Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_030273425.1
Location
CP092730.1:19602449-19614576[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-17 1.6e-14 54.4 0.1 1 45 457 502 457 502 0.96
2 2 3.1e-18 5e-15 56.0 0.0 1 43 894 937 894 939 0.94

Sequence Information

Coding Sequence
ATGGCGGATTGTCCCTATGCTCGCTGCATACAGGAACGCAGACATATTCGAAGAGAGTTGCTGCGATGGACAAAGAATATGGTTTTCGTAGTCGGTCTGGAACGAGTAGCAGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAGTATCAGGATACCCTGTACAGCAGCACTCGGAGCGAATCAGCTACGCAGCCACATCATCGGCTCTATCCGACGTTTTCAACCGTTGGCGACTCAAGTACTGGGAGTTTGAACCAGGTGAGCCATCATCGAACATCATTAGGCCCAAGCCCAACGGCAACGACGACACCAGAATCAATAGTTACAAAGCAACAACTGACCGATCACAAGAACGACGAACATCAGCTTTGTTCAAAACCCGAAGACATAAAGGTCAAGGTCGAAGCGGCAGTAGACAAAAACGGTATTTTCCCAGAGTCTTTGCAACATGGAGAAGTTCTTGTCAGTTTAAAACAGCATTCAAATCAACGATTAGACGACGAAAGCAACGGGAAGAAAAACAACGAGAACGATTCAGAGAGTGTGGACATAAAACTCAATCTCGAAGACGAAAAGGTCAAAACGCCTGTCAGTCCCTTACGAGAAAACAACAAGGGTGCGAAAGACGAGCCTACAGATACGAAAGAAACGAagGAACAGACGGAAAGTTTATCGAATCAAATACAAGTAACGCCGTGTCTATTGCGGGTAAAGAAAGAAGAAGAGCTGCAGGAATTACCGCTACAGGTGAACTGTGGAGAAACAATCAGAAGCGTCACAAATTcagaaataaacaaattagtAACAACAGCAGAAAGTACAGAAGAACAACAAACATCTATAGGTTGTCCTCCGTTACTTTTCCATCGGCATACAAGTCCACCACCAGAGGACTGGAAACCTCTAGATAAGTGTTGTTTGTGTCTCGATGGAAAATTACTTCACGAAGACCAACCACCTCTTagtCCTCAAAGCGAAAGCAGCGGTAGTTCGAGATCTGCAGAGTCACCCATGTCTGTGCAAGTCGACCCGATGGCAGCCTCCGTGGTTGCAGCCGCACTCAGTGGAACATACCCGACCTTATTGCCACAGTGGTGTCTACCACCTAGAGAAACACCCCTTATGGTTGTACAGTCACTTCAAGAAACCGGCCAGTTATCCGATCAACCACTCGATCTCTCAGCGAAACCGAAAAGTTCTCAGgaAAATAATATATCTGTGTTAGAACAACAAAAAATACCTCTGAGAATGCCGACGGGGTTGGATCCTAAAAGCATATTTGCTTCATCTTTCCGCGCCAAGCCAAGATTGACGGGTCCAGTTGGAGTTGGCGGTGTGTCGGTGGTAGGTAGTGGAAGAAGAACTTATACAGAAGAAGAGTTACAAGCTGCACTTAGGGATATCCAAAGTGGAAAACTTGGAACAAGAAGGGCAGCTGTGATCTATGGAATACCCAGAAGCACCCTACGTAATAAGGTCTACAAGCTTGCAATGGAACGTGAAAGAGATGCGTCTCTGACTAGCACCCACTCACACACCCACGAGTCTGGTGTTTCAGCATCAACCAATACAACTACCATattaacaacaacaacaataactacaacaacagcaacaacaccATCTACACCAAATACGACCCAAAATGCCTCCGCAATTACTCCGTCCTCGCCAATGGATGAGTTTAACACTCGGCTACTTGATGCTCGAAAAATTGTGAAAACTGAGACGGATGATAAAGAACTCTCCGGTGCTGAAGAAGAAAAGGAAGTAGAGAAAGCTCTGCTGAAGCCTTTACTTTCACTAGAGGATCTCGTAAGATTTTCCGCTTTAGAATCAGGAAGTGGAGACTCGCTAAGAACTCTGCTTCAACGTGGACAGGAATCAGGTACGGAATGGCCAGGTTTCGAGCATCCCAACATCGGACCATACATTCAAAAAATGCTAGCGGCAGCGGCTCCATTCAAAGATTTGGAGTCTCAAGACTACAAAATACCTGAAGCTATGAAACGGCTTATGAGTGAAGACAAGAGAATACACAACAATATTAATGGAGATCAAAATCAACAACAGCTGCTTCATCAATTTCACCAGTCATCACAAGCGTCGCAGCAAGCTCAACAGCAAAAACTACCCATGACGAACAATGATTTTAATCCAAGTATTGAAGAAGAAGCAAGTGACAGTGCTCAAGGTAGAGCTATATTGAAGATTCCGTCCTACAAGCCAGCAGGCACACCAGGTTCGAGCAAAAATAATGGAGAACCATCATCAACTGCATTTGCCCAAGGTTTCGCAGCGGTCTCTAGTACTGCAACGAGCCCTGGTCTTATAGAACGCGCAAGTCCAGCTTTCTCAGGAACAAGTAGTCCCACGAATTCTCTTGTCGGTAAGGCAGTAGGCGTCAATTTTCGTGACGTTATAGCAAAGAGCATCAGCTCTAAGTTTCAAGATGGACAATCTAATTTGACTGGCCAACCGTCAGTTCCGGGTCAAACAGCTGCAATACTCAGTGAGTCAAATCCATACAAAAGAGGACGATATACGCCACCTCAGCAACTGCAATCTCAGCAACAATCACAAATACAGCAACAGAAGCTTCAATCGCAAGACAGTAAATCAAAACCAAGTTCTGGTGGCAAGGGTACTCGGCCCAAGAGAGGCAAATATAGAAATTATGACAGGGATAGTCTTGTTGAAGCTGTTAGAGCTGTACAGAGAGGAGAAATGAGTGTTCACAGAGCAGGAAGTTACTACGGAGTACCACATTCCACTTTAGAATATAAAGTTAAAGAAAGGCATCTTATGAGACCACGAAAGAGAGACCAAAAACCTCAGGATGAAAAAGCTAAGGAATCTACCACTACCACTGCGGCTGTACGACCTGGTTCTCAGGATAAGAAACCTCCTTTGAAAACGCAAAAAACGTTTGCGACTGGTCCAGGCAGTATATCAGGTCCAAACGGCCTTAAAATACCAccatttttagaaaatatgcCGCATTTGCCCTTTCCACATCCTTTTAACTTTTGGGGCCCACCGCCATTTATGTCTTCGCCCTTCATTCCTGGTGCATCCAATGTGCCAACAATTCTCCCAGAGCAGTACTTTGCGACACAAAGAATACGAGGCTTACAAGAACAGCAGCGAAGTGCAATAGTACCACAACAAAGAGATAAAGATACTACAGGTGCTGAATCAGAACCAGGAACATCTAATTCTCGAGGCTCGTCAATAGTAAAGACCACCAGAGAAATGGCTGAAAGTCTTTACGACGGAAGTGGTGCGAACGGAAGTTTTTTAGACAATCTGATTAGGTCAAGTCTCGAAACTGGTATTCCAAGAGAGCAACGATTAAGTACAGAAGGACGAGGTCAATCGTCAACGCCGGTGGGACATTATCATCCTGAAGTAATCGGTAGCAAAGCTTTATTAGATCAACTCTGTCGGAACCCTAGAAGAACGCCGCTACCTAGAGGAACGCAAGATAGTAGTGAAGATGAAAGTTATAGAGGAGCATCCACGAAATCATTGCCAGAGAGACCCGAAAGAGTTCCTACAGTTGATCTGAGCCCTTCGCCCGACGGGACGAAAGTCGACGATCAAGCCAACGACCGCGTCACTTCCCCACTGACCCCGTCGGGGGTCACAAGAGCCGGTAGTCGAGACGAAGACACTCAAGATTCAAAAGTAGATAAAAGCAACAGAGACCCAGAGGTTTATAATGGCGGTCAAGATGACCGAGAACCGAGTAAAACAGTTAGTTTACAGCAACAACAGCTGAACAATTACTCGGATATCCATAACCTCTATCCCGTATCAACCGACAAAAAAAGTGCCTGTGATAGTAAGCTTAAAATAGATCATTCGAACCAGAAAACTCAACATTCCTATTCGCATCAAAAGGATTTTGCAAATGTAAGCGGACTAGTGCAATTGCAAAAAGAGTATAATACCGGTGCGAATAGTAGATCAACTGACGGAAATCAACAAACAAATTCTCAGCCGGCAACCCAGGAGCCTTGCAACCCTGTACTGAGTATGGAAGACTCTATAGAGCAGTAA
Protein Sequence
MADCPYARCIQERRHIRRELLRWTKNMVFVVGLERVAEELMGRRRWKQYQDTLYSSTRSESATQPHHRLYPTFSTVGDSSTGSLNQVSHHRTSLGPSPTATTTPESIVTKQQLTDHKNDEHQLCSKPEDIKVKVEAAVDKNGIFPESLQHGEVLVSLKQHSNQRLDDESNGKKNNENDSESVDIKLNLEDEKVKTPVSPLRENNKGAKDEPTDTKETKEQTESLSNQIQVTPCLLRVKKEEELQELPLQVNCGETIRSVTNSEINKLVTTAESTEEQQTSIGCPPLLFHRHTSPPPEDWKPLDKCCLCLDGKLLHEDQPPLSPQSESSGSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPRETPLMVVQSLQETGQLSDQPLDLSAKPKSSQENNISVLEQQKIPLRMPTGLDPKSIFASSFRAKPRLTGPVGVGGVSVVGSGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHTHESGVSASTNTTTILTTTTITTTTATTPSTPNTTQNASAITPSSPMDEFNTRLLDARKIVKTETDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALESGSGDSLRTLLQRGQESGTEWPGFEHPNIGPYIQKMLAAAAPFKDLESQDYKIPEAMKRLMSEDKRIHNNINGDQNQQQLLHQFHQSSQASQQAQQQKLPMTNNDFNPSIEEEASDSAQGRAILKIPSYKPAGTPGSSKNNGEPSSTAFAQGFAAVSSTATSPGLIERASPAFSGTSSPTNSLVGKAVGVNFRDVIAKSISSKFQDGQSNLTGQPSVPGQTAAILSESNPYKRGRYTPPQQLQSQQQSQIQQQKLQSQDSKSKPSSGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKPQDEKAKESTTTTAAVRPGSQDKKPPLKTQKTFATGPGSISGPNGLKIPPFLENMPHLPFPHPFNFWGPPPFMSSPFIPGASNVPTILPEQYFATQRIRGLQEQQRSAIVPQQRDKDTTGAESEPGTSNSRGSSIVKTTREMAESLYDGSGANGSFLDNLIRSSLETGIPREQRLSTEGRGQSSTPVGHYHPEVIGSKALLDQLCRNPRRTPLPRGTQDSSEDESYRGASTKSLPERPERVPTVDLSPSPDGTKVDDQANDRVTSPLTPSGVTRAGSRDEDTQDSKVDKSNRDPEVYNGGQDDREPSKTVSLQQQQLNNYSDIHNLYPVSTDKKSACDSKLKIDHSNQKTQHSYSHQKDFANVSGLVQLQKEYNTGANSRSTDGNQQTNSQPATQEPCNPVLSMEDSIEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2