Basic Information

Gene Symbol
grh
Assembly
GCA_030273425.1
Location
CP092725.1:9270652-9294942[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.25 4.9e+03 -2.3 0.6 89 112 33 56 10 94 0.64
2 2 5.1e-63 1e-58 199.4 0.0 25 221 475 673 461 675 0.92

Sequence Information

Coding Sequence
ATGTACagtgttttaacaccggtCAGGCGTAGCCGTTCGTCATCAGACTGTGAATCAAGTGTTGTTGGTGTATCAGAACAATACGGTACAGTAGGCCGTGAATCAGCAGAAGAGGAAGCTGATCATCATCAACAACATCACCAACAACATcatcagcagcagcagcagcaacaaccacaacaacaacaacacgGAAATCAAGTTGACCCAGACGATCCAGAGGAAGCATCAAAACGTGTTGCCGCCGTACAAGTTCAAGTTCAGGGTATGGAGGGTGATTGGAGGGCATACTGTGAGCATCCACTGACGGCTGCTACCGCGGCGATGCTAAATTTACAACAGCAGCATCAGGTTGCCGCAGTATCTGGACATCCCGATGAACAAAGTGTTCCTTATGTTTACGAGTACTACAAATTGCCGGACAATAAACCCTCTGATGTTAAATTACCGCCGACTCATGAGCTTTGGACTACAGGAGTTATGGGCCAAAAACTATTGGTTGAGAGCACTGGATCAAGACTGGAAAACTCGGAGAATAATGGCAGTGGTGAATTGCACCACTTTTTGCATCAATATAATCAACAATCGCCGAGTCCTAATCAGAGTTTGCAAGGCAATATTCCGATGCCATTGAGTCCACAGTCTTTGCGGCACGACGGGTCTTCAGGTATTGGAATTAAAAGAGAACCAGAGGATTTGAGCTCCTCGCGTGGTGGTCAGCAGTCCAATAAACGGCATAAACAAGCTCAGCCCGATAGTCCTACGCCGCCGGGAAtgtatcatcatcatcagcatCAATTACAGGTCCAGCAATACGGTAGTCCATATGACCCATACTCGGCATGCAGCCCACGGCTATCAACCTACAATTCGGGTTCAAACGCCAGCGGAAGTGCAACACCGGGTTTACACCAAGAAGGCAATACAGTCTACGTAACGAGTGAAGCGTTACCACCCCTAGCATCATCTAGTTCAGCTTCATTACCAACTACCACGTCGTCGTACACTAGGTACGATGTTGTTCCCAGTTCGTATACCCATGCAATAAGGTCCTCATCCAGCAGCAGTAAAGTCCTGACTGTTGATCTTCCTAGCCCGGATTCGGGGATCGGAGCCGACGCAGTAACACCCAGACAAGATCATCATCCACCTACAGCTTTACACCAGTCGTCATTTGATTACACGGAACTGTGTCCAAGTAGTAATAACAATGCAACGACAGTGGTCCTAGAAAGTGGTACTGTTGTCCATCACCAACCGTTACAATTGCAATTACAACAGCCGCATAATCAGACCCAAGTTCAACGGGGGCTTGTCAATCCTGCTGCTTCTCCGTCAACGACTCCAAATCCACCACGATCGCGTCCCTGGCACGATTTCGGACGTCAAAATGATGCAGATAAAATTCAGATACCAAAAATTTATTCGGCATatggttttaaatatcatctGGAGTCACCAATAAGCACATCACAGAGACGTGAAGATGACAGAATAACGTATAttaataaaggtcaattttaCGGCATCACTTTAGATTACGTTCCTGATCCAGACAAGCCACTTTTGAAAACCGGACAAACTGTTAAGAGTGTCGTAATGTTAATGTTCCGTGAAGAAAAAAGCCCCGAAGATGAAATAAAAGCTTGGCAGTTTTGGCACGGCCGACAACACTCCGTGAAGCAACGAATCCTCGATGCTGACACAAAAAATAGCGTTGGGTTAGTTGGATGCATTGAAGAAGTTGCTCACAATGCCATAGCTGTATATTGGAATCCATTAGAATCATCAGCTaagATTAATGTTGCAGTGCAATGTCTCAGTACGgatttttcaagtcaaaaaGGTGTTAAAGGTTTACCATTACATATTCAAGTTGATACATACGAAGAACCACCATCACATTCTCATTCATATACTCCACCTTCACATCGTGGTTACTGTCagataaaagttttttgtGATAAGGGTGCAGAGAGAAAGACACGCGACGAAGAGAGAAGAGCAGCGAAGCGTAAAATGACTGCAACAGGCAGGAAAAAGCTTGATGAATTGTATCACTCTGTTACTGAACGCagtgaattttattcaatggCTGATCTTCATAAACCACCGGTATTATTTTCACCACCCGCTGAGCATGCGCTCGACAagTTTTCAACAATGGAATTATCTGGGTTTTACGGAACTGGAAATGGCGGCGGTGATACAGACACATCCTCACTGAGTAATGGTGAGGGTGGTATGAAAACAGGAGCAAGTAGTCCATATCCAGGTTGCGGCAGACCAAGTTTACCAGCGTTAAAATTTCACAATCACTTTCCTCCGGACAATTTAACTGGAATACACGATAAAAAAGATTCTCTATTGATGCAAGTACAAGAATTGCAGGGTACTGTTTTACAAGGAGTACCACAAGGTGCATTGACAACTGCCACTGGCACATTAGTGTCGAATGTTAGTAATCGTCTGCATCTTCAGCATCAACCGCAACAGTCACATCTACGTGGTAATGATTCGGAAGAACGTGTTATGCTTTATGTTAGACAAGAATCTGAAGATGTCTATACACCCCTACATGTAACACCGCCGACGGTACAGGGACTTCTTAATGCTATTGAATCAAAGTACAAAATTGCATCCTCAAGTATTAATAATCTGTATCGAAAAAACGCAAAGGGAATTACAGCGAAAATTGATGACGACATGATCCGTCATTACGTCGACGAAGATTTATTTCTTCTCGAAGTAAGTCATTCAACCTCGCCATCGAATCCCGACCCATGTAATCAAAGTAACCCAGGTTCGCCCGGGGACCCAGATGATCCTAACGAATCATCATCACTGGGTTACGACGTAACGCTCATTAAATTACAAACACAATTGACACCCCCACCTCCATCACTGTCATCATCGACATCACCTTCGACTGTAAATTCTCATATTCACACCCACAATGTCCACGAGGTCACTAATTCGTGA
Protein Sequence
MYSVLTPVRRSRSSSDCESSVVGVSEQYGTVGRESAEEEADHHQQHHQQHHQQQQQQQPQQQQHGNQVDPDDPEEASKRVAAVQVQVQGMEGDWRAYCEHPLTAATAAMLNLQQQHQVAAVSGHPDEQSVPYVYEYYKLPDNKPSDVKLPPTHELWTTGVMGQKLLVESTGSRLENSENNGSGELHHFLHQYNQQSPSPNQSLQGNIPMPLSPQSLRHDGSSGIGIKREPEDLSSSRGGQQSNKRHKQAQPDSPTPPGMYHHHQHQLQVQQYGSPYDPYSACSPRLSTYNSGSNASGSATPGLHQEGNTVYVTSEALPPLASSSSASLPTTTSSYTRYDVVPSSYTHAIRSSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHPPTALHQSSFDYTELCPSSNNNATTVVLESGTVVHHQPLQLQLQQPHNQTQVQRGLVNPAASPSTTPNPPRSRPWHDFGRQNDADKIQIPKIYSAYGFKYHLESPISTSQRREDDRITYINKGQFYGITLDYVPDPDKPLLKTGQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHIQVDTYEEPPSHSHSYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHSVTERSEFYSMADLHKPPVLFSPPAEHALDKFSTMELSGFYGTGNGGGDTDTSSLSNGEGGMKTGASSPYPGCGRPSLPALKFHNHFPPDNLTGIHDKKDSLLMQVQELQGTVLQGVPQGALTTATGTLVSNVSNRLHLQHQPQQSHLRGNDSEERVMLYVRQESEDVYTPLHVTPPTVQGLLNAIESKYKIASSSINNLYRKNAKGITAKIDDDMIRHYVDEDLFLLEVSHSTSPSNPDPCNQSNPGSPGDPDDPNESSSLGYDVTLIKLQTQLTPPPPSLSSSTSPSTVNSHIHTHNVHEVTNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00379404;
90% Identity
iTF_01003987;
80% Identity
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