Basic Information

Insect: Microplitis deprimator
Gene Symbol: -
Assembly: GCA_964016945.1
Location: OZ024709.1:23394972-23397287[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.9 2.9e+02 3.2 0.5 1 20 255 274 255 278 0.88

2 10 0.0014 0.21 13.1 1.5 1 23 285 307 285 307 0.97

3 10 0.0006 0.09 14.2 4.0 1 20 313 332 313 335 0.95

4 10 0.018 2.7 9.6 5.4 1 23 341 363 341 363 0.98

5 10 6.7e-06 0.001 20.4 4.6 1 23 369 391 369 391 0.99

6 10 8.5e-07 0.00013 23.2 0.5 1 23 402 424 402 424 0.98

7 10 9.2e-08 1.4e-05 26.2 0.5 1 23 430 452 430 452 0.98

8 10 1.6e-06 0.00023 22.4 0.6 1 23 458 480 458 480 0.93

9 10 1.4e-05 0.002 19.4 0.1 1 20 486 505 486 508 0.94

10 10 4.9e-05 0.0073 17.6 0.9 3 23 516 536 514 536 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.9	2.9e+02	3.2	0.5	1	20	255	274	255	278	0.88
2	10	0.0014	0.21	13.1	1.5	1	23	285	307	285	307	0.97
3	10	0.0006	0.09	14.2	4.0	1	20	313	332	313	335	0.95
4	10	0.018	2.7	9.6	5.4	1	23	341	363	341	363	0.98
5	10	6.7e-06	0.001	20.4	4.6	1	23	369	391	369	391	0.99
6	10	8.5e-07	0.00013	23.2	0.5	1	23	402	424	402	424	0.98
7	10	9.2e-08	1.4e-05	26.2	0.5	1	23	430	452	430	452	0.98
8	10	1.6e-06	0.00023	22.4	0.6	1	23	458	480	458	480	0.93
9	10	1.4e-05	0.002	19.4	0.1	1	20	486	505	486	508	0.94
10	10	4.9e-05	0.0073	17.6	0.9	3	23	516	536	514	536	0.98

Sequence Information

Coding Sequence: ATGAGCAAGAGTGATATTTGTCGGGGGTGTATGAAAACAGGTGGATTTTTGCTGTCAATGTTTGATGCTGATGTTAACGATAAGAAATTACCAGATAAGCTGGCGGATATCGCTGATattgacatCAGTAAAAATGATGGCATGCCAACAACATTATGTCCAAAATGTGCTTATCGTACGGTATCATTTTATGACTTTAAAATACAAGTACAAAAGTCCGATAAAATTTTCCGGGAcatgttaaaaaaaaccgaTCCATCAggTTCGGATATAAGATTGATCGAGGAAGCAGCATCAATTGAGGtggcaaaaattaaaacaaataatgatGATGTAGATGTTAATTTGCTGGATGAAAAGCACTCAGATCCGCTATTCGCAGAATACGATCCTGAGAATTTAACATTAGACATTAAAAATGAACCGATAACGGCAATCGATCCATCTCTGGACTACATGTTTCTGTCATACATAAATTACGAAGAAATAGACGAGAGTTTGGAGCTTAACCCCATGGCGATGCCCAATGATTTATTAAAGCAGGACCAAGTaggagataaaaataatgatgaggATAAAGAAGATGCAGATGAGGATCCGGATATTAACGCTGGCGCTTACGCGGTTAGAGAAATCGATACCAAAAGTTATGACAACGCTTCGGACTCTGACGGCTACAATTGCGGTAACAATTTACTGGGCAGCATTAATGACACAGTTGTTAGAATAAGAGACATCAAATGTCAGGACGGTACGATGCAGTATCAGTGCACCCTGTGCATGCATAATTACACAGATCTGTCCGAGATATTGATTCATACTGTCGACAACCATGTGCCCAGCAACGGTCCATTTTTCTGCGTCGTCTGCGAGAAGGACTGCGACAGCAACCGCGAGCTCCGGTCTCACATTAAAGTCCACACCGGGGCGAGTCCGTACATTTGTTTCATTTGCAGGAAAGGCTACACGACTAAGAGATATTTGAAGCGACACATGATTTGTCACACTGATTTTCCCCGTCACCGGTGCACTCGATGCGCAATGAGATTCAAAACCAAATGCGAATTAGAGGGTCATGTCAAAACTCACGGTAATAACACGAGTTACTCCTGCAGCCAGTGCACTAGAGTATTTAATCACAAAGCAAATTACAAACGTCATTTAATGACACATCTAGACCCACGTGGTTTATGTTTACCCAAGTACCCGTGTTACATATGCGGTAAACGTTTTCCCAACAACCGAACTGTCCAAACACACATGAGAGTTCACACGGGCGAGAAACCCTTCACTTGTGACATTTGCAACAGATCATTTTCACAACAAGGTAATCTTGTTAATCACATAAAACTTCATTTGAATCCGCGTAATTACAGATGTGAAATTtgcggtaaaaaatttaatcagaggTCTACGTTGCGCGATCACGCGGTTCTGCACACGGGAGAGAAACCTTATGTGTGCAATGTCTGCGGTATCGCATTCACATTCAGCGCGGCGTTGAGGAGACACATGTGGAGCCATGCTGATAACAAACCTTTTGGCTGTGATAAGTGCAACGCTAAATTCGTCGGGAGGTACGAGTTGAAGAGACACATGAAGAGTCATTGCGACAAACCAAAGTACAAacgtaagaaaaataatgatgatttaATTGTTGATGTAAATGTCAGTAGTGCTGTTGATGATGCCGGTGGTAGTGATGGTGTTATTAATGAGAATGATCATGAGAATGATAATGACAGTGAGTATGTTAAAAGTAAtgatcaaattattataattaactcGGATGATATATTAAATCACGTTACTGTGGGGGATGATATGTTTATTGAAGATGTTGATCTCGTTGGTCATGACAATCAAAATCAGATAAATCATGAGAACTCGGAGAAGGAAAATGTCGATGCGCTTTTTGAACTGATACATTACACTtga
Protein Sequence: MSKSDICRGCMKTGGFLLSMFDADVNDKKLPDKLADIADIDISKNDGMPTTLCPKCAYRTVSFYDFKIQVQKSDKIFRDMLKKTDPSGSDIRLIEEAASIEVAKIKTNNDDVDVNLLDEKHSDPLFAEYDPENLTLDIKNEPITAIDPSLDYMFLSYINYEEIDESLELNPMAMPNDLLKQDQVGDKNNDEDKEDADEDPDINAGAYAVREIDTKSYDNASDSDGYNCGNNLLGSINDTVVRIRDIKCQDGTMQYQCTLCMHNYTDLSEILIHTVDNHVPSNGPFFCVVCEKDCDSNRELRSHIKVHTGASPYICFICRKGYTTKRYLKRHMICHTDFPRHRCTRCAMRFKTKCELEGHVKTHGNNTSYSCSQCTRVFNHKANYKRHLMTHLDPRGLCLPKYPCYICGKRFPNNRTVQTHMRVHTGEKPFTCDICNRSFSQQGNLVNHIKLHLNPRNYRCEICGKKFNQRSTLRDHAVLHTGEKPYVCNVCGIAFTFSAALRRHMWSHADNKPFGCDKCNAKFVGRYELKRHMKSHCDKPKYKRKKNNDDLIVDVNVSSAVDDAGGSDGVINENDHENDNDSEYVKSNDQIIIINSDDILNHVTVGDDMFIEDVDLVGHDNQNQINHENSEKENVDALFELIHYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01006507; iTF_01005484; iTF_01003744;
90% Identity: iTF_01003744;
80% Identity: -