Basic Information

Insect: Microplitis deprimator
Gene Symbol: -
Assembly: GCA_964016945.1
Location: OZ024714.1:15791300-15818058[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0011 0.16 13.4 0.5 1 21 46 66 46 67 0.96

2 13 0.002 0.29 12.6 0.3 1 21 113 133 113 134 0.95

3 13 0.22 33 6.2 3.1 1 21 171 193 171 194 0.95

4 13 0.0076 1.1 10.8 5.5 1 23 202 225 202 225 0.97

5 13 4.6 6.9e+02 2.0 0.3 5 20 249 264 243 266 0.86

6 13 0.001 0.15 13.5 1.9 1 23 273 296 273 296 0.98

7 13 0.0038 0.57 11.7 0.2 3 21 348 368 346 369 0.93

8 13 0.44 66 5.2 4.6 1 23 377 400 377 400 0.95

9 13 0.00092 0.14 13.6 0.3 3 21 465 485 464 486 0.91

10 13 0.00036 0.054 14.9 0.5 1 21 567 589 567 590 0.94

11 13 0.59 88 4.8 4.4 1 23 598 621 598 621 0.97

12 13 0.0049 0.73 11.4 0.6 1 21 651 673 651 674 0.87

13 13 4.8 7.2e+02 1.9 5.9 1 23 682 705 682 705 0.64

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0011	0.16	13.4	0.5	1	21	46	66	46	67	0.96
2	13	0.002	0.29	12.6	0.3	1	21	113	133	113	134	0.95
3	13	0.22	33	6.2	3.1	1	21	171	193	171	194	0.95
4	13	0.0076	1.1	10.8	5.5	1	23	202	225	202	225	0.97
5	13	4.6	6.9e+02	2.0	0.3	5	20	249	264	243	266	0.86
6	13	0.001	0.15	13.5	1.9	1	23	273	296	273	296	0.98
7	13	0.0038	0.57	11.7	0.2	3	21	348	368	346	369	0.93
8	13	0.44	66	5.2	4.6	1	23	377	400	377	400	0.95
9	13	0.00092	0.14	13.6	0.3	3	21	465	485	464	486	0.91
10	13	0.00036	0.054	14.9	0.5	1	21	567	589	567	590	0.94
11	13	0.59	88	4.8	4.4	1	23	598	621	598	621	0.97
12	13	0.0049	0.73	11.4	0.6	1	21	651	673	651	674	0.87
13	13	4.8	7.2e+02	1.9	5.9	1	23	682	705	682	705	0.64

Sequence Information

Coding Sequence: ATGAATGGGCACATAAGCAAAAATCATCCGGATCCAGCAATTGAGCGCGGGGAATTCCTCGGGATTCTTGTAGATCCCTCGGGAATAAGCGAAGTCAAGCGAGCGAGCAAATCACCGATGGAAGAAACGTCAAAATATCCGTGTGAAAATTGCAACAGCGTTTTTAACCGCAAAACAAATCTGACCTTTCACATGAGATGGGAATGCGGTCAACCTCCTAGATATAAGTGCCCTTATTATTTAATGTTACCGAGTTCGCTTTTGATGCTGGATTATTCTAACGTCGATCCGGAGGCCTTCGATCATcagcaaaaatttattgtaaataaagataaatttcaGTGTTCAAGTTGCCCCAGAATATTTAACTCCGAGTATTCTGTTAAAAGACACGTTAAAGAATGTGGAATAGAGCCGCGGTATCAGTGCGCTTACTattTATTAGTCCCGATGATGCGAGTCTCTTGCCCAAgttacaagaaaaataaacgaCATCTCACATCAGGAAGATACAGATGCCCGAATTCGGATTGCCGAAGATTTTTTAACAAACATCCGAGTTTTGTTCATCATGTTAAGTACAGATGTGGGCAACCCTGGCGATTTGAATGCAATGAGTGCGATTACAAAACATGCTGGAAGCATAACCTCAAAAAACACATCGAAACAAAGCATCTTGTTAAGAAAGAGCCCGCAGAAATTCTCGAGATGGATGCGGATGGAAAATTTCGGTGTATTAACAGCAATTGCACGAGCGCGTTTAGTCACGAGCGAAGTTTGAGGGGACATTTGGAAATCTGTGGAAAACCTCCGAGATACAAGTGCACGTACTGCGATTACCAGTCGCGGTACATCAGCGACGTTAATCGTCACACAAAAACTGTCCATAAGGACACTTGTGTCAAAGCTGTTGAACAAAACGAACATTTGtttaagaaaaagaaatatgaGCGACTGGCAAATGGGCCCTTTGTTTGTAgttatataattcaatatgGCGGGCGCGCAGCAGGGAGAGATCTCCAAGAAGAAGTTTACGGTTGCCCGAATGCAAATTGCAACCGTGTATTTAAATGGCGTAGCAATTTAACGAAACACATAAACTTTGAGTGCGGAAAACCGCCGCGGTTCATGTGCTCCAAGTGTTACTACCGTTCGCCACGAAAACACGACGTTATGAAACACACGACGAAACAGCATCCCAATGAAACAGTGACGCTTGTCGAGTTGTACAAACCTGACAAAGCCAGAGGGGAGTTTAAGTGCCCGAATATGAATTGCGGGAattaTAAAAATCCAATGATTATATTCCCAAATGCAAACAGAAGCCGAGGACCGATTATTGAAAACGACCCATCTTGTCcgattgaaataattgaaataaataacgtATGCCCTAATAAAAATTGCGGTAAAGTATTTCAGACAAGAGAAAGTTTTACCAAACATGTGAATAATGACTGCGGGAAATTGCCACGATTCAAATGTTCGAGCTGCGATTTTTACGCCTGGGAGTCTGGGGTCGTTGTAAGGCACGCGAACACCCAGCACTTGGATCAGGAAACCCTGGTGGTTGACCAGTGGAACCAGTACGCAAATACGGTGAAACGTTACGCGTGTCCTAATGACAATTGCCCGAGTGTTTATAATTCACAGAgCGTGTTGCTGATGGATTTAGCGGAAATGTATCAAGTGCGTTACGTATGCAGGCAACGGAACTgcaacaaaacatttaaaaacgaGGCGTCACTTAACACGCATGTAAGAGACATTTGCAATCAACCGCCTCGATTTAAATGCGGGTATTGTCGTTACAGATCCCGTAAAATAACAGACATCAAGAGACACCTCATCAGATGTCACCCAGGTCTCGAGTCCAATATCGTTAAGCTCCATGAGTCTGCTGGTAAATCACGGCCGCGGAATCCCCCAGCTGTTGAAAAGCTAGACTTTTCTTGTGTGAATGCTAGTTGTTCACGTAAATTCAGAACAAAAAGTAACTTAATTTATCATGTTAATTACGAATGTGGTAAATTGCCGCGTTTCAAATGTAACTATTGTGATTTCAagcattatttcaaaagtgttATCAAGAAACACACACTAACCAAACATCCTGATCAAGAATACCGATTTGTTGTTACTGAGTCGTATTATCAATCTCTGATGTCTACTAACcagtaa
Protein Sequence: MNGHISKNHPDPAIERGEFLGILVDPSGISEVKRASKSPMEETSKYPCENCNSVFNRKTNLTFHMRWECGQPPRYKCPYYLMLPSSLLMLDYSNVDPEAFDHQQKFIVNKDKFQCSSCPRIFNSEYSVKRHVKECGIEPRYQCAYYLLVPMMRVSCPSYKKNKRHLTSGRYRCPNSDCRRFFNKHPSFVHHVKYRCGQPWRFECNECDYKTCWKHNLKKHIETKHLVKKEPAEILEMDADGKFRCINSNCTSAFSHERSLRGHLEICGKPPRYKCTYCDYQSRYISDVNRHTKTVHKDTCVKAVEQNEHLFKKKKYERLANGPFVCSYIIQYGGRAAGRDLQEEVYGCPNANCNRVFKWRSNLTKHINFECGKPPRFMCSKCYYRSPRKHDVMKHTTKQHPNETVTLVELYKPDKARGEFKCPNMNCGNYKNPMIIFPNANRSRGPIIENDPSCPIEIIEINNVCPNKNCGKVFQTRESFTKHVNNDCGKLPRFKCSSCDFYAWESGVVVRHANTQHLDQETLVVDQWNQYANTVKRYACPNDNCPSVYNSQSVLLMDLAEMYQVRYVCRQRNCNKTFKNEASLNTHVRDICNQPPRFKCGYCRYRSRKITDIKRHLIRCHPGLESNIVKLHESAGKSRPRNPPAVEKLDFSCVNASCSRKFRTKSNLIYHVNYECGKLPRFKCNYCDFKHYFKSVIKKHTLTKHPDQEYRFVVTESYYQSLMSTNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -