Mdep031376.1
Basic Information
- Insect
- Microplitis deprimator
- Gene Symbol
- klhl21
- Assembly
- GCA_964016945.1
- Location
- OZ024716.1:13879303-13882015[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.5e-09 5.9e-06 26.9 0.0 3 40 208 245 206 250 0.87 2 4 2.1e-12 5.1e-09 36.7 0.0 2 43 257 298 256 300 0.86 3 4 0.05 1.2e+02 3.5 0.0 7 33 314 339 310 344 0.75 4 4 9.1e-14 2.2e-10 41.1 0.1 5 39 372 406 371 411 0.94
Sequence Information
- Coding Sequence
- ATGACTGAGATTGTTGGTGATACGGACAGTTATGCTCGACAGTACTGCGTTACTTGGACTAATTACAAGCATGATATCCCGTATGTGGTACGTCAATTATTGGAGAATGAATCGATGGTTGACGTGACGCTTTGTGTTGCTGGTGAACGGATCCAAGCTCACCGTCTTGTTCTCAGTGCTTTCAGTGGCCTACTCCGAGACGTGCTGAAAGATGCATATGATGATCAtccgacaataataataagcgACGTGTCCgctgaaataatgaaaataataattgagttTTGCTACACCGGCCAGCTGAGCACGCCATCAATAAACACAAAAAGTTTGCTGGATGCTGCTTATTTCTTACAAATCTCAGCACTTTCAGagTTTCCCAACATAGAAAACTCTATTTTGCTGAAAGAGGACGTAGAAGAAATGACGGAGTCTTTGGAAATGTCTAATGAAGCTGAGGACAGTAATTGGGAACCTGTGAATGATCTTGAGGATTTGGTAGAGGCTGGAGATGTCGTGGATACTGAAGACCCCGATGAAACTACTGAGGAAAATGATAAACAAGAAAAGAgcgggaaaaaaaaacgtaaacgTGAGTACGTTAAGAGAGATTACAATCCCGCGATGTTGGAAGCTGCGCTAAATGATGTAAGAAACGGGTTCTCTTTGATTGATGCcgctaataaaaataatgtgcCGAGATCGACACTTTACATGAGGTGCAAAACTTTGGGACTGCAATTAAACACTGCGAGACATGAGTATCCTCCTGAATGTTTGAAGGCTGCTATCAATGCTGTTATgaatgGCGCAAGTTTTCAAAGTGCATCTGATACATACAATATACCAAAAACTGTACTATGGAGACGGattcaaaaagaaaattatcagTCACTGAGATCTGACAATAAACGTTCTTATGATGCTGATAAAAGAGAAGCTGCTGTCAAAGCTTTAGCTAGAGGAGAAAATCTTACAAAAGTTGCTTTAgaatttcaaataCCGAAAACTACTTTGTTTCGTGACAAAACAAAATTAGTGGACCAAGGAAAATTACCCGAATCATTTTGGAAAAAACGTAAGACTGAAGACgagcagataaaaaaattacgtctTGATGAAGCTGTCGCCGCTTGTTTGCAAGGTAAAATGTCTCAGGCAGCAGCTTCGGTGGCTTATCACATCCCAAAGACGACTATCTGGCGACGGCTTCAGCGAGAGCAGAGAAAAGaggacaaaaattttattaccaagAGGCAAAATCGATCTGCTCAGCGGGTTGATAAAATTGAGACACACAAAAATTCCGAAATGACGTTGTGTGACGTCAATGTCTCATCCGAAATCCCAATCACGTACATCGATGAAAATAACGTCGCAGAAGAgtctgttattattttaactaaagAAGACGTTGAGAGCCTTAATTTTGACGATGGTCAAATTGTCGTCAGCTCGgaCCACGATCACGAGTACGTTCCTTGCACGATAAGCATCGAAAATACTTCGAGTTATTCAACAActgaaagttaa
- Protein Sequence
- MTEIVGDTDSYARQYCVTWTNYKHDIPYVVRQLLENESMVDVTLCVAGERIQAHRLVLSAFSGLLRDVLKDAYDDHPTIIISDVSAEIMKIIIEFCYTGQLSTPSINTKSLLDAAYFLQISALSEFPNIENSILLKEDVEEMTESLEMSNEAEDSNWEPVNDLEDLVEAGDVVDTEDPDETTEENDKQEKSGKKKRKREYVKRDYNPAMLEAALNDVRNGFSLIDAANKNNVPRSTLYMRCKTLGLQLNTARHEYPPECLKAAINAVMNGASFQSASDTYNIPKTVLWRRIQKENYQSLRSDNKRSYDADKREAAVKALARGENLTKVALEFQIPKTTLFRDKTKLVDQGKLPESFWKKRKTEDEQIKKLRLDEAVAACLQGKMSQAAASVAYHIPKTTIWRRLQREQRKEDKNFITKRQNRSAQRVDKIETHKNSEMTLCDVNVSSEIPITYIDENNVAEESVIILTKEDVESLNFDDGQIVVSSDHDHEYVPCTISIENTSSYSTTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01006378;
- 90% Identity
- iTF_01006378;
- 80% Identity
- iTF_01004454;