Mdep010616.3
Basic Information
- Insect
- Microplitis deprimator
- Gene Symbol
- lola
- Assembly
- GCA_964016945.1
- Location
- OZ024708.1:23352326-23357487[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-16 1.9e-12 47.7 0.0 2 42 376 417 375 420 0.94
Sequence Information
- Coding Sequence
- ATGAGTATGCAACAGTTTTGTCTAAGATGGAATAATCATCAGCCAAACTTTATATCAGTGTTCTCAACTCTGTTAACAAATGAAACTTTGGTTGATGTGACACTAGCTGCTGAAGGCCGGCATTTACAAGCACACAAAGTGGTATTGTCAGCCTGCAGTACATACTTTCAATCATTGTTCACTGTTAATCCATGTCAGCATCCAATAGTTATATTGAAAGATgttaaattttctgaattaaaaataatggttGATTTTATGTATTACGGTGAAGTTAATGTATCACAAGAACAATTACCTTCAATTATTAAGACtgctgaaagtttaaaaataaaaggactTGCTGAAATGCATCCAGCGACGTTAACCAAGTGGCCAAGTGGTAGCAGTGACCCTAGCGGTGGAGATCGTGGTGAATCATGTTCACCAACTCCATCTCCAATGTCGCCTTCATTGAGGCGTAAGAGACTGAGAAAATCGTCAACTGGTTCGGCATCTGGATCTGGTGATAAACAAAATGAAGAAATGGGCGAAATAACACTTGTTGCTACAAATGTTGTTAAACCCGAGCCATTGATAGTGTCACAAGATAATCGTGATAATATAAGACGTCCAGTAAATACTAATACTGAATCACAAGGCAGTATTGACGAGGATCAAATATCTATTatgagTAATATGGAAAGTAGTACAACGACAACACTCGCTCAAAGTGAAGGCTCCGTGCACGATGTAAGTCATCAATCTGGGGCAAATGCAGGCCAAAGTTCATCACTCTCGTCTCAAGCACCAGCACATCAAgGATTGCAATGGACAATCATGGAGCATACGTATCCACGTTTCGCTCTATCCTCGTGTCAAACGAATCTGTCGATTCAAGCATCATCGGCGTTCACGACGCCCGAAATAACGGCGTCATCGAGCACCAACGATCAGTACCCGGGTACCAACACCACTGGTTCTAGCTGTGCTATGAACAGTTATCCAGGATCACCTCATGGACTCCAGCATACGTCATCATCAGGTGGTCTATCGCCCTCTGGTCAGTGTTCAAATAGCTGTCAAAGCCCTTGTGCCAGCCCACAAGCAACAGTTAAGCGAAAAAGATCAACAAATCCACAAgctgatgaaaattttatccgAGCTCTGGATGCAGTTCGCTACGGTGGGATAGGATTCTGTAAAGCTGCAAGAATGTTTGGCGTTAACAATCGAACACTTTGGcttgaatataaaaaacgtGGATATCCAAACAATCGACCAAGTGTTAaatcaaaagttaaaaatgaatCCAACTCATCGCCATCCTCTCCACCAGTACCACCACCTGTCGAACCACCAAGTCCATCTTCCATGGGTCCACCGACAACTCCTCTAAGTGCTCACAGTGCACACAGTGTTCACAGTGCCCACAGTGCCCACAGTACTCATAGTCCCCATAGCGCTCATAATATTCACAATACTCATGCTATGATACCCACCCATGCTCCCCACACGATGCTCGGCGGTTACGTTGACACTAGACACATTGATTACTCACTATCTAATCCAACTATGCCTATCAATTTACACGGTGTCAATTATAATGCCATCAAACAGGTTGAGGGAAAACGCAGTCGTTTGCTGCTAATGCGACAAACGAGAGTGAAAAAAGAATCAGAGCCAGGGCACCCGTCGCCAGACAGCGAGCCTGGTTCTCCTCGAGTGATTTCATCACCGCAATCTCACTCAGTTACTCCGATATTGAATCTTCCTTCGTCCTCGCAGCATTGGCAAGACAATGAACCGCCACAAGGAGCGACATCAAAACAAACTCTATTAACAGTAACAACTTGTACGAATTTGTTAACTGTACCACAGCCATCCTACTTAGTGAAGCAGCACTCTCATCCACTTTTGCCAAGTCAGCAGCAAAGTTCATCAAGTAATTACTGGATTCAACGACAGCACTCAAATCCCGAGTATCCTGGACGTTCTTCAAGTCCTTCCGGAGCCACAGATCCGATTCCACTTATTAAGATTGAGGAGGGACAGTCCGAGTCACGGATAACTAAAGATACCGGAAATAATTCAAGCTGTTTGAGAATCATATCTGCTGAATTACTCCGAAGTTCATCAACACCACAACTCGGTAGTGGAAGAGAAATAAGAACAATAAGAGAAGGAGGAGCAAGCGATCAGCGGTCGGGTCATTGCCCAGTTCAACGAGACGGACCAGCACTGGGATGTAATCATTGTTGGAATACCGTTGATACTCACGGTCGTACATTGAGGCGTAAAACAAAATACCATTGTCCAGAATGTCAAATAAACTTGTGCATTGTACCGTGTTTTCAAGAGTTTCATGAACGTCAGCGTGAAAATTCAACCATAAAAACATTACCAAAAACTAGCTCAATCTAa
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSTLLTNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSELKIMVDFMYYGEVNVSQEQLPSIIKTAESLKIKGLAEMHPATLTKWPSGSSDPSGGDRGESCSPTPSPMSPSLRRKRLRKSSTGSASGSGDKQNEEMGEITLVATNVVKPEPLIVSQDNRDNIRRPVNTNTESQGSIDEDQISIMSNMESSTTTTLAQSEGSVHDVSHQSGANAGQSSSLSSQAPAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEITASSSTNDQYPGTNTTGSSCAMNSYPGSPHGLQHTSSSGGLSPSGQCSNSCQSPCASPQATVKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSVKSKVKNESNSSPSSPPVPPPVEPPSPSSMGPPTTPLSAHSAHSVHSAHSAHSTHSPHSAHNIHNTHAMIPTHAPHTMLGGYVDTRHIDYSLSNPTMPINLHGVNYNAIKQVEGKRSRLLLMRQTRVKKESEPGHPSPDSEPGSPRVISSPQSHSVTPILNLPSSSQHWQDNEPPQGATSKQTLLTVTTCTNLLTVPQPSYLVKQHSHPLLPSQQQSSSSNYWIQRQHSNPEYPGRSSSPSGATDPIPLIKIEEGQSESRITKDTGNNSSCLRIISAELLRSSSTPQLGSGREIRTIREGGASDQRSGHCPVQRDGPALGCNHCWNTVDTHGRTLRRKTKYHCPECQINLCIVPCFQEFHERQRENSTIKTLPKTSSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00380437;
- 90% Identity
- iTF_00380437;
- 80% Identity
- iTF_01004410;