Mmed028453.1
Basic Information
- Insect
- Microplitis mediator
- Gene Symbol
- clz9
- Assembly
- GCA_029852145.1
- Location
- CM056854.1:14711211-14713485[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8e-08 9.8e-05 22.9 0.1 15 34 10 30 3 33 0.88 2 3 1.3 1.6e+03 -0.2 0.0 28 39 396 407 396 412 0.77 3 3 5.5 6.7e+03 -2.1 0.2 29 43 620 634 620 636 0.77
Sequence Information
- Coding Sequence
- ATGATGTACCAAGCTATGGAAGCAGCGGGCAGTTCCATGACTCTTTCCGAGGCTGCGAGAATATTTGGAGTACCTAAAAGTACTCTATCGCTGAAGTCGAGGTGTTTTACACCTATTGATTGCAGAAAAGGTCCGTCAACTATCCTGAGCAGTGAGGAAGAGAATTATTTAGTAAGGAGCAAGAAAAAGAACccctttaaaaataatcgacCAGGAAAGCATTGGTACAATGCTTTTATGAAACGTCATCCATCATTAACGAAAAGgatttctcaaaatttaactaCTACCAGAGCAGCTGTCACCGAAACTGATCTTCGCGGGTGGTTTTCTACAGTTCTCGATTATTTGGAGAAGAAAAACTTACTGTCCATTGATGCTAAGCAAGTATTTAACCTTGATGAAAGTGCCTTCATGATGGTACCTAAAGATAATACTGTAATTACTAAGAAAGGAGCAAAATCAGTATATCAAATAGTCAGTGCCAGTGACAAAGCCTGCATAACTACGTTGATAACTGCTTCTGCTTCTGGTGAAATGGCACCACCTATGATTTCGTTTGACAGTAAAAaagctccaaaaaaaaatattttggataaTATTCCTAACGGGTGGGGAGTCGGTCATACTGAAAGTGGCTGGATGACAGCGGAGAGCTTTTactattacataaaaaatgtattctttAAGTGGTTGAAAGAAAACAACCATCCATTTCCTGTAGCTCTTTATGTTGACGGCCATTCCTTACACTGCACTCTTCCTCTGGTAGAATTATGTCAAAAAAATCAGATTGAATTGATAGCTTTGTATCCTAATGCAACCCATATAATTCAGCCACTGGATGTTGCATTATTTCGGCCTTTAAAAGCCTCTTATGCAAAAGAATACAGAAGGTATGAAATTGAGAATGATGTAGTCGACTTCAAAAAATGGATGTTTGCTTCAGTTTTAGAGAAAGCTCTCGAAGCTGTTGACTTTAGTAAAACTATTCAAAGTGGATTTCGTGCTACCGGCTTGTATCCATTTAATCCGGATGCTGTTAATTATGATGTCCTCaacaaaaataccaaaaataaaaattgttccGAAGCGTGTACGTCAAATAATAGTGAAGATAACATAGAAATTGATTCAAATGTTCAGCGTCAAGTggaatttttacaaatattggAAAACCAAATAATTCCGCGAAGTAcacttgatttatttaaaaagcaCGAGACAAATACATCTTGGACGGGTGACATTAAACTGGAAGGACTCTTCGAAGCGTGTCGTAAAGAGAGTGCGCAAGATAGTCGTAACAGTGAAGAGTCGAATGAAGTATATGATAAttctaacttaattaatattaatgattcAATTTATTCAGAATGTAGTTTAGATACACAAGAAAATGATAATGTAGCTATAGATTCTGAGCATACACTAGCAGTTGAAAATACGATTGACGGTGAATTATTGCAAAACAGTTCTCTTAAATACGATATATTAACAAATCCTACGTTAAGTATGGAAATCGTACAAGAGTCTAAACAAAACATTGTTTTTTTCCCGAATGAAGCATTATCTGACTTGATACAATCAGACAGTTCCGAAGAATCAAGTTCTGTGAATGTAATGGAGTTAATTGTTGATACTAATTTAAGtatacatgaaaataaatctAATTTGCGATCAAATTCTCCATCTGTGTGTATTAATACACCTGAAATCACCGTCGAAGCAAGTGCTAATTCTAAGTTGAAGCATAAAGagatagaaaatatatttgaagGTTGTGAATCTGTTTTAGATTTATCATGTCACTCTAATAATTTGGATGAACCAAAGAATTTGTGGACTGATAATAGTAGTAAAACTACTCTAGCAAGTAGAATAAAAAcaagtacaataaaaaaaagaaaagaaaaatgtctGATGAAAATACTCCAATTGCTTGCACTGTAG
- Protein Sequence
- MMYQAMEAAGSSMTLSEAARIFGVPKSTLSLKSRCFTPIDCRKGPSTILSSEEENYLVRSKKKNPFKNNRPGKHWYNAFMKRHPSLTKRISQNLTTTRAAVTETDLRGWFSTVLDYLEKKNLLSIDAKQVFNLDESAFMMVPKDNTVITKKGAKSVYQIVSASDKACITTLITASASGEMAPPMISFDSKKAPKKNILDNIPNGWGVGHTESGWMTAESFYYYIKNVFFKWLKENNHPFPVALYVDGHSLHCTLPLVELCQKNQIELIALYPNATHIIQPLDVALFRPLKASYAKEYRRYEIENDVVDFKKWMFASVLEKALEAVDFSKTIQSGFRATGLYPFNPDAVNYDVLNKNTKNKNCSEACTSNNSEDNIEIDSNVQRQVEFLQILENQIIPRSTLDLFKKHETNTSWTGDIKLEGLFEACRKESAQDSRNSEESNEVYDNSNLININDSIYSECSLDTQENDNVAIDSEHTLAVENTIDGELLQNSSLKYDILTNPTLSMEIVQESKQNIVFFPNEALSDLIQSDSSEESSSVNVMELIVDTNLSIHENKSNLRSNSPSVCINTPEITVEASANSKLKHKEIENIFEGCESVLDLSCHSNNLDEPKNLWTDNSSKTTLASRIKTSTIKKRKEKCLMKILQLLAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00996961;
- 90% Identity
- -
- 80% Identity
- -