Basic Information

Gene Symbol
ARID5B_1
Assembly
GCA_030273425.1
Location
CP092727.1:1139241-1159798[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-23 5.8e-20 72.6 0.0 2 89 479 564 478 564 0.95
2 2 10 3.9e+04 -10.4 8.2 51 63 870 882 842 902 0.54

Sequence Information

Coding Sequence
ATGCCGACGGTATGGGGGCACACTAGCATCCCAGGGTGGAGAGAGAAAGACCAAGCGGTTTTGAGTATAGATAGAGACAGAGAAGGATTACTGGGGAACGCATGCTTTAGTCATGGCCCATATACATTCTACAAAgctgttaaaataaataataatcgtgTACTACGattaggtaatttttttttaacaaaattatgGACTGACACGGATTTAGTCAGTATTGGAGAGTTACAGCTGTTATGGATCGACAGTCGCGGATCCAATCAGCCATTAGCATCTCTAAGATTATATTTCCTCCCCGAAAACACACCTGACGGCCGACGGGACATCCACGGCGAGGATGAAGTATTAACAATATCGGAAAAAGTAGTTGTCCACGTGCATGATTTAGTATCATGGCTATCGCCAAATTTAGAGTGGACTTGGGGTCGAGAAGTAATACTACCACCGCCATCTGCTTCTTTACCTCCGTCGCCGTCGACATCGTCACCGACGTTATCGACGGCAACGTCACCATCGTCACCACCACCACCATTACCGACATCTAAATCTATACTACCGACCGGCGATGAAGTTCTTGGCAGTGTCGCTGCAGCTGCTTCCAGCACTTCGACAGTCGATACAATCGATTTCGGTGTCGATAAGAAACCCGAGTTGATACCTCAAGTTCTTACTGACCCTGGTATCGACTTCACCGACGTCgaaaaacaagaattttatGACAACTACGAatgtaaaaacttgaataataataatgacgatGCGTCGTCATTTTCGTCGGTATCGACGGGAGTGGGGGTGGGGGGAACAGGGCAAGGAGTGGGAGGCAAAAATACACGAGTGGTGGTATTGTCTTATCCGAGGTATTGCCGATACCGGGCATTGTTAAGACGATTGGAGGGCTCAGAACCATCTTGGCTCTGTACTTCAGTGGCTGCGGCGCTAGGGGGATTTACTGCGTTACCTGGTACACGTGTATTGTTTTGTCGAGATACGTTCGATTATCCAGATCTCGAAACTCATGAACTTTTATGCAATCATTTGgcgcCAAAATTAAAAGGCAGACCAAGAAGAAAACGTAAAAAACGCAGTGCATCACCCGGTGAATCGAGTAATGAAAGTGAAGCATCTGTCGCATCAACATCTCGTGGATCTACGACGTCATCATCATTCTCAATAAATTGTCCTCCAAAATCAACAACGCCCCCACAGACATCAACCCCATTAACGTCGTCTCTAACCCCATCGTCGACATCCTTAACCTCAACGACGGCAACAGCGACATCTTCGACACTATCGACCTCTACAACGACCGCATTGACGTCATTAACAACGACGTCATCATCGTCAACACCAGCGACACTGTTAATAGCGTCAGTGGTATCTGGCCGAGGAGATGGTGTCAGACGAAGCGAGCGGAAGGTTACGGGggatgaaaaaaagtttataatcgACGTACAAACTTTTATGAGTTTACGCGGCACTCCAGTACTGAAAATGCCGCTCTTAGGTTATCGGCAGATCGATTTGTATTTGTTTTATAAACAAGTTCAAAAACTTGGCGGCTATGATACGGTGACGTCTGGACGTCTTTGGAAATCGATTTATGATGAAATTGGAGGTAACACTGGTTCAACTAGTGCTGCTACAATAACACGCAGGCATTATGAAAGgttacTTCTACCTTACGAACGTCATCAACGCGGTGAAGAAACAAAAGTCCGACCAGTAAGTCGTCGCAGTAAATCGATATCCGATTTACCAATCGATTTACCAGAATCACCTAAATCACCGCCAACAGCCGCCACGACTACAACGCCATCTACAAAATCTCCGGTGCCCACATCGCCGGACGCCAATTGTCTAACTAATAATTCTAaccttaataataataataataatagtaataataataatagtaatagtaataataataatatcgtgAGCATTCCCGATAAACCAAAGACTGAATTAAAACCATCATCATTACGCAGTGTCCGCGTAAAACCCGAGCGTTTAAAATCACTATCGctttcatcatcatcatcatcctcatcatcatcaacgtcatcatcaccatcaccGTCGCCATCTCCATCATCATTAACACCAACAACAACTCCCCCTACATTAAGTTTATCACCatcacaacaacaacaacaacaacaacagccatcaattatagaaaattcgttaaatttaccgccaaatttgaataatttaaatttaccgccaAATTTACCTACAACAACAATCGATAATGATaccacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaaatttaACAACACAACTAGATTGTGATgttaaatatgataataattcaaataatgataatttattaccacaaaataaagaaaacattccaatttttgttattaaacaacaacaacaacaacaacaaaatcTACAAAAAGAGCAACAACAATATTTACAGCAAGATCAGCCACAAAATTTACAACAAGACCAGCAACCAAGtttacaacaacaacagcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaactacaactacaacaacagcagcagcaacaacaacataAACAACAACAGCATGAACAACATGAACAACAaccacaacaacaacaaccacaacaacaacaacaacaacaacaacagcatgAACAACAAGAACAtaaacaacagcaacaacaacaacaaaatttacaaaacgAGGAATATCAAGATCAgccatcaaatttattacaaaaacaacaacaacaacaacgacaaaatttacgaaaagagcaacaacaagaacaacaacaaaaacaacaaaaatcaaaatcaccGCCATCACCAGAAGTTATTGATCTCGAATCAGAATCAGATAACCCACCAACACcaccaacaacaacaacaacaacaacaacaagagataaaataataataccaagttttaaaaaacgtAAACTAGAAATACTACGCGAAGGCGGTCTCGAAGTAACGGCCGTCGACCTCGCGGACCGTCCAACAGTAATTCAAACCCACCCGCCATTACCCCCAGCCAATTCCGCCATTTTGTCGTCAAACTCAACTGCTAACCTCAACGTTAAAGACGAGAAGCCCCAGAAATTGATATCTGTCACCGTCACTCCAGACATTACGCACATGCTGGCCTCCCCCGAAAaatacaacaacaacaacaacaacaacaacattaATAACAGCACCGGAAAGaagtttataaattctttGCCGCCAAAAGTGATCCAGTCCCACTCAATATTTTCCGGCAACGACAAGGTCGTATACGGGAACCCTAAAGATATATTAACTGCCTCTAAGTACGTGATTAATACACCAGATGTCCTAGATCTCACTAAATCTGCGCAGACCTTTTCCCGCCCTAACCTCGAAATCGTGCGGGTTCCGATCGTCCCCCGCCCgcaattattcaaaaattccattacttcaaatagtaataacaGTAATAGTTACAACAATAATCACAACCACAGTGACAACTACAGTAATGATAAATTACCCGGTGTTAATATCGATAAATTATCGACGAAAGTCAATTTACCGATACTCGACTCCCGCACCATAGCctcaaataatttagaaataacttTAGTCAGcccgaaaaattataataataacaataataacaaattgtCAAATTACACTAGTCCGCCGCTAAGACAAAATGGCGCCAGCGCTCTGGTgtcgaaaataaaaactaataagcTTCATACAATCGAAAGTCCCTATGCTCGAAAAGCAAACAATCATATTGTAAACGTaccaaatttgaataatttacacTATGGTAGTGGGGGAAATAGTAGACCAATGACGTCGACGTCATTGAGGGTCGAGAAAATGGCGGCTGATGGCAGCAATAGACGAATAAGCGAAAGTGATCTACCAAAATACAGTAACTATGGCAACAAAATGTCGTACTTGCAACAAAAAAGCGATAGGGATCGTGAGCGTGATCGATATGACAGAGATCGACATGATCGGAGGCACAGTGTCCCTACTTTACCGACTGGTTTTATGTCAGGGTTAAATACGACGCCATTTTATCCACCGCCACAGCCGCCATCTTCTTCGGCGACTGGAGTCAttcataataacaaatttataccGCCGGGGCCGATGATCGACCCGATTTATTACTCAGCGATTTACAATGGGCTGTTCAGCAGCGGACAGGTGGCGCCAACGGTCACGAGCTCGATGCGACCACCGCAAATTGGTCATGGAACGATAACCTCACCGATAAACAATAACTCGGGGTCACAACATGGATATTTACCGCCAATTGAGTTTAATGActactataaaaatttcctaacctcacaacaacaacaacaccaGAGATTGCTGATGATGAGTCAGCATCAATCTGCGCCGacgtctaaataa
Protein Sequence
MPTVWGHTSIPGWREKDQAVLSIDRDREGLLGNACFSHGPYTFYKAVKINNNRVLRLGNFFLTKLWTDTDLVSIGELQLLWIDSRGSNQPLASLRLYFLPENTPDGRRDIHGEDEVLTISEKVVVHVHDLVSWLSPNLEWTWGREVILPPPSASLPPSPSTSSPTLSTATSPSSPPPPLPTSKSILPTGDEVLGSVAAAASSTSTVDTIDFGVDKKPELIPQVLTDPGIDFTDVEKQEFYDNYECKNLNNNNDDASSFSSVSTGVGVGGTGQGVGGKNTRVVVLSYPRYCRYRALLRRLEGSEPSWLCTSVAAALGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSRGSTTSSSFSINCPPKSTTPPQTSTPLTSSLTPSSTSLTSTTATATSSTLSTSTTTALTSLTTTSSSSTPATLLIASVVSGRGDGVRRSERKVTGDEKKFIIDVQTFMSLRGTPVLKMPLLGYRQIDLYLFYKQVQKLGGYDTVTSGRLWKSIYDEIGGNTGSTSAATITRRHYERLLLPYERHQRGEETKVRPVSRRSKSISDLPIDLPESPKSPPTAATTTTPSTKSPVPTSPDANCLTNNSNLNNNNNNSNNNNSNSNNNNIVSIPDKPKTELKPSSLRSVRVKPERLKSLSLSSSSSSSSSSTSSSPSPSPSPSSLTPTTTPPTLSLSPSQQQQQQQQPSIIENSLNLPPNLNNLNLPPNLPTTTIDNDTTTTTTTTTTTTTTTTTNLTTQLDCDVKYDNNSNNDNLLPQNKENIPIFVIKQQQQQQQNLQKEQQQYLQQDQPQNLQQDQQPSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQLQQQQQQQQHKQQQHEQHEQQPQQQQPQQQQQQQQQHEQQEHKQQQQQQQNLQNEEYQDQPSNLLQKQQQQQRQNLRKEQQQEQQQKQQKSKSPPSPEVIDLESESDNPPTPPTTTTTTTTRDKIIIPSFKKRKLEILREGGLEVTAVDLADRPTVIQTHPPLPPANSAILSSNSTANLNVKDEKPQKLISVTVTPDITHMLASPEKYNNNNNNNNINNSTGKKFINSLPPKVIQSHSIFSGNDKVVYGNPKDILTASKYVINTPDVLDLTKSAQTFSRPNLEIVRVPIVPRPQLFKNSITSNSNNSNSYNNNHNHSDNYSNDKLPGVNIDKLSTKVNLPILDSRTIASNNLEITLVSPKNYNNNNNNKLSNYTSPPLRQNGASALVSKIKTNKLHTIESPYARKANNHIVNVPNLNNLHYGSGGNSRPMTSTSLRVEKMAADGSNRRISESDLPKYSNYGNKMSYLQQKSDRDRERDRYDRDRHDRRHSVPTLPTGFMSGLNTTPFYPPPQPPSSSATGVIHNNKFIPPGPMIDPIYYSAIYNGLFSSGQVAPTVTSSMRPPQIGHGTITSPINNNSGSQHGYLPPIEFNDYYKNFLTSQQQQHQRLLMMSQHQSAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01005799;
90% Identity
-
80% Identity
-