Basic Information

Insect: Microplitis demolitor
Gene Symbol: -
Assembly: GCA_000572035.2
Location: NW:1094495-1120402[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 8.5 6.1e+02 0.6 0.4 3 23 345 367 345 367 0.85

2 17 2.4 1.7e+02 2.3 1.3 2 23 431 451 430 451 0.93

3 17 0.47 34 4.5 6.0 1 23 483 506 483 506 0.97

4 17 0.00088 0.063 13.1 0.7 2 21 563 582 562 586 0.89

5 17 0.0037 0.26 11.2 0.1 2 23 601 623 600 623 0.93

6 17 0.49 35 4.5 0.4 1 23 639 663 639 663 0.92

7 17 0.018 1.3 9.0 0.4 3 23 683 704 682 704 0.94

8 17 0.13 9.6 6.3 0.2 1 21 709 729 709 730 0.93

9 17 8.1 5.8e+02 0.7 0.2 2 23 752 773 752 773 0.90

10 17 0.0022 0.16 11.9 1.5 1 23 793 814 793 814 0.97

11 17 0.00023 0.017 14.9 1.6 1 23 820 843 820 843 0.91

12 17 3.3e-05 0.0023 17.6 3.6 1 23 861 883 861 883 0.97

13 17 0.015 1 9.3 0.0 1 23 888 913 888 913 0.92

14 17 0.005 0.36 10.8 6.0 1 23 922 944 922 944 0.97

15 17 0.078 5.6 7.0 5.4 3 23 953 975 951 975 0.92

16 17 0.00036 0.026 14.4 0.6 1 21 981 1001 981 1006 0.94

17 17 3 2.1e+02 2.0 1.5 1 23 1012 1041 1012 1041 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	8.5	6.1e+02	0.6	0.4	3	23	345	367	345	367	0.85
2	17	2.4	1.7e+02	2.3	1.3	2	23	431	451	430	451	0.93
3	17	0.47	34	4.5	6.0	1	23	483	506	483	506	0.97
4	17	0.00088	0.063	13.1	0.7	2	21	563	582	562	586	0.89
5	17	0.0037	0.26	11.2	0.1	2	23	601	623	600	623	0.93
6	17	0.49	35	4.5	0.4	1	23	639	663	639	663	0.92
7	17	0.018	1.3	9.0	0.4	3	23	683	704	682	704	0.94
8	17	0.13	9.6	6.3	0.2	1	21	709	729	709	730	0.93
9	17	8.1	5.8e+02	0.7	0.2	2	23	752	773	752	773	0.90
10	17	0.0022	0.16	11.9	1.5	1	23	793	814	793	814	0.97
11	17	0.00023	0.017	14.9	1.6	1	23	820	843	820	843	0.91
12	17	3.3e-05	0.0023	17.6	3.6	1	23	861	883	861	883	0.97
13	17	0.015	1	9.3	0.0	1	23	888	913	888	913	0.92
14	17	0.005	0.36	10.8	6.0	1	23	922	944	922	944	0.97
15	17	0.078	5.6	7.0	5.4	3	23	953	975	951	975	0.92
16	17	0.00036	0.026	14.4	0.6	1	21	981	1001	981	1006	0.94
17	17	3	2.1e+02	2.0	1.5	1	23	1012	1041	1012	1041	0.77

Sequence Information

Coding Sequence: atggaGACTGGCTATGAGGATGAGGACGACACACACTACTGCATTAAGTGTCACGTGACAATCACCGGACTGGACAATTATGTCCAGCATCGACAAACTGGTTGCCGACAATCTGAAAGAAAAACGATGACCCCCGAGCCACCCCCGGCGGCGGTCTGCTATCCGGAAATACTAAATGCTGACGCGTTTTTTAGCTCTCTGGAACTACAAAGCAGCGCTAAAACAAAGTCAAGTGGGAGCAGAGCCTTAGAGCCGGAAAAGAAATCAGAGAGATTAGGCGGAAAGCGTAAAAGGACAAAACGTTACCATGAAATTGACGAGCCGAGTGTTAAAGAGAAACTGATTGCTCTGTCACCAGTTGTTACGGATTTAGATGATCCCACTGATCACATCGGCATTCCTTCGCTCGTTGGATTTCCCGATTTGGTACCTTTTACCGACAAATCGACCACTTCAAAGCTGACACCAACGCTGACCAAGCCCGCCGATGagacagataaaaataaacgcaACGATGATCGTTGGTTAGATGACGACCTCGATGAAGATTCTGATACAAACAAAGATTCCGTTGATCAAAGTATCGACAGTGACTCAGACTATAATCGTCAGCAGCGACATTCCGATGACGATTCAGATGAAAGTCCAGCCGAGGATGTTGCCCAAGAGGATTCTTATTCGGAAACAGACGACCCAGACGACAGAGAATACCCACCGCAGCCTCACACCGGGGGAAAATGGAAGCCCGAGCAATTGCTCGAGCATATTGCGCCGGAAAATGAGGATGAAGTTGATCAAGATGACCCGGACCATCGGGACAGTCCAGTGCCACAGCCACACACCGGAGGAAAATGGAAACCCAGTGAGCAGAAAACGGAGGAGGAGGAACCAGCAGAGATGGACGAAAAGGAAGAGGAAGACAAGGAGAGCGTGATGACAAGGAACAGCAGACAACCACCGCCTGGTCACACTCGCGGGAAATGGATCCCGGGGGCTTCGGTTACGCCGTCGGAACTACGATCGGGTTATTGGTGCAGTCCTTGTGGTCGGAAACTCGCCTCTAAATTGGTTTACAGCAGACACTTGCGCTCGGACTTGCACGCTCGACGTAGCATTCAAGAAATTGAAGGCGACGTTAAATTGCCACGATCTGTTGGACCACTCTTACGCAGCAAATCTCGCACCAAACGTCAGAAAGTTATCGCACAAaaaCGCAGCACAGAGAACAAGAAAGCGGTTGATGATAATAAGTCTGGTAAAAAAACTCGGAatagagaaaaagaaattctGCGGTGCGAAATGTGTCACGCCCGTGTGCGTCGACTTCAACTGGGTAAACACCTGCTCTCCCACTACCACTGTCGTGTCGCAGGATTATACCCCTGCAGTCCTAAGGCGCAACGGTTTATCCTGGAGAACATGGGGAACGTGGTTCGCCAATGCCCATTTCGGTGTACGAGCTGTCGGTTTTATTGCAACACCCAGGAAACTTTCTTGCGTCACTGGCGCTCTACCCATGCAAATATGCCAAATGATGATGAAAAAAACTACACGTGTGTTTGCTGCAATTTCTGGTGCAATGGTGGAGCAGATATGGAACAACATCTGTTGAGTATAGAACACCGTGAGACAGTTTCTATGATCAATGGCTCAGTCCCGATTGTTATACGCCGGCAACTTATTTTATCGTGTGAAACTTGCAATCGTCGATTTCGCTACAACATCCAGCTCCAGCAGCACGCTAAAGAAACTGGACATCCTGAGAGCTCGACGGCAAAAGATGACTATCAACAGCGTGTACGTTGCGCCCTGTGTCCCCAAGTTCTGAGATCCCAGGTAGCTTTGCAACGTCATCAACTGGCTTCCCATAAGTCCTCAGACTTACCCAAGGCGGAAATACCCTCGATTGCGCCGTACTTCTGTTCCTTTTGCTCGATCAACTTCAAGGCTGCTCGAGACGCTATTTTACACCGTCGAACACCAAGTCACAAACAGACTGTCAAGGAGCACAAGTTTATGTCAGAAGGAGTTTTGCCATCCAAGGACTGCGGTCAATGCGGAGACAAATTCAATAACTTGACTGACTATAAGCGACATTTACTTCAAATCCATCCCGACTCTTGTCACAAaTGTTTGAGGTGCGGAGAGATTTTCGCTTTAGCCCAGGATATAACAAAGCACACGAAAGAAGGAGCGTGCGgaaaaataacagaaatattAGATAATGAATCACGGTGTGTAGATGAAGGACGTAAATGTTTGCAGTGTCCTTTCAGAACAAACTCCGAGGCAGAGTTAATATTTCATCAGGCTCTTCATGCAGGCACCGTCCAAGTTTACTCTGAAAAACCCGGGTCTAGTAAATCTCCCCAGACATACCGCTGTCCAGTCtgccaaaaaatatttccaaaattcTCTCTGCGCTATCACATTTTCCGACACACCAGAGAGAAACCCTATCGGTGCTCCAAGTGCACGGAGTCTTTTTCCCGAAAATCGGCTCTCACTTTCCACATAACCGAGTCCCATTCGCTCTCAGAGTCCAACGTAACCAACGAGACAACCCAACGTCAAAGGAATTTCATCTGCTTGCATTGCAACACCGGGTTCTATACCAAaaataatttaagacAACACATGCTTCGGCACGTCGGCAAAGAGTACAACTGCGAGTTTCCTGACTGTCCGACCGTCCTCAGAACGGAGACCGAGCTTAGAGCTCACCGAGCTCTGGTCCACAGTCCTAAATCCACCGAGCGCAAGTTCCACTGCAACGAATGCTCGTACTCGGCCAGGACCAAGGCCCAGCTTCgccgccATCACACCCGACACAGAGACCCAGAACCTCAGCTGTCATGTTCACACAAAGGTTGCAGATTCGTAACGCGACTGAAGTCGCATCTGAAGCGTCACCTGCGGCTGCATACAGGAGCCAAACCCTACAAGTGCCCGCACTGTCCATACGCGAGCAATAATATCgAAAATTTGAGGAAACACGTCCTGTCAACTCGACTgcatcccgggaaaaaaatttacgagtgTGAAAAATGCAAAATCAAGGGATGTAATATTTATgcgacaaatttttcaaaggaaCTACGGGCTCATTTAGTCACCGAACACTCTGAAGAATTTCCTACACCCGGAGAAGCCAACAGTTACGTTGCTGGAATGTTTGCCAGTGATGGACATCCGAAACAACCTgaataa
Protein Sequence: METGYEDEDDTHYCIKCHVTITGLDNYVQHRQTGCRQSERKTMTPEPPPAAVCYPEILNADAFFSSLELQSSAKTKSSGSRALEPEKKSERLGGKRKRTKRYHEIDEPSVKEKLIALSPVVTDLDDPTDHIGIPSLVGFPDLVPFTDKSTTSKLTPTLTKPADETDKNKRNDDRWLDDDLDEDSDTNKDSVDQSIDSDSDYNRQQRHSDDDSDESPAEDVAQEDSYSETDDPDDREYPPQPHTGGKWKPEQLLEHIAPENEDEVDQDDPDHRDSPVPQPHTGGKWKPSEQKTEEEEPAEMDEKEEEDKESVMTRNSRQPPPGHTRGKWIPGASVTPSELRSGYWCSPCGRKLASKLVYSRHLRSDLHARRSIQEIEGDVKLPRSVGPLLRSKSRTKRQKVIAQKRSTENKKAVDDNKSGKKTRNREKEILRCEMCHARVRRLQLGKHLLSHYHCRVAGLYPCSPKAQRFILENMGNVVRQCPFRCTSCRFYCNTQETFLRHWRSTHANMPNDDEKNYTCVCCNFWCNGGADMEQHLLSIEHRETVSMINGSVPIVIRRQLILSCETCNRRFRYNIQLQQHAKETGHPESSTAKDDYQQRVRCALCPQVLRSQVALQRHQLASHKSSDLPKAEIPSIAPYFCSFCSINFKAARDAILHRRTPSHKQTVKEHKFMSEGVLPSKDCGQCGDKFNNLTDYKRHLLQIHPDSCHKCLRCGEIFALAQDITKHTKEGACGKITEILDNESRCVDEGRKCLQCPFRTNSEAELIFHQALHAGTVQVYSEKPGSSKSPQTYRCPVCQKIFPKFSLRYHIFRHTREKPYRCSKCTESFSRKSALTFHITESHSLSESNVTNETTQRQRNFICLHCNTGFYTKNNLRQHMLRHVGKEYNCEFPDCPTVLRTETELRAHRALVHSPKSTERKFHCNECSYSARTKAQLRRHHTRHRDPEPQLSCSHKGCRFVTRLKSHLKRHLRLHTGAKPYKCPHCPYASNNIENLRKHVLSTRLHPGKKIYECEKCKIKGCNIYATNFSKELRAHLVTEHSEEFPTPGEANSYVAGMFASDGHPKQPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00379154;
90% Identity: iTF_01005615; iTF_01006647;
80% Identity: -