Basic Information

Insect: Microplitis mediator
Gene Symbol: -
Assembly: GCA_029852145.1
Location: CM056847.1:5719156-5730890[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.42 61 5.3 5.6 1 23 439 461 439 461 0.98

2 19 0.00018 0.026 15.9 0.8 2 19 497 514 496 518 0.90

3 19 0.00017 0.024 16.0 4.1 1 23 524 546 524 546 0.99

4 19 0.0035 0.5 11.9 0.1 3 23 554 575 552 575 0.92

5 19 1 1.5e+02 4.1 1.2 1 23 582 605 582 605 0.97

6 19 4.9e-05 0.007 17.7 0.7 1 23 609 631 609 631 0.97

7 19 0.0022 0.32 12.5 0.5 1 23 637 659 637 659 0.98

8 19 3.8e-05 0.0055 18.0 2.0 1 23 665 687 665 687 0.97

9 19 0.0026 0.37 12.3 0.1 1 17 692 708 692 709 0.90

10 19 5 7.1e+02 1.9 0.5 1 20 1090 1109 1090 1112 0.84

11 19 0.035 5.1 8.7 0.4 1 23 1118 1141 1118 1141 0.98

12 19 9.7e-05 0.014 16.8 0.4 1 23 1147 1169 1147 1169 0.98

13 19 2.2 3.2e+02 3.1 0.2 1 20 1175 1194 1175 1197 0.73

14 19 0.043 6.2 8.4 3.8 2 23 1204 1225 1203 1225 0.97

15 19 0.0038 0.54 11.8 5.1 2 23 1232 1254 1231 1254 0.93

16 19 0.00015 0.021 16.2 3.2 1 23 1258 1280 1258 1280 0.98

17 19 0.003 0.43 12.1 1.0 1 23 1285 1307 1285 1307 0.98

18 19 1e-06 0.00015 23.0 0.5 1 23 1313 1335 1313 1335 0.98

19 19 0.00096 0.14 13.6 2.2 1 21 1340 1360 1340 1361 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.42	61	5.3	5.6	1	23	439	461	439	461	0.98
2	19	0.00018	0.026	15.9	0.8	2	19	497	514	496	518	0.90
3	19	0.00017	0.024	16.0	4.1	1	23	524	546	524	546	0.99
4	19	0.0035	0.5	11.9	0.1	3	23	554	575	552	575	0.92
5	19	1	1.5e+02	4.1	1.2	1	23	582	605	582	605	0.97
6	19	4.9e-05	0.007	17.7	0.7	1	23	609	631	609	631	0.97
7	19	0.0022	0.32	12.5	0.5	1	23	637	659	637	659	0.98
8	19	3.8e-05	0.0055	18.0	2.0	1	23	665	687	665	687	0.97
9	19	0.0026	0.37	12.3	0.1	1	17	692	708	692	709	0.90
10	19	5	7.1e+02	1.9	0.5	1	20	1090	1109	1090	1112	0.84
11	19	0.035	5.1	8.7	0.4	1	23	1118	1141	1118	1141	0.98
12	19	9.7e-05	0.014	16.8	0.4	1	23	1147	1169	1147	1169	0.98
13	19	2.2	3.2e+02	3.1	0.2	1	20	1175	1194	1175	1197	0.73
14	19	0.043	6.2	8.4	3.8	2	23	1204	1225	1203	1225	0.97
15	19	0.0038	0.54	11.8	5.1	2	23	1232	1254	1231	1254	0.93
16	19	0.00015	0.021	16.2	3.2	1	23	1258	1280	1258	1280	0.98
17	19	0.003	0.43	12.1	1.0	1	23	1285	1307	1285	1307	0.98
18	19	1e-06	0.00015	23.0	0.5	1	23	1313	1335	1313	1335	0.98
19	19	0.00096	0.14	13.6	2.2	1	21	1340	1360	1340	1361	0.94

Sequence Information

Coding Sequence: atggaGATGAAGTTACCTGAGCAAGTGCATCAAGTTTGCAGATTATGTGGGCAATTTGAAAgcatatatattgatatttttggcGAAGAAGGTACTAAAAGATTACTtggattgaaaatatttaacaaaataaatattgtgATAGATGAGACGGATCCTCTACCGAAGACGATCTGCGTTCAGTGTCTGGGAAAACTTGAATTTGTTTGTGACTTTCAAGAGGAATGTCTACGTACTCAACAACTGTTACGCGATCAGTATGATGTACCTTCCATACCAGACGTCggagaaaaaatagtaaccGAGGAAACGAATGTCGTGGAAGAGTCAGTAGTGATTGCAGAACCAGCTAGCACGTCTACCAACAACAACAGTACcgataaaaatcataattcaaCAGCTGACATAGAAAACGTCGATCCAACACGTGAAGAAAAGTGCAAAGATGTCACTGAGCCGCTTGAAATTACAACGAAACCTAAAAGAACACGAACTTCACCTAAAACGCGGTCTAAAAGTAATGATAAGGATGCCAATGAACGTGTGGTTGACGAAACACCCAACCGAAGATGGCTGAGAAGTCGCAATACGCCTGAGTCTCGTATGAAAACGCGGAAAAAAACtaagtcgaaaaatttgtCACTCAATAAAGTCACCACGAGAACAAAATCAGCTGTCAAAGAAGGAGTGTCTATTGTAACGCGACTGCGGAGTCAAAATCAAAATCAGAACCGAGCTAGTTTGAATTCCGAGGctattaacaataaaacgaATGACAATACAACAGGATCTAAGACACAAGAAAAGAGCAGTGATGAAAAACGAATGATTCAAATACCAACTTCGGCTTTGAATAAAGTTTTGACAGCCGTATCATCATCACCGGACGTTGAAGTGTCGGTCAAAGAATCAAATAATCGCAATGGTGACATCGAGGACATCAGTTTTACATTAGAACTgagaaaaaaacaagaaacaGAATCATTTGTCACTGTGTTAGCTCGCGTATTTCCTGATCAAGGCTCATGTCTTGTCGGTTCTGAAATAGTCAATCTATTGGAAGATGAAAACAATTCGGAATTGAGTCAGATAATAAACACAATCGTCAAGGGAAAAGTTGGAAAAGACAAAGACTCGGGTGCTACGAGAACTGCTGAGTTAGAGGAACTGGAAAAACGGCTGTCTAGTATCAGCGACAGCGGCGGTGGTGGTCTCGTATCGACCAGAAATCCCGAAGAACTTTTCCGTATTGACGGGGAAGAAATTCGCGTTGACGATAACGTCGAAAGCACAACAGTCGACGGTCAGTCAGGATACTCGTGTAAATTATGCCGTAAATTTTATGAACGTCGGGACAAGTGTACTGTCCATGTAAAAACACATCTTGGTATAAAACAGTACGCCTGTACACTTTGTGTCGCTAAATTTGTATGTAAGTCAGATGTTATGAAACATATAAGATGTTCACATACAAACCCACGGCCGATGCAATGTCCCAAGTGTCCGAAGCGATTTAGATCGAAGTTCGATTTGACTGAACACGATAACGTTCACAAGGGCATCAAACCCTACCAATGTTCCGACTGTGGGCAGAGTTATCATCATAAAGTTTCACTGCAGATGCATGTAAAGTCACATCTTCCTCCGCAAAATTTAGCTTGCGAATATTGCGGTAAAATATTTCCATTTCGCACACGACTGCTCAGTCATATTGGAAGTGTACATTTGAAAAATAGACGTAATTTTCGTTGCCGATTTTGTTATAATCTTTATTCAAGTTTAGCGGTATTGAATGATCACATAAAAACACGACACGCGACAACTTACACGTGTGAAATTTGTtctaaaacatttaaagtTGCATCGAAATATAAAGCGCATGTACTGCAGCATTCGAATCCAAAACCGTTTGTTTGCAATGTTTGTAATAATCGATATGCATCGAAAGCATTTTTGAATGAACATCTGCTTAAACATGAAGGGTTGAGAAAGCATGTGTGCCAAAAGTGTGGAGCCAGTTTTGCTCAAGCCAGTCATCTGGCAGCACATCGTCATGTTCATGGTGAAAAAACTCATGCGTGTCCTGAGTGCGGACGTAAATTTAATAGACGTGATAATATgaaaGTGAAAGAAAATGACGGCTTACCTCAGACTGTTTGTATGCGATGTCTTGGAActcttgaatttttatgtgatttttatGACCAGTGTCATAAAACTCAATGtaatttaaaggaaaaagAATTACCtgaaaataatgaagataATGAAGAATCTGAATCATCTGATGAAAACGAAGAATCAGATAAAGAAAATGAACTCCCTCCAGATTATCCTGATCCTCctgctaatttaaaaaaaaaatctccccTTTCTTCACAATGTCAAAAATCCACGTCTCCACCAAAACCTGAACCAGCTTCTACTATGACCAATTTACCATCAGTATCTACTGCCACGGATCTTCCCACCGCGACAGTTAATCAAGTGCCCGAAAAGTCTTATGATAACGTTCTTGCGGACATCACTAGCTTACATCAGCAACGTCCGAAGTCGAACCTCTGCAAAGAATTATTTCCTCCAGGTCGAGCCTTGAAAAGACCGCGAAAATCTTTGAATTCAAAATCTCACAGCCCAGTGCGCAAATCCAAGCGCATGGAAGAGAAAGAAAGTAATAAAACAAAGCTAAAAAATTCTGACATtgacataaaaaatgattccatCGACAGTacagattttgaaaaaaacatttccaaTAATTCTCTACTCGTTGTCGTAAAACAAGAGAAAAAGTCTGACGAATTGACATGGATTTCTACCTCAGTACTTCCAGAACCCGACAAACCAAAGtcggaaaatgaaaaaaatagtgagcCGCAAGATGACGTTGGATTGGCAACTGGAGATGAAGCTGAAAGTCACATAAATTCTTCAAGTTTATCGATACCAGCATCAATACCCGATGCAAATGCTAACCAACTCTGCAATTTGACAATTGAACGCTTGAGAAATTCGATTATTGATTCCggttttaacaaaaaaactgaagaaaattttgatgaagAAGAAGATGATGAGGATGAAGATGAATACGACGATGATGgcttgagtataaaaaaacgcCGCACGAGTGGGAGTTTTGGTAAATTGTCAGATCTCATAAGTAAAGAACAGAAAGAAGAAATAGAAAAGTATTATAGTATTGACATGACTGTCATTGATGAAAGTGCTGTCAATAGCAAATATTACATtaatgataagaaaaattttgtatgttTGATTTGCAATGCCAGCTATCCGCGGGTTGACAAATGTCGGGTGCATATTTGGAGCCATTTAGATATGAAACCATACCGCTGCAATGCTTGCGATTTTGCTACCGTCACTGTCACGAACATACGCAGTCACATAAGAAAAAGtcatttgaatataaaacCATTTAAATGCGACGTTTGtcacaaaaattttggtaCTGCGATTTTATTGGAggaacatttaaatattcataccGGTGCTAAGCCTTATCAGTGTAAAGTTTGCGACTTTTCGAGTGCCGCTCGTCAAGTTTTGCTTTATCACAGTGCGATTCATAAACCAGctaaggataTTACATGTGATATAtgcaaaaaaactttttactgCAAAGGACGTATGCGAACCCATATGCTTActcacaataaaaacaaatcattgATGTGCAAGTATTGTTCCCATcattttagttcaaaaaaaacaCTCGAACGACACTATGAAAATATTCATTCAAAAGATTATATTTGTGATATATGTGGAAAACATACTAAGTCACGGAAAGCTCTGCATAATCATCAAAatGTTCATTCAGAAGGAAAATTTAAGTGTCCTATTTGTCCAAATGTTTATAAAAGTAGTCATATTCTAAAAGAACATTTGCTTAAACACGAGGGaatcagaaaatataaatgcgATATTTGTAACAAAGATTTTGCTCAGCAATCACATTTGGCAGCACATCGAGCTGTTCATAGCGGAAAAagATTTTTCTGCCCTGGATGTAAAAAAGGATTTAATCGTCACGATAACATGAAACTGCATACAAAAAAATGTGAGATCTTTTTATCAAATCCGAGTAACCAAAATCTTATTGTAAAACGTTTTAATGCAAAACCAATGAGTGCTATAAATGATACAATTAATGATGATGACTTAAGTAGTAACGATTCGTATAAAAAGactgatattaattttaaagttaatgataataataaacaagaaTCAAGTATTTGTATCAAACAAGTGGATCTAGTGGCTGCAGAAAATattccagaaaaaaaaattccaaatgatCAAGTTGCCGTCACTGAAAGTGTTCTTagtttagaatatttttaa
Protein Sequence: MEMKLPEQVHQVCRLCGQFESIYIDIFGEEGTKRLLGLKIFNKINIVIDETDPLPKTICVQCLGKLEFVCDFQEECLRTQQLLRDQYDVPSIPDVGEKIVTEETNVVEESVVIAEPASTSTNNNSTDKNHNSTADIENVDPTREEKCKDVTEPLEITTKPKRTRTSPKTRSKSNDKDANERVVDETPNRRWLRSRNTPESRMKTRKKTKSKNLSLNKVTTRTKSAVKEGVSIVTRLRSQNQNQNRASLNSEAINNKTNDNTTGSKTQEKSSDEKRMIQIPTSALNKVLTAVSSSPDVEVSVKESNNRNGDIEDISFTLELRKKQETESFVTVLARVFPDQGSCLVGSEIVNLLEDENNSELSQIINTIVKGKVGKDKDSGATRTAELEELEKRLSSISDSGGGGLVSTRNPEELFRIDGEEIRVDDNVESTTVDGQSGYSCKLCRKFYERRDKCTVHVKTHLGIKQYACTLCVAKFVCKSDVMKHIRCSHTNPRPMQCPKCPKRFRSKFDLTEHDNVHKGIKPYQCSDCGQSYHHKVSLQMHVKSHLPPQNLACEYCGKIFPFRTRLLSHIGSVHLKNRRNFRCRFCYNLYSSLAVLNDHIKTRHATTYTCEICSKTFKVASKYKAHVLQHSNPKPFVCNVCNNRYASKAFLNEHLLKHEGLRKHVCQKCGASFAQASHLAAHRHVHGEKTHACPECGRKFNRRDNMKVKENDGLPQTVCMRCLGTLEFLCDFYDQCHKTQCNLKEKELPENNEDNEESESSDENEESDKENELPPDYPDPPANLKKKSPLSSQCQKSTSPPKPEPASTMTNLPSVSTATDLPTATVNQVPEKSYDNVLADITSLHQQRPKSNLCKELFPPGRALKRPRKSLNSKSHSPVRKSKRMEEKESNKTKLKNSDIDIKNDSIDSTDFEKNISNNSLLVVVKQEKKSDELTWISTSVLPEPDKPKSENEKNSEPQDDVGLATGDEAESHINSSSLSIPASIPDANANQLCNLTIERLRNSIIDSGFNKKTEENFDEEEDDEDEDEYDDDGLSIKKRRTSGSFGKLSDLISKEQKEEIEKYYSIDMTVIDESAVNSKYYINDKKNFVCLICNASYPRVDKCRVHIWSHLDMKPYRCNACDFATVTVTNIRSHIRKSHLNIKPFKCDVCHKNFGTAILLEEHLNIHTGAKPYQCKVCDFSSAARQVLLYHSAIHKPAKDITCDICKKTFYCKGRMRTHMLTHNKNKSLMCKYCSHHFSSKKTLERHYENIHSKDYICDICGKHTKSRKALHNHQNVHSEGKFKCPICPNVYKSSHILKEHLLKHEGIRKYKCDICNKDFAQQSHLAAHRAVHSGKRFFCPGCKKGFNRHDNMKLHTKKCEIFLSNPSNQNLIVKRFNAKPMSAINDTINDDDLSSNDSYKKTDINFKVNDNNKQESSICIKQVDLVAAENIPEKKIPNDQVAVTESVLSLEYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01004524;
90% Identity: iTF_01004524;
80% Identity: -