Basic Information

Insect: Microplitis deprimator
Gene Symbol: br
Assembly: GCA_964016945.1
Location: OZ024710.1:20585612-20589914[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0048 0.72 11.4 4.2 1 23 391 413 391 413 0.98

2 8 1.8e-05 0.0027 19.0 1.7 1 23 419 441 419 441 0.98

3 8 6.7e-07 0.0001 23.5 0.2 2 23 450 471 450 471 0.98

4 8 1.3e-06 0.00019 22.6 0.3 1 23 477 499 477 499 0.98

5 8 1.4e-07 2e-05 25.7 3.2 1 23 505 527 505 527 0.97

6 8 3.7e-07 5.6e-05 24.3 2.1 1 23 533 555 533 555 0.98

7 8 9.4e-06 0.0014 19.9 6.4 1 23 561 583 561 583 0.98

8 8 3.2e-05 0.0047 18.2 1.1 1 21 589 609 589 610 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0048	0.72	11.4	4.2	1	23	391	413	391	413	0.98
2	8	1.8e-05	0.0027	19.0	1.7	1	23	419	441	419	441	0.98
3	8	6.7e-07	0.0001	23.5	0.2	2	23	450	471	450	471	0.98
4	8	1.3e-06	0.00019	22.6	0.3	1	23	477	499	477	499	0.98
5	8	1.4e-07	2e-05	25.7	3.2	1	23	505	527	505	527	0.97
6	8	3.7e-07	5.6e-05	24.3	2.1	1	23	533	555	533	555	0.98
7	8	9.4e-06	0.0014	19.9	6.4	1	23	561	583	561	583	0.98
8	8	3.2e-05	0.0047	18.2	1.1	1	21	589	609	589	610	0.94

Sequence Information

Coding Sequence: atggagATGAGGGAAGTTAACATCAATGTGTCGGGTGGAGTGAAGGATTTATTGAGGGATGCGTTGGTGTCTCAGACATTTGCTGATGTTTCGTTGTGTTGTTCtggtggaaaaaaatttctagcaCATCGGCTAGTGTTGTCTGCTGCTAGTCCGTATCTTCATGAAGTACTTTCAGCTCATGGAAAAATAGCAGGTCAATGTGAACCTATTACGATGATATTAGCCGAGGTCGAGGGCAACGATCTAGCAGCAATCTTAGGATTTCTCTATACTGGAAGTGTCGCGGTGCCTCAGGCAAGATTAGAAGCTTTCTCAAGTACTGCGGATGCTCTTAAAATTAGAATACCTCCTTTGCCACATGCTTTGAAAGCTCAAACTTTAtctgatgtaaaaaataattcgtgCTATAAATCTTCAACTCATGAAGATGTAACACAAAATACTGAACAAgttggtttaaatttaaaaattataaataaaacaaattgttTACGCCGATTACTTATGTCATcaaataaagataatattttagaaaataataataatagtacatATAGTAAATTAAAGTCGTACGTAGCAAACCGTGTTATTGCTTCTCCATGGTGTCAATTTGTTCAGCCTTATCATTTACCAAAGATTCAACCAATtctcaaaaataatgaatcaTCTTCTCGTACTtgtAATAACATTCCATcgagttttttttcatctgaTGGATACGAGTCTTCGCACATTCACTACGAGCCAACAAGTTCTTTCAGCACCACCACGACGACAACTGTAGgcgttgaaaaattatttgttaccAGTGTTAATAGCTCGGAGGACACTGAAACTTATAACCCGCTTAAATTAGAGAGCACTATCAATATACAAGACCATAAATCTTACGTCAATGATAcaattgacaaaaaaactattcacgACGAgacgataaatttatcatcagcGGTTTTCATAACAGAGgacaataatcaattaaagtATCACGACGATAGGCTTGATAAAGTAtcgttaaatttattgaacggGCGGGTTAATCTTGATAAAGTTGATAAATCCAAGTCGGGTACCGTTACGATAAGTAatgacagtaataataatagtagtaatagaATATCAGCTTCAGCGGTAAGTGAAGTTATTTCTACAATAACTTCAGGagattttaaatgtaaaaattgtgaaaaaatatttgtctgcGAATCAACACTTAAGATCCATCGCAAAAGCCACTTCAAAGAAAAACCCTTTCGTTGCGTCGATTGCGGTAAAGAGTTTTCTCAACTACGAAATTACAAATACCACCGCAGTGTGCACGAAGGTACGGGAGAATTTGCGGCAACTTGTCCCGAGTGCGGTAAATCATTCAATGATCGTGGGTACTTGGGCTCACATATGAAGATCCATCTTAATAAAAAGGAGTATGCCTGTAATGACTGCGGTAAAAGTTTTAATCAGCGAGTTGCGTATAATATGCATGTCAGAATACACACAGGCGTTAAACCACATAATTGCGATCAGTGCGGCAAAGCTTTTTCCAGAAAAATGCTGCTGAAACAACACATGAGAACACACTCTGGAGAGCGACCTTATCAGTGTCACATTTGCAATAAAGCGTTTGCTGATAAGTCTAATATGACTCTCCATACGCGACTTCACTCCGGTTTAAAACCTTATCAGTGTGATATTTGTTCCAAGGCATTCACTAAAAAACATCATTTAAAAACTCACTTAAATTATCACACTGGAACTAAACCGTACGCTTGTCCTAATTgtaaattaactttttcaCAGAGCAGCAATATGAGGACtcactataaaaaatgtttgaataaTAGTACGAGTAGTATCagtgctagaaaaaaaaataacagtacagttattaagaaaaaaaattttaataaagacaTTGATGATTTTTCTAATGCTCTTACGCCTCCTCATTCAGATTTAGAGTATCAGACAATTATCCGTGATATTAGTTGA
Protein Sequence: MEMREVNINVSGGVKDLLRDALVSQTFADVSLCCSGGKKFLAHRLVLSAASPYLHEVLSAHGKIAGQCEPITMILAEVEGNDLAAILGFLYTGSVAVPQARLEAFSSTADALKIRIPPLPHALKAQTLSDVKNNSCYKSSTHEDVTQNTEQVGLNLKIINKTNCLRRLLMSSNKDNILENNNNSTYSKLKSYVANRVIASPWCQFVQPYHLPKIQPILKNNESSSRTCNNIPSSFFSSDGYESSHIHYEPTSSFSTTTTTTVGVEKLFVTSVNSSEDTETYNPLKLESTINIQDHKSYVNDTIDKKTIHDETINLSSAVFITEDNNQLKYHDDRLDKVSLNLLNGRVNLDKVDKSKSGTVTISNDSNNNSSNRISASAVSEVISTITSGDFKCKNCEKIFVCESTLKIHRKSHFKEKPFRCVDCGKEFSQLRNYKYHRSVHEGTGEFAATCPECGKSFNDRGYLGSHMKIHLNKKEYACNDCGKSFNQRVAYNMHVRIHTGVKPHNCDQCGKAFSRKMLLKQHMRTHSGERPYQCHICNKAFADKSNMTLHTRLHSGLKPYQCDICSKAFTKKHHLKTHLNYHTGTKPYACPNCKLTFSQSSNMRTHYKKCLNNSTSSISARKKNNSTVIKKKNFNKDIDDFSNALTPPHSDLEYQTIIRDIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01005412;
90% Identity: iTF_01005412;
80% Identity: iTF_01004474;