Basic Information

Insect: Microplitis mediator
Gene Symbol: -
Assembly: GCA_029852145.1
Location: CM056850.1:19365659-19370422[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.22 31 6.2 1.5 1 23 365 387 365 387 0.97

2 18 0.014 2 9.9 0.7 2 23 423 444 422 444 0.97

3 18 0.0017 0.24 12.9 1.0 2 23 538 559 537 559 0.98

4 18 0.0042 0.61 11.6 0.6 2 23 604 625 603 625 0.97

5 18 4e-05 0.0057 18.0 0.5 1 23 630 652 630 652 0.96

6 18 0.003 0.43 12.1 0.4 1 21 658 678 658 682 0.92

7 18 0.0002 0.029 15.8 1.0 2 23 762 783 761 783 0.95

8 18 0.00023 0.033 15.6 4.8 1 23 839 861 839 861 0.97

9 18 0.00032 0.045 15.2 0.7 1 20 866 885 866 887 0.94

10 18 0.034 4.9 8.8 0.6 2 23 898 919 898 919 0.97

11 18 3.2e-05 0.0046 18.3 0.6 2 23 957 978 956 978 0.97

12 18 2.9e-05 0.0042 18.4 1.6 1 23 983 1005 983 1005 0.95

13 18 0.0019 0.26 12.7 2.9 1 23 1011 1033 1011 1033 0.98

14 18 8.9e-06 0.0013 20.0 0.4 1 23 1050 1072 1050 1072 0.95

15 18 1.6e-06 0.00024 22.3 0.3 1 23 1078 1100 1078 1100 0.99

16 18 0.00038 0.054 14.9 0.2 1 23 1106 1128 1106 1128 0.98

17 18 0.00017 0.024 16.0 4.1 1 23 1134 1156 1134 1156 0.96

18 18 0.012 1.7 10.2 0.4 1 20 1162 1181 1162 1183 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.22	31	6.2	1.5	1	23	365	387	365	387	0.97
2	18	0.014	2	9.9	0.7	2	23	423	444	422	444	0.97
3	18	0.0017	0.24	12.9	1.0	2	23	538	559	537	559	0.98
4	18	0.0042	0.61	11.6	0.6	2	23	604	625	603	625	0.97
5	18	4e-05	0.0057	18.0	0.5	1	23	630	652	630	652	0.96
6	18	0.003	0.43	12.1	0.4	1	21	658	678	658	682	0.92
7	18	0.0002	0.029	15.8	1.0	2	23	762	783	761	783	0.95
8	18	0.00023	0.033	15.6	4.8	1	23	839	861	839	861	0.97
9	18	0.00032	0.045	15.2	0.7	1	20	866	885	866	887	0.94
10	18	0.034	4.9	8.8	0.6	2	23	898	919	898	919	0.97
11	18	3.2e-05	0.0046	18.3	0.6	2	23	957	978	956	978	0.97
12	18	2.9e-05	0.0042	18.4	1.6	1	23	983	1005	983	1005	0.95
13	18	0.0019	0.26	12.7	2.9	1	23	1011	1033	1011	1033	0.98
14	18	8.9e-06	0.0013	20.0	0.4	1	23	1050	1072	1050	1072	0.95
15	18	1.6e-06	0.00024	22.3	0.3	1	23	1078	1100	1078	1100	0.99
16	18	0.00038	0.054	14.9	0.2	1	23	1106	1128	1106	1128	0.98
17	18	0.00017	0.024	16.0	4.1	1	23	1134	1156	1134	1156	0.96
18	18	0.012	1.7	10.2	0.4	1	20	1162	1181	1162	1183	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTTGATATTGAGGATAATAATCAAGTGTCGCACAACGAGGATGACAATGTGGAAGGAAATGTCGAAATTTGCCGGGTTTGTCTCCTCAGCAATCACTTGATGAGAGATTTGTTTGGAGATAATGACGTTGTTTCATTGTCGACTAAAGCCATGAGCTTTGCTAATGTTAAGattcatCCAGATGACGGATTGCCAACTCAAGTCTGTTGCGAGTGCGCTGATAAATTAGAATCTGcgtatgaatttaaattacaagtcGAACAAGCTGACAGTTTGTTGCGAGAAAAATATGACAGCTTGAATATCAaagaagaattattttttaacgaagTTGAAGTGCGTTTGGAGAATGAGCGGCATGATGATGTCACGGATATGGTTGACGAGCACTATGAAGTAACGGGCAGTGTGTCAGATGATAAAACGTCACTACTGAAAGATCACTTGGCATTATTACAAGTTGAAAAACTTACTCATCACCAAGAACAATATCTTGAGGATGAAGTTATGAAAGATCAAATAATGCAATCGGATGAACAATACATTGAAGACGAGCATACAGATGAGCAGATGATTACTGAAGCTATTGAATCATCAGCAAACGATAACATTAAACCTGAGTCAATTATGCATGACCAAGATGGCATTGCTGTCGGAGAACACAATTACATTGTGCAGCACCAGGACTACACGCTGTCTAATGAGCAAGATCATGAATTAATAAACACTGATAACGTTAATGAACACGACGCAAGTGAATACTTATCAATAATTGGAGACGAAGAAAGACTAATTAAAGAAACTGAAAGTCACTTAGAGAATGTCattgatgatgaaaaaaataattgttacatTAATGACAACGATGAGGTCAATaacgatgatgatgacgatgataacaataaattaaatgcaatTGATGAAATTGAAATGAGTAAAAATGAATGTAATGCATCGACATGTCACAATGACATTGACCCGACAGACCAAGTGTCTGATGACGAAAACTATTTTGAAAATCTCAATCTAAGCAGCCGATTATCACAAACTCAATCAGTCAGTAAATCtgataacaaaattttctttatgtGTTACATTTGTGATCAGGAATTTTTGTCAAAAGATATTTTGAAAGAGCACATGCACTCGCATGACGAAGTTAAACAGACGTTGTCTATGAAAAAAACACCAGATAAAGTTGCGCAGAAAAATATGTCTCCTGTTAAATCCCAACCGCCTTCGGGCAAAAAACCTAATAAATGTCCTTACTGTGGTAAGGAATATTTGTATgttatatcatttaaaaaacacATTAAGCAGCATCAGAAAAATGATGATGAGTTGAAAGAAAACATCGATTCGTTGCTTCAGAATGATAATTCTgcggattcaaataattatgacAACACCGATACGTTTGAAGTCATTGCTGATGATAAGCATAATATCGAAGAGTATACTGATAATGGTAATGGTAATAGTAGTATCAGTGTAGACATTGATCAgcaaaatttaagtaaacatGGTGGTAATTGTCCAGATATTTTTTCAGATAATTGCAATGAAGCTTCAGCTCATCACGATTATAAAGATGATAAACAAAAGTGTAACATTTGCGAGCTAGAGTTTGATTCGAtggataaattgaaaaatcatcGCTCGACTCATGTTATTGAAGGCGTAATAACAGAACAAGATTTAAAAGACGAGCTTGCTAGTATTTGTCAAAGAGAATATGATCAAGAGAGACTAATTGatggtaatttaaaattggaaGTTAAAAAGGAATATAATGAACTCAAGTGTCCGACTTGCTTTTTATTGTTTGGTAGTAAAAAATCGCTGGCAAAACATTTAGAGACACATGAAAGTGTAAGGTACCGTTGCAAAATATGCGGTGATGAATTTACACAGAAAGACGATCTTCGCAAACACGCTGAACAACACTCGCAAgctaaaacatttaaatgcaTGCAGTGTAACAAAATATTTGCCAATGAACTGACACTGAGGAATCATTTGATAGCAACAAATCACAAGACAACTGTACACGGTGAAGAATATGATccaaataaaagaattaaaagagTGGCAGCACGTGCAGcgcaaaaaataattgacaaaATTAGCACTGAGGATAGCCTCGATGACTCGGAAAGagacgatgatgatgacgattaTGGTGAATTAATTTTGAAGAGTGAGTCGGGAGTTAGTGGAAAAACTGGAGAAAAATCGGTgtcgaaaaaattgtttggtaaaaataaaaatcttgaaTGTGAAACTTGTGGCAAGAGATGTATTTCTAAGCAAGCGTTGGCTAAACACATGGATTATCATATGAGAAACATGAAGGCTGAGTCTCCAGagtcgaaaaacaaaaaaagtaatgaagTCAAAGATATAACTCGGAGTGTTCCTGGATTTTCTGACATcaatgatgatgacgatgatgatgatgacgacaATGACTTTGATGGAGGGTTAGACTGGCCAATGGACAATCACGAATGTTCGACATGTAAGAAAAGATACAGTACGAAAAAATCATTGTTGCGACATCAGCTTTTACATGAGGAGCCTAATTTTGAGTGCGATATATGTAACGTTAAATTTTATCGCAAAGACAAATTAAAAGCCCACTACGATAAATGCTCGGAAAAGAATCCAGATCAAGTGAGAAAGTGTAATATTTGCGGCGATACCTTTGAgaataatgatattttacGTGAACACAGATCAAAACACGTTGACGAGGGTATTCTTACTGAGGAAGACTTGAAAGATCTGGAGCCTGGTTCTGAGGACAGAAAGGGAGAGAAAATAGCGAGGAAGAGACGCACTGATATTGTCGGGTTGGAATGCACTGAATGTAACAAACAATATACATCACGCAAAGGTCTTTTGAGACATATACAAGTGCATGAaggtaaaaaatatctttgcGATATATGTCCGAAGAAATTTTACCGCCGCGagcatttgaaaattcatgTCGCTAAACATAATATGATAAAACCACACAAGTGTCCGCGTTGTTCAAAACGTTTTATGAAGGAGGAACAGCTTTCCGCGCACTTGACTAAACACGAGAgaacattcaagaaaaataaagaaccCGACAGTACATCCAAGAGATTTCTCTGtgaaatttgttcgaaaagtTTTACTCAATCGACGACACTAGTTGCACATTTGCGCGCTCACAATGGCATTAAACCGTACGTATGTGAAGTTTGTGCAAGACCATTTACGACAaacgcatatttaaaaatgcacatgAGAACTCATACACAAGAACGACCGTACACTTGTCAATTTTGTGCGCGTGCTTTCGCGAGAGCTGACACACTAGCAAATCATTTAACTTCACATACCGGCGAGGCCAAATATCACTGCAAGTAttgtccgaaaaatttccgtCGACTAAAGTCACTCAAAGAGCACGTATTTATTCATACTGGACAGCGACCCTACGCCTGTCCTACATGCGACCGAAGATTTAACAACAACGGAAGTCGCTATGCTCATAGCAAAAGATGCAAGCAGAATATGCTGCAGAATCAGGCCAGACAAAATCAACCACAAACTTCCCAGCCTCAAATTACTCAGCCTCAAATCAGCCAGACGCAAATCAGTCAACCTCAAATCAGTCAGCCTCAAATCAGTCAAACTCAAATAAATCAGCCTCAAATAAACCAACAGACAATAGCAATAGCATCAGCACCACAAACGGCTACCATCAGACTAGCACATTCTGTCGGCCCGACAATGCAAGTTGTTCAATCGAAAAATCTCAAGACAATAACAATCACAAGACCTGAAACCGTCGGTACACATCAAATCTTACAGCACCAAGAATTACTCATGCCACTTATTTTACCTCTTACTGTTACATTAACTGATTGCGATGACGAAGTTATTTTACCAGAGGGTACCAAGATATTTACCACTACGTAG
Protein Sequence: MDAVDIEDNNQVSHNEDDNVEGNVEICRVCLLSNHLMRDLFGDNDVVSLSTKAMSFANVKIHPDDGLPTQVCCECADKLESAYEFKLQVEQADSLLREKYDSLNIKEELFFNEVEVRLENERHDDVTDMVDEHYEVTGSVSDDKTSLLKDHLALLQVEKLTHHQEQYLEDEVMKDQIMQSDEQYIEDEHTDEQMITEAIESSANDNIKPESIMHDQDGIAVGEHNYIVQHQDYTLSNEQDHELINTDNVNEHDASEYLSIIGDEERLIKETESHLENVIDDEKNNCYINDNDEVNNDDDDDDNNKLNAIDEIEMSKNECNASTCHNDIDPTDQVSDDENYFENLNLSSRLSQTQSVSKSDNKIFFMCYICDQEFLSKDILKEHMHSHDEVKQTLSMKKTPDKVAQKNMSPVKSQPPSGKKPNKCPYCGKEYLYVISFKKHIKQHQKNDDELKENIDSLLQNDNSADSNNYDNTDTFEVIADDKHNIEEYTDNGNGNSSISVDIDQQNLSKHGGNCPDIFSDNCNEASAHHDYKDDKQKCNICELEFDSMDKLKNHRSTHVIEGVITEQDLKDELASICQREYDQERLIDGNLKLEVKKEYNELKCPTCFLLFGSKKSLAKHLETHESVRYRCKICGDEFTQKDDLRKHAEQHSQAKTFKCMQCNKIFANELTLRNHLIATNHKTTVHGEEYDPNKRIKRVAARAAQKIIDKISTEDSLDDSERDDDDDDYGELILKSESGVSGKTGEKSVSKKLFGKNKNLECETCGKRCISKQALAKHMDYHMRNMKAESPESKNKKSNEVKDITRSVPGFSDINDDDDDDDDDNDFDGGLDWPMDNHECSTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDTFENNDILREHRSKHVDEGILTEEDLKDLEPGSEDRKGEKIARKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPHKCPRCSKRFMKEEQLSAHLTKHERTFKKNKEPDSTSKRFLCEICSKSFTQSTTLVAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYTCQFCARAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNMLQNQARQNQPQTSQPQITQPQISQTQISQPQISQPQISQTQINQPQINQQTIAIASAPQTATIRLAHSVGPTMQVVQSKNLKTITITRPETVGTHQILQHQELLMPLILPLTVTLTDCDDEVILPEGTKIFTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00382050;
90% Identity: iTF_01004518;
80% Identity: -