Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.00086 4.2 8.1 0.3 22 33 3 14 1 16 0.87

2 6 0.049 2.4e+02 2.5 0.1 22 27 27 32 24 38 0.79

3 6 0.0052 26 5.6 0.1 22 33 51 62 47 65 0.83

4 6 0.0053 26 5.6 0.1 22 33 75 86 72 89 0.83

5 6 0.0031 15 6.4 0.1 20 33 97 110 93 113 0.82

6 6 0.0063 31 5.4 0.1 22 33 123 134 120 135 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.00086	4.2	8.1	0.3	22	33	3	14	1	16	0.87
2	6	0.049	2.4e+02	2.5	0.1	22	27	27	32	24	38	0.79
3	6	0.0052	26	5.6	0.1	22	33	51	62	47	65	0.83
4	6	0.0053	26	5.6	0.1	22	33	75	86	72	89	0.83
5	6	0.0031	15	6.4	0.1	20	33	97	110	93	113	0.82
6	6	0.0063	31	5.4	0.1	22	33	123	134	120	135	0.82

Coding Sequence: ATGCTAGTCTGTAATCAGTGCAATTTAAGATTGCAGTCTAAGATTTTGTTTGCGTTTCGCGACATAATAGACGTACTAGTCTGTAATCAGTGCTATTTTAGATTGCTGTCCAAGATTTTGTCTGCGATTCGCGACATAAAAGATATGCTAGTCTGTAATCAGTGCAATTCTAGATTGCAGTCCAAGATTTTGTCTGCGATTCGTGACATAATAGACGTACTAGTCTGTAATCAGTGCAATTTTAGGTTGCAATCCAAGATTTTGTCTGCGATTCGTGACATGAAAGATATACTAGTCTGTAATCAGTGCAATTCTAGATTGCAGTCCAAGATTTTGTCTGCGATTCGTGACATACTAGACGTACTAGTCTGTAATCAGTGCAATTCTAGATTGCAGTCCAAGCAATTTTGTCTGCGATTTGCGACATTATAG
Protein Sequence: MLVCNQCNLRLQSKILFAFRDIIDVLVCNQCYFRLLSKILSAIRDIKDMLVCNQCNSRLQSKILSAIRDIIDVLVCNQCNFRLQSKILSAIRDMKDILVCNQCNSRLQSKILSAIRDILDVLVCNQCNSRLQSKQFCLRFATL

Sequence clustering based on sequence similarity using MMseqs2