Mman002737.2
Basic Information
- Insect
- Microplitis manilae
- Gene Symbol
- lola
- Assembly
- GCA_030273425.1
- Location
- CP092721.1:508563-513615[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-15 2e-12 47.7 0.0 2 42 376 417 375 420 0.94
Sequence Information
- Coding Sequence
- atGAGTATGCAACAATTTTGTCTAAGATGGAATAATCATCAGCCAAACTTTATATCAGTGTTCTCAACTCTGTTAACAAATGAAACTTTGGTTGATGTGACATTAGCTGCTGAAGGCCGGCATTTACAAGCACACAAAGTGGTATTGTCAGCCTGCAGTACATACTTTCAATCATTGTTCACTGTTAATCCATGTCAGCATCCAATAGTTATATTGAAAGATGTTAAAttttctgaattaaaaataatggttGATTTTATGTATTACGGTGAAGTTAATGTGTCACAAGAACAATTACCTTCAATTATTAAGactgctgaaagtttaaaaataaaaggacTCGCTGAAATGCATCCAGCGACGTTAACCAAGTGGCCAAGTGGTAGCAGTGACCCTAGCGGTGGAGATCGTGGTGAATCATGTTCACCAACTCCATCTCCAATGTCGCCTTCATTGAGGCGTAAGAGACTGAGAAAATCGTCGACTGGTTCGGCATCTGGATCTGGTGATAAACAAAATGAAGAAATGGGCGAAATAACACTTGTTGCTACAAATGTTGTTAAACCCGAGCCATTGATAGTCTCACAAGATAATCGTGATAATATAAGACGTCCAGTAAACACTAATACTGAATCACAAGGCAGTATTGACGAGGATCAAATATCTATTatgaGTAATATGGAAAGTAGTACAACGACAACACTCGCTCAAAGTGAAGGCTCCGTGCACGATGTAAGCCATCAATCTGGGGCAAATGCAGGCCAAAGTTCATCACTCTCGTCTCAAGCACCAGCACATCAAGGATTGCAATGGACAATCATGGAGCATACGTATCCACGTTTCGCTCTATCCTCGTGTCAAACGAATCTGTCGATTCAAGCATCATCGGCGTTCACGACGCCCGAAATAACGGCGTCATCGAGCACCAACGATCAGTACCCGGGTACCAACACCACTGGTTCTAGCTGTGCTATGAACAGTTATCCAGGATCACCTCATGGACTCCAGCATACGTCATCATCAGGTGGTCTATCGCCCTCTGGTCAGTGTTCAAATAGCTGTCAAAGTCCCTGTGCCAGCCCACAAGCAACAGTTAAGCGAAAAAGATCAACAAATCCACAAgctgatgaaaattttatacgaGCTTTAGATGCAGTTCGCTACGGTGGGATAGGGTTCTGTAAAGCCGCAAGAATGTTTGGCGTTAACAATCGAACACTTTGGcttgaatataaaaaacgtGGATATCCAAATAACCGACCAAGTGTTAAAtcaaaagttaaaaatgaatCCAACTCATCGCCATCCTCTCCACCAGTACCACCACCCGTCGAACCACCAAGTCCATCTTCCATGGGTCCACCGACAACTCCTTTAAGTGCTCACAGTGCACACAGTGTTCACAGTGCCCACAGTGCCCACAGTACTCATAGTCCCCATAGCGCTCATAATATTCACAATACTCATGCTATGATACCCACTCACGCTCCCCACACGATGCTCGcgCACCAAAGCAAACAGGTTGAGGGAAAACGCAGTCGTTTGCTGCTAATGCGACAAACGAGAGTGAAAAAAGAATCAGAGCCAGGACACCCGTCGCCAGACAGCGAGCCTGGTTCTCCTCGAGTGATTTCATCACCGCAATCTCACTCAGTTACTCCGATATTGAATCTTCCTTCGTCCTCGCAGCATTGGCAAGACAATGAACCGCCACAGGGAGCGACATCAAAACAAACTCTATTAACAGTAACAACTTGTACAAATTTGTTAACTGTACCACAGCCATCCTACTTAGTGAAGCAGCACTCTCATCCACTTTTGCCAAGTCAGCAGCAAAGTTCATCAAGTAATTACTGGATTCAACGACAGCACTCAAATCCCGAGTATCCTGGACGTTCTTCAAGTCCTTCTGGAGCCACAGATCCGATTCCACTTATTAAGATTGAGGAGGGACAGTCCGAGTCACGGATAACTAAAGATACCGGAAATAATTCAAGCTGTTTGAGAATCATACCTGCTGAATTACTCCGAAGTTCATCAACACCACAActCGGTAGTGGAAGAGAAATAAGAACAATAAGAGAAGGAGGAGCAAGCGATCAGCGGTCGGGTCATTGCCCAGTTCAACGAGACGGACCAGCATTGGGATGTAATCATTGTTGGAATACCGTTGATACTCACGGCCGTACATTGAGGCGTAAAACAAAATACCATTGTCCAGAATGTCAAATAAACTTGTGCATTGTACCGTGTTTTCAAGAGTTTCACGAACGTCAGCGTGAAAATTCAACCATAAAAACATTACCAAAAACTAGCTCAATCTaa
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSTLLTNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSELKIMVDFMYYGEVNVSQEQLPSIIKTAESLKIKGLAEMHPATLTKWPSGSSDPSGGDRGESCSPTPSPMSPSLRRKRLRKSSTGSASGSGDKQNEEMGEITLVATNVVKPEPLIVSQDNRDNIRRPVNTNTESQGSIDEDQISIMSNMESSTTTTLAQSEGSVHDVSHQSGANAGQSSSLSSQAPAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEITASSSTNDQYPGTNTTGSSCAMNSYPGSPHGLQHTSSSGGLSPSGQCSNSCQSPCASPQATVKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSVKSKVKNESNSSPSSPPVPPPVEPPSPSSMGPPTTPLSAHSAHSVHSAHSAHSTHSPHSAHNIHNTHAMIPTHAPHTMLAHQSKQVEGKRSRLLLMRQTRVKKESEPGHPSPDSEPGSPRVISSPQSHSVTPILNLPSSSQHWQDNEPPQGATSKQTLLTVTTCTNLLTVPQPSYLVKQHSHPLLPSQQQSSSSNYWIQRQHSNPEYPGRSSSPSGATDPIPLIKIEEGQSESRITKDTGNNSSCLRIIPAELLRSSSTPQLGSGREIRTIREGGASDQRSGHCPVQRDGPALGCNHCWNTVDTHGRTLRRKTKYHCPECQINLCIVPCFQEFHERQRENSTIKTLPKTSSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00380437;
- 90% Identity
- iTF_00380437;
- 80% Identity
- iTF_01005306;