Basic Information

Insect: Microplitis mediator
Gene Symbol: -
Assembly: GCA_029852145.1
Location: CM056846.1:21233171-21236905[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0036 0.52 11.8 0.8 1 23 147 170 147 170 0.94

2 13 0.02 2.8 9.5 5.1 2 23 292 314 292 314 0.91

3 13 1.6e-05 0.0023 19.2 0.9 2 23 377 399 376 399 0.95

4 13 0.32 45 5.7 6.1 3 23 491 512 490 512 0.95

5 13 0.0085 1.2 10.7 3.3 2 23 561 583 560 583 0.95

6 13 0.014 2 10.0 0.5 2 23 636 658 635 658 0.94

7 13 0.00032 0.045 15.2 0.4 3 23 686 707 684 707 0.92

8 13 0.0087 1.2 10.6 3.6 2 23 759 781 758 781 0.96

9 13 0.085 12 7.5 4.2 2 23 795 817 794 817 0.92

10 13 0.0011 0.16 13.4 0.1 3 23 870 891 869 891 0.93

11 13 0.11 15 7.2 0.9 1 23 974 996 974 996 0.98

12 13 0.00048 0.068 14.6 1.6 2 23 1009 1031 1009 1031 0.96

13 13 0.08 11 7.6 0.3 1 23 1125 1148 1125 1148 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0036	0.52	11.8	0.8	1	23	147	170	147	170	0.94
2	13	0.02	2.8	9.5	5.1	2	23	292	314	292	314	0.91
3	13	1.6e-05	0.0023	19.2	0.9	2	23	377	399	376	399	0.95
4	13	0.32	45	5.7	6.1	3	23	491	512	490	512	0.95
5	13	0.0085	1.2	10.7	3.3	2	23	561	583	560	583	0.95
6	13	0.014	2	10.0	0.5	2	23	636	658	635	658	0.94
7	13	0.00032	0.045	15.2	0.4	3	23	686	707	684	707	0.92
8	13	0.0087	1.2	10.6	3.6	2	23	759	781	758	781	0.96
9	13	0.085	12	7.5	4.2	2	23	795	817	794	817	0.92
10	13	0.0011	0.16	13.4	0.1	3	23	870	891	869	891	0.93
11	13	0.11	15	7.2	0.9	1	23	974	996	974	996	0.98
12	13	0.00048	0.068	14.6	1.6	2	23	1009	1031	1009	1031	0.96
13	13	0.08	11	7.6	0.3	1	23	1125	1148	1125	1148	0.97

Sequence Information

Coding Sequence: ATGACGTCCACCATGACACGTGAGAGAATGCTGATGCCACCATCGAATGAACTAGACAGTGAGGGTTCAAGTGGTGGTGGCGTTGATCATCAACTACCTGATAATCATCATCGAGTGGATCTTCGTAGACATTTGCATACAGACGATATACTCGACTCTAGTAGTCCAAAAAAACGTCGTAAGCAAATGACACCAGTACGAGTGACAACAACATTGATAACAACTGGCGATCAACTGGCATCCgaagaagatgatgatgaCACTTATCACGATGGGTTAGAGGAAGAGGAGATGGAAGACTTAGAGGGAGAAATTACAACAACGGCCCATAACAACCATCATACCGACCGAGAATCAGAGGATGAATTTATTGAGAAAGGTAAGACGACACTAGTACGTGAACAGGCAATAtcaaatgatgaaaatcttaataCTGAATTTCAATGTTCATTTTGCGGTAATTTGTTCGAAGATAAAGATACTTTGTTACGTCATAAAGAAAATGAGCATGAGACGGCTAATTTAACAACCAAATCGATAAATCTAAGCCCGCTGTcgcaaaatttattactaccTGTAGGGGTTAAAATTGAACAACAGGATGAATCATCCGATAATCCCGTAAATTTATCATCgggttttaatttaaaaaattttacaaattcgTGGTTAACAGGAACATCAACGCCAACACAATTGCCGGATTCAGAATGGTCAAATCAAAATCCAATGTTGATGGCAGGTCATATGTCTTATCCCGGTGCCCTAACGCAGTATCTTCCTTTACCAACTTTTCCGATTAATGAAACTGGACAGTTGACACGTAATGCAGTAGTTGGGTCAGGGCCTGTTAGAATTTTCAATCCTGATGCTTATTGTCAGCTTTGTAACAaagaattttgtaataaatacttTCTTAAAACCCACAAAGCTAATAAACATGGTATCTATATGGATCCACCAGCGCCGAATACACCCAATGCTAATGATAACAACGGATTATTGAGTTATCCTAATTCGATTTATCCACCTGCCAATATTAAGTTAGAACATCCACAGTCCCAGCCACCACAGCAACAAAAATTAGAAATCCCAGAAATCAGTCCGGTTTCAATGATTCCCACAATCCCTTGTGATATTTGccaaaaaagatttaaaaatgaggAATCACTAAAAAAACATAAGCAAAAAGTTCATGTCGAACAGATTTCCGATCATACTGACTCACAGTCATTACCGGCTATGGGATTGGGGGAAGACGATTGTAGAGATTTATCATCATCGCGATTGGACAGTAGTCCGAATAATATAGAGGCTTTGTTTAAACAAGAATTTGGCATTGAACAAGAAGATGCTAAATATATGCCACCACCGAGACAATTTTCACCACAATTATGTCAACAGATACGCGAGTGTGGTTTTACGGCGGATAAATTGCGATCAATGGGTATCATTAATCCAGATGCATTTTGTGAAATATGCTTTAAAGAATACtgtaataaacattttttacgtatacataaaattaaaagacacAATATTTTGATAGCAAGTAACGGTAAATCTCCAAATAATCCTGGGGCTGCTGCATCCTGGCATCAAATACAAACAAGCccgttaaatttaattgttagtGATAATCCAACAAGTTCTGACTCTACGGATAAGTCTGATGATTGCGAATGTAAAACATGTGGTATTAGATTTCAAACAAGTGATCTATATGAAAcgcacaaaaacaaaaatcatgaaaatcaAGAAGAAAAATCACCTACAAGACCAACAATGGATATGGAACAAGTAGATAATGAACAACAACGCTCCGATACTATTTCACaagatttacaaaaattacaaacAATGATCTTACAATTGAATGGTTTGAAACCAAATAATAGACCAATTGTTTGTAGTATATGTAGTAGAGAATGTGAAAGTCAATTGGCATTAAAAACCCACATGAGTTTAGAACATGGTACAACTATACAAGAAGAATCACTTTCCCCATCCCAGCTATTGGTTGAAAATTCTTTTAGCACTGGTTCTTCTACATTCTGTACACTGTGTGAGAAAGATTTCCGAACTCCCGATACTTTGAAACAACACCTCGCTGAAGatcataatcatcatcaaACAACACCAACACCAACACCAAATAATTTAACTCATGTTCCATTGATTTCAACGCCAGCTCCGACAAACCAGTTACCACCTGTTCCACCACTTCCACCTCCAGCAGACAAGAAAATAACATCAATGACACCGACTTCAAGTTACTGTGAAATATGTAATAAAGAAttgtgtaataaatattttatgaaaacacATATGCAACGTATGCACGGTATTGAAATTGAAAACGGTTCACAAATAGGTGGTGTTGTGTGTAATATTTGCAATAAAGAGTTGTGtagtaaatactttttacgtGTTCACAAACATAATACGCATGGCATCATTGACGAAGGTACGGTAAGTGGCGGATCAACAACAAACATAAAACCcgataattttgaatcatcAAATTCAGAAGACATGGCAGCTTTAAAATCCAGCGATCAGTTGGGTGATTTAAGTCACAGATATTTCACGCACTTTACAGAAATTTGTCCTGTTTGCAGTAGAAGATTTCGTAGTATTAAATGGCTAAAAGCCCATTTACTAGGCGATCATGGTAAAATAGGTATTGATAAGTGGCGTGATTTAGAACAACAGTATCAACAAAATACAACAGCAGCTAAAAAATTACCAggaaatcaattaattaatcgtcCGATACAACCAAgtccaaatttaaaaataccaaATGGTTTTGATGTAACACATCATTTAAAATCAACAACAAATGATTATGGCACAACAATTGGTAACCAAGTACTTTCAACATTATTTGGTGGTGCTGaggaacaaaataaaaattatcgatgttcttattgtaattttacaacaCCCGTTCtaccatttttatttctacacGAACGATCGCACGTAACATCTGATAACGTTAATTTAGAGCAAAATGCACAGTGTCCCATATGTTCACAAGGGTTTACACAACCGGAAATGCTGCATCATCATTTAGTGACCCGTCATCAATTTACAGGAATGCAATTCCCATCACCAATCATTACTACTCCAACTACAACTGTTGCTGCTACTAATCTATCTTTAGAAGCAAATCAAATTGAACATGAAGtagctgaaaaaaatgaacaatctGACATAACCGATAATAATACACAGTGTCAGATATATCCAGTCCAAGCAAATTCagagacaattaaaaataaaaacgatgATACGAATTCAACTTCTGGAGCAGTTGCCACAACAACTGCAACAGGAACTATTTTGGTAACACCACAAGCTGCATACAAATGTGCACAATGTGGTTTAGCAACTGCCAATTTAAATCGTATTAAAAAACATGTTAAAAAAGATCATAAATCAATAGGTGATCCTACGGACAATGTTATTGCAGAGCTTACCAAAACTCTGCGTGATGTTGCAAACAAACACAAAGTACCTGTTAGCTATGCAATACCCCAagataataattcaaatccaGATACCGCCACAATAATGCAACCATTTATTGTTAAAGAAAAAGATTGTGGTTTCAGTAGTGACGATTGtagggttgaaaaaaaattttcacctgttttaatttatttacctgTACGTACACGAGTTACCGACGCCCTCACAACTTCCTTCACACTTGTTCCTACTTAA
Protein Sequence: MTSTMTRERMLMPPSNELDSEGSSGGGVDHQLPDNHHRVDLRRHLHTDDILDSSSPKKRRKQMTPVRVTTTLITTGDQLASEEDDDDTYHDGLEEEEMEDLEGEITTTAHNNHHTDRESEDEFIEKGKTTLVREQAISNDENLNTEFQCSFCGNLFEDKDTLLRHKENEHETANLTTKSINLSPLSQNLLLPVGVKIEQQDESSDNPVNLSSGFNLKNFTNSWLTGTSTPTQLPDSEWSNQNPMLMAGHMSYPGALTQYLPLPTFPINETGQLTRNAVVGSGPVRIFNPDAYCQLCNKEFCNKYFLKTHKANKHGIYMDPPAPNTPNANDNNGLLSYPNSIYPPANIKLEHPQSQPPQQQKLEIPEISPVSMIPTIPCDICQKRFKNEESLKKHKQKVHVEQISDHTDSQSLPAMGLGEDDCRDLSSSRLDSSPNNIEALFKQEFGIEQEDAKYMPPPRQFSPQLCQQIRECGFTADKLRSMGIINPDAFCEICFKEYCNKHFLRIHKIKRHNILIASNGKSPNNPGAAASWHQIQTSPLNLIVSDNPTSSDSTDKSDDCECKTCGIRFQTSDLYETHKNKNHENQEEKSPTRPTMDMEQVDNEQQRSDTISQDLQKLQTMILQLNGLKPNNRPIVCSICSRECESQLALKTHMSLEHGTTIQEESLSPSQLLVENSFSTGSSTFCTLCEKDFRTPDTLKQHLAEDHNHHQTTPTPTPNNLTHVPLISTPAPTNQLPPVPPLPPPADKKITSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGSQIGGVVCNICNKELCSKYFLRVHKHNTHGIIDEGTVSGGSTTNIKPDNFESSNSEDMAALKSSDQLGDLSHRYFTHFTEICPVCSRRFRSIKWLKAHLLGDHGKIGIDKWRDLEQQYQQNTTAAKKLPGNQLINRPIQPSPNLKIPNGFDVTHHLKSTTNDYGTTIGNQVLSTLFGGAEEQNKNYRCSYCNFTTPVLPFLFLHERSHVTSDNVNLEQNAQCPICSQGFTQPEMLHHHLVTRHQFTGMQFPSPIITTPTTTVAATNLSLEANQIEHEVAEKNEQSDITDNNTQCQIYPVQANSETIKNKNDDTNSTSGAVATTTATGTILVTPQAAYKCAQCGLATANLNRIKKHVKKDHKSIGDPTDNVIAELTKTLRDVANKHKVPVSYAIPQDNNSNPDTATIMQPFIVKEKDCGFSSDDCRVEKKFSPVLIYLPVRTRVTDALTTSFTLVPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01003799; iTF_01005546; iTF_01004602;
90% Identity: iTF_01004602;
80% Identity: -