAACTGCCGAGATTCAAATGTTCCAGCTGCGACTTTTACGCCTGGGAATCTGGGGTCGTTGTGAGACACGCGAACACCCAGCACTTGGACCAGGAAACTCTGGTGGTTGACCAGTGGAACCAGTACGCAAATACCGTGAAACGTTACGCGTGTCCTAATGACAATTGTCCGAGTGTTTATAATTCACAGAGTGAATTAAATCgtcatattaataattactgtgGAAAACCGCCAAAATTCAAATGCCCGTACTGTCCCTATCAGTCCAAGTGGAGCAAAAATACTCGGAGGCATGTCCATACTCtaattcCATATAAATTCCGACGAGGGGCAGCAGGAAAACCTGTGACGTATCACTGCCCGAACGCGTACTGCGCAAGCGTTTTCAGAGAGCGGCGACATCTGATGACGCACATGAGTGTCCACTGCCGACAACTGCCTAAATATAATTGTACGGACTGCAATTACCAGTCTCACACTAAATTTAGTATGGAAAAACACACGAATAATTATCACCCGGAAGTAGAGAGACCACGTGTCGGTGATGAAGTTCAAACTGCGGTACAAACTCCCACTGTGTACAATTGCCCGAACAAAAATTGTTTCAAATCGTACACTAGCAGTTACGAGTTGAATCGtcacataaaatttgtctgCGGAAAACCGCCAAGATTCAAATGCCCGTACTGCGACTACTTGTCAAAATGGGCCGCCGACGTCAAAAAACACGCGAgaCTTGCAGTTTCAAATTTATCTTGGTACGGCTTCGCGGATTCGTACCAATCTAAATATGAACAAGCGGATCCACAAAATAATTCACAGAACCAAGACCCGGTCCCAGGAATGGCGCccaatttatttgaaactcaagttaaaaaatttccatgccCGAACCCTAATTGCAAAAGTGTTTTTAAGAGCCAAAGATATTTGAACGGTCACATGAGATATTTGTGCGGTCAACCGCgcGTGTCGCTGATGGATTTAGCGGAAATGTACCAAGTGCGTTACGTATGCAGGCAACGGAACTGCaacaaaacatttaaaaatgagGCGTCACTTAACACGCATGTAAGAGACATTTGCAATCAACCGCCTCGATTTAAATGCGGGTATTGTCGTTACAGATCCCGTAAAATAACAGACATCAAGAGACACCTCGTCAGATGTCACCCAGGTCTCGAGTCGAATATCGTTAAGCTCCAAGAGTCTGCTGGTAAATCACGCCCGCGAAATCCCCCAGTTGTTGAAAAGTCAGATTTTTCTTGCATGAATGCCAATTGTTCGCGTAAATTCAGAACAaagagtaatttaatttatcatgttAATTACGAATGTGGTAAATTGCCGCGGTTCAAATGTAACTATTGTGAttttaaacattatttcaAAAGCGTTATTAAGAAACACACACTAACCAAACACCCTGATCAAGAATACCGTTTTATTGTTACCGAGTCTTATTATCAATCTCTGATGTCTACTAGCCAGTAA
- Protein Sequence
- MKYECGKSPRFRCSRCDYQSPFKQHVLRHASAKHPNQLTEAINQQHSNPLINSSQDLQPEQILSHQILKHEVPTGQFICGNTDCGASFTNLYALNYHTSYIIQYGRRAAGRDLQDEVYGCPNENCNRVFKWRSNLTKHINFECGKPPRFMCSKCYYRSPRKHDVMKHTTKQHPNETVTLVELYKPDKARGEFKCPNINCGSTFKKQYSLTYHLKHFCDKPPRFKCPYCFHVGKLSTNIKQHIRCIHPGKKFQTAVFKPMSLGTGVTFATVIKTERDDVDYIAPENVQVKYKCPNANCTSSFKWEKHLTRHIKSECGKPPRFKCSKCEYRSLRKQAVIRHTRTQHPNETATFVELYKSDKVRRGEFKCPNINCCKFQYPVFESTSLETGPTIATILKTESGDVNYIAPENVQVYKCPNANYASAFQWRKHLTRHMKLECGKPPSFMCSRSYYRPRKREVMKHTAKRLPNETVTSVESYKSDRTRGEFKCPNQNCGSTFKKQYSLTYHLKHFCDKPPRFKCPYCFHVGKLSTNIKQHIRCIHPGKKFQTPVFEPTSLGTGVTFSTSIITESDDVGYIAPENVQVYKCPNANCTSSFKWKKHLTRHIKSKCGKPPRFMCSKCEYRSPQKQAVIRHTTKQHPNEKATLVELYKARRGEFKCPIINCNKYQYPVFESTSLEMGPTIATILKTESGDVNYIAPENLQVYKCPNANCASAFQWRKHLTRHMKFECGKPPSFMCSRSYYRPRKREVMKHTTKRHPNETVTSVESYKSDRTRGEFKCPNQNCGKFQTPVFELTSLGTGVSIATVIKTESDDVDYIPPENVQVKYKCPNANCTSAFKWRKHLTRHMKFECGKPPRFKCSHCNYDSWEKAKITRHAKSQHPSQKIEVIELNNLDGKSSNRFSCPNPNCKSTFAQKRLKTPVVRLIRLGLIGPPEDEDNEYQPACKYECPNVNCSNVFKNKSSLTKHMRSACGKAVNYECPYCDYLSPIKRLFTRHLKRHDRQQRPGPLSSKKTEAPKKPPKTVKSRVYACPNNILPYLFTVEYDYNPVVRKRPKSEAPKFKCTKDGCPRAFRSKKTLIYHINFECGKPPRFKCSLCSFDSWERSRIQRHAEKYHLGEKVSIAQLWNHSTQGIFGCPSTNCDRVYYSQGELNRHIIHECAKRQNYKCPHCPFFSHSSKKTRKHVSDSHPEYKNPMLVFPMNANRSRGPIIENDPSCPIEIIEINNVCPNKNCGKVFQTRESFTKHVNNDCGKLPRFKCSSCDFYAWESGVVVRHANTQHLDQETLVVDQWNQYANTVKRYACPNDNCPSVYNSQSELNRHINNYCGKPPKFKCPYCPYQSKWSKNTRRHVHTLIPYKFRRGAAGKPVTYHCPNAYCASVFRERRHLMTHMSVHCRQLPKYNCTDCNYQSHTKFSMEKHTNNYHPEVERPRVGDEVQTAVQTPTVYNCPNKNCFKSYTSSYELNRHIKFVCGKPPRFKCPYCDYLSKWAADVKKHARLAVSNLSWYGFADSYQSKYEQADPQNNSQNQDPVPGMAPNLFETQVKKFPCPNPNCKSVFKSQRYLNGHMRYLCGQPRVSLMDLAEMYQVRYVCRQRNCNKTFKNEASLNTHVRDICNQPPRFKCGYCRYRSRKITDIKRHLVRCHPGLESNIVKLQESAGKSRPRNPPVVEKSDFSCMNANCSRKFRTKSNLIYHVNYECGKLPRFKCNYCDFKHYFKSVIKKHTLTKHPDQEYRFIVTESYYQSLMSTSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -