Mman019732.1
Basic Information
- Insect
- Microplitis manilae
- Gene Symbol
- -
- Assembly
- GCA_030273425.1
- Location
- CP092725.1:24371022-24371416[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-13 1.9e-10 41.4 0.2 5 38 1 34 1 38 0.95 2 3 2.1 3.4e+03 -1.1 0.0 9 26 42 58 42 59 0.67 3 3 1.6 2.6e+03 -0.7 0.0 23 30 75 82 75 82 0.88
Sequence Information
- Coding Sequence
- ATGGCGAAAGCTGTTGAATCTGTAGTCCGTGGAGAAATGGGATATAGTATTGCTGCAAAAACTTATGGAGTTCCAAGATCAACACTTAGACGAAGAGTGAattactatcaattatttaatgactTGGAATATGTGTCATCTAAagAATTGACTAATAAATTGGCTTCAGTTTTCAGTCCAGCTCAAGAAATTGAGTTAGTGAAGTATTTGAAAGACTGTGAAGCTAGATTATTTGGAGTATCCAATTTTGCAACACGAGTTCTGGCTTACCAGCTCgccgaaaaaaatgaaatcaaGCATCTGTTTGTTAACTGA
- Protein Sequence
- MAKAVESVVRGEMGYSIAAKTYGVPRSTLRRRVNYYQLFNDLEYVSSKELTNKLASVFSPAQEIELVKYLKDCEARLFGVSNFATRVLAYQLAEKNEIKHLFVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -