Basic Information

Gene Symbol
ncor1
Assembly
GCA_964016945.1
Location
OZ024713.1:13154200-13166542[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-10 4.9e-07 30.7 0.0 3 43 564 604 563 607 0.96

Sequence Information

Coding Sequence
ATGCTAGCATTACGTGCGAGTTGGCCTACCCAAAATTACATAAACATCAAGAGCAGCAGTCCAGTGTCACCCCGAACAGTAGGCGTTGGTGGTTACGGAGGCCAGGGTACTACAAATACGCCGTCGTCTGGAGTGACTGTGGGTCCACCGGGTAGCGGAAGTGTTTCTGGTGTAACAGGAGTAGTTACCGGTTCTGCCGGCAGTAATTACGTCACCGTGCCAGTGCCCAATACACTTCGATATGTCCACCCTTatccaccaccaccaccgccACCGGCACCGTCAGCTCCCGTCAATCAAACGCCACCTCCACCGGGAGCTGCGGCCTACACCAGAGATCCCTACAGAAATACGACACCCAACGTATCTGAGAGGGTGGCAATAAGCGTGAGCAGCAGTCCAGTGTCCCAGGTTGGGGTTGGGGGTGTCGGTGTCGGAGGGAATGAGTACGCCCTCAACAGTCGGGGTGATCGCCCACGAATATCTCTGCTTCCACCTGCCTCGGGGAATCCAACAACTCAGCTGACTCCTGGTCCCGAGTATATGATCAGTACGAGGAATAATAATCCACGGAATTTGATGCCCATGCAGCAATCAGCTGACCAGTACACCAACAAAGCTGTCGAAATGGCGTCGCTCCAAGATGCTCcaccttttaaaaaaatacgtctAGGACAGCCGCAGTCTCAGCTTTTGTGTCAGACTATTCCATCAGCTGAAACTTGCATAAAACAAGATCATATTCAGCTTCCTCAGCCACTTAGGATAGATACTCGGCCTTCAGCAGGTGCGTATACTCCACAAACGGAAGCAATATCACCAACGTTACCAGAGCCAAGTAATCAAGAGGATGTTCAGTTTCGAAGTACCAAGGACGATTTGCTTCAGCAGATAGCTAAAGTTGATCGTGAAATAGCTAAGAGAGAAACTCAAATTTCGatgctgagaaaaaaattaaaagaactcGAAGAAGCTGCAAACAAACCCTTGGATACCAGTGGCCTCAAACGACCAGTTGAAGAACAGTTGCAACCAAAACATCAGTCACTGGCCCAAAAAATTTATGCTGAAAATAGgaaaaaggcGGAAGAGGCGCATCgactgttaaataaattaggaCCTGAAGTAACGCTGCCACTTTACAATCAGCCATCggatactaaaatttatcaggATAATAAAACGAAGCACCAATCATGTATGAAAGCGCGATTGGTCTTGAGGTTACGAAAAGAACACTGCGAGCGTGCAGTCCTTCAACGTCAGCAGTCACAGACTTATGCCGTTCTCGTTCAAGAGTGGCATCGCAAGATCGACAGAATAGAGggcacacagaaaaaaaaatcaagggACACTAAAAATCGTGAGTTTTTCGAAAAGGTATTTCCTGAACTGCGTAAGCAGAGAGAAGACAAAGAAAGGTTCAACAGGGTTGGCGCGCGTATTAAAAGCGAAGCCGATCTTGAAGAAATAATGGACGGTCTTCAGGAGCAAGAGGAAGAAGTATCAGCCGAGTTTAAAAATGCCATTATTGCCCGTCAGATGGAGGATAAAAAGATGCGTTCGTATGCAGTGATACCGCCGTTATTGTTGGACAAGCAGCAACGGAGAATAGCATTTCAAAATCGTAATGGGCTGCTTCAACCGGAAGAACTTGAAGCACTTCACAGTGAACGGAAGCTCATAAATGTATGGAGTCCTGAGGAACATGAGcttttcaaagaaaaatatcttcAACATCCTAAGAATTTTGGAATGATAGCTCAATCTCTTGAGCATAAATCTGTTGCTGACTGTGTGCATCATTACTACCTCACtaaaaaagctgaaaattataaacaattgttgcGTAAATCACGACAACGTACTCGTAGTTCGCGAAATAATCCTAACAATAAGGTTAACAATAGTAATTCTAGCATTGGAACAATAGATATATTAACGACAGGTGTAACGACAAGACTGCAGCGTGAGCAGCAACAGAAGACCCAAGAAAACCCACAAAATGCAGCGGCAACGTCGACGACAACCTCGACGACATCAACAACGACAACGACTACCTCTTCGAGTTCTTTGTCAACAAATACCACGACAAGTACATCATCTTCCACTACAACCGTCAGTTCGTCACTTCCAACAACAACGAGCTCTACTACCAGCACCACCAGCAGCAATACTGGCACCACCTCCTCGACGAGTGAGTCTCCCTCAATCGTCACAACTACCGTCACGTCCGTCCAGAGTTCTGCGACCTCGACAACAAGTGTACTGACGACCTCGTCGACGTCAAGCGCTAAAGATGCGAGAGAAGCtaacaaagaaaataacaaaaatgatACCAAGGATTCGATTGttaaggaaattaaaaaagaaatgaaagaAGAACTCGCTGATATTACAACCAAGGATTTGAAATTAacATCGGAAAACGCAAGTGGATTTTCCTCAGCTGGACCCAATGAAGTGTCAATGCAAACACCCGatgcaaaagaaaaaaagaaaactggaAGCACGACGACGAGTAATGTCAGTGGATCTGCTGGTAACCGATCTAAGGATaagaagaaagaaaataatcaCGCGACACCCATGGAAACCAGCGACGAGGAAGCGCAAAACATCGAGTCCATCGCCGGTGATGAAAATTCATAA
Protein Sequence
MLALRASWPTQNYINIKSSSPVSPRTVGVGGYGGQGTTNTPSSGVTVGPPGSGSVSGVTGVVTGSAGSNYVTVPVPNTLRYVHPYPPPPPPPAPSAPVNQTPPPPGAAAYTRDPYRNTTPNVSERVAISVSSSPVSQVGVGGVGVGGNEYALNSRGDRPRISLLPPASGNPTTQLTPGPEYMISTRNNNPRNLMPMQQSADQYTNKAVEMASLQDAPPFKKIRLGQPQSQLLCQTIPSAETCIKQDHIQLPQPLRIDTRPSAGAYTPQTEAISPTLPEPSNQEDVQFRSTKDDLLQQIAKVDREIAKRETQISMLRKKLKELEEAANKPLDTSGLKRPVEEQLQPKHQSLAQKIYAENRKKAEEAHRLLNKLGPEVTLPLYNQPSDTKIYQDNKTKHQSCMKARLVLRLRKEHCERAVLQRQQSQTYAVLVQEWHRKIDRIEGTQKKKSRDTKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEEVSAEFKNAIIARQMEDKKMRSYAVIPPLLLDKQQRRIAFQNRNGLLQPEELEALHSERKLINVWSPEEHELFKEKYLQHPKNFGMIAQSLEHKSVADCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNSNSSIGTIDILTTGVTTRLQREQQQKTQENPQNAAATSTTTSTTSTTTTTTSSSSLSTNTTTSTSSSTTTVSSSLPTTTSSTTSTTSSNTGTTSSTSESPSIVTTTVTSVQSSATSTTSVLTTSSTSSAKDAREANKENNKNDTKDSIVKEIKKEMKEELADITTKDLKLTSENASGFSSAGPNEVSMQTPDAKEKKKTGSTTTSNVSGSAGNRSKDKKKENNHATPMETSDEEAQNIESIAGDENS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01005022;
90% Identity
iTF_01006001; iTF_01005022;
80% Identity
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