Basic Information

Insect: Microplitis demolitor
Gene Symbol: -
Assembly: GCA_000572035.2
Location: NW:999545-1003737[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.035 2.5 8.1 3.5 1 23 267 289 267 289 0.97

2 10 0.00012 0.0084 15.9 4.4 1 23 326 348 326 348 0.98

3 10 1.2e-06 8.4e-05 22.2 1.2 2 23 387 408 386 408 0.97

4 10 0.0011 0.081 12.8 1.8 1 21 413 433 413 436 0.89

5 10 1.3e-05 0.00096 18.8 1.1 1 23 468 490 468 490 0.98

6 10 4.9e-07 3.5e-05 23.4 1.0 1 23 500 522 500 522 0.96

7 10 1.3e-06 9.5e-05 22.0 1.2 1 23 528 550 528 550 0.99

8 10 6.7e-06 0.00048 19.8 0.2 1 23 556 578 556 578 0.98

9 10 8.5e-05 0.006 16.3 4.8 1 23 584 606 584 606 0.98

10 10 0.00025 0.018 14.9 0.3 1 21 612 632 612 633 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.035	2.5	8.1	3.5	1	23	267	289	267	289	0.97
2	10	0.00012	0.0084	15.9	4.4	1	23	326	348	326	348	0.98
3	10	1.2e-06	8.4e-05	22.2	1.2	2	23	387	408	386	408	0.97
4	10	0.0011	0.081	12.8	1.8	1	21	413	433	413	436	0.89
5	10	1.3e-05	0.00096	18.8	1.1	1	23	468	490	468	490	0.98
6	10	4.9e-07	3.5e-05	23.4	1.0	1	23	500	522	500	522	0.96
7	10	1.3e-06	9.5e-05	22.0	1.2	1	23	528	550	528	550	0.99
8	10	6.7e-06	0.00048	19.8	0.2	1	23	556	578	556	578	0.98
9	10	8.5e-05	0.006	16.3	4.8	1	23	584	606	584	606	0.98
10	10	0.00025	0.018	14.9	0.3	1	21	612	632	612	633	0.94

Sequence Information

Coding Sequence: ATGGAAATGTCAAGTGATTTAATGACAAATACAGCAACAAGtactgatgataattatttagagaCATTAACTGGAGATGAGTGTCGGTTATGTTTACAAAAATCTAAAGATTCATGGCCATTATTTCaatctaataataatcaattacctgaaaaaataatggcTTGTGCTGCAGTCCAgaTAATCAACGGAGACGGCCTGCCGTCAACAATCTGCAGCCCGTGCAATCGTCTCCTCGAAATctcttacaattttaaatgtgCCGTAGAAAAAACCGACGCAAAACTTCGAGCCACTTCTCACTACAAACCTCTAATAGTCTACACGGAATCTCTGACTCAAGTCTCAATGGAGCAAACCCCAGAGCAGAATCATCATTCCAAGGAGGAACGTGTCCTCATTACCGAGACACTCGCTGACTCTCATTTGCTTCAGCTGAATCCCGACAACACGATCATCTTCAGCGTGGACCAAGTCGACGAGTTGAAGCCCGGTCTAAAGAACAGTCTCAGTACCGACTCACAAGTAGTTTTATTAGAGAAGCTAGATGAGTTTGATGATCCCCTAGAAGTCAAAGTCCAGCGCAATTGCTCATTTACTGaagtttttgagctcaaagaAAATATTCTCCCTCCTGATACTGATACTGATCCTCATTCTGATGCTCATGTTGATCCTAATGTCGATTCTCATGCTGACAAACATGACAATGAATCAGTTGAAGTTGAAGATGCAAAAACTGATGATTCAAATGATACAAAATCATCGAAATTAACAACTAAgcatcaaaatttaatgtttatttgtcatatttgtagtgaacaatttaattgtgttgatgaattaaaaaaacatgttaCAACTCACGACTCATTAAAAAGTtctgatgataatttaataaataatgatcaaaatgtattgaatagtgatgaaaatattgaaaaaaaattagatactgataaaaaatcaatgaaatataaatgtaaatattgtaataaacaatttacatATGAAAAATCATATCAAACACATGCTAAATTACATGAAGAAACAAAAACATCATCATCACATTCACAAAATCAAACCCAAACTCAAAATTCATTCTCAGAAGATGATGATTTAACAGATGATTTAAATGATGATTTACCAGAAGGCTTACAGTGTTTACAATGCGGTAAATTATTTGCAACAAAACGTAATTTAAAACGACACATCAGTACCCATACTGGAGTTAAATTCAACTGCAGTACATGCAGAAAAGAATTTTCACGGTTggataaattaaaggaacatgAGTACGCGAAACACACGGCTGATTTTTCAGATACCGATGacaatgatgatgacgataaaACTGAGGGAATCAAAGAAGGAGCAAAAGAGATCAAGAAAAATCGACCACACAAGTGTTCTTTGTGCCCGAAGGCATTTGCTCAACTTCAGTCGCTCAACAATCATTTGGAAAGACACAAAAGGGTCAAGGATACGCAGAAAAGATTTTTGTGTGATGTCTGCAGCAAGTGTTTCGCTCAAAGCGGATCTTTGGTTGCTCATATGAGGACACATACGGGAGTCAAACCTTATGTGTGCAATGTTTGCTCTCGAGCGTTTACCAAAAGCACTTATTTGCAGTTACATCTTAGGACGCACAGTGGGGAGAAGCCTTATATTTGTCAGTACTGCAGCAGAGCTTTTGCAAGAGCTAATACCTTGGCAAGACATATCACGATGCATACGGGAGAAGCTAAATATCACTGTCAGATTTGCAGGAAAAGCTTCAGAAGATTGACTTCTCTTAATGAACACACGTATACGCACACGGGACAGCGACCTTATGCATGTAAAATTTGCACTAAGAGGTACAATAATGCGGGAAGTCTTTACGCGCATACGAAAAAGTGCAAAGCTCTAAATGGCGCCAAGGAAGAGGTTAAAGATGGTGGTGGGGATAAAGGAATTTATGGGAAAGATGGAATTTTTGTTATGGAACAGAGTAAAAATTTGGACAATTTTGGGGTTGACAATGAGAGTTTTCAAGAagataataaagaatttaaaggAAACTTTTATAATATCTATCCGAGTATGTAG
Protein Sequence: MEMSSDLMTNTATSTDDNYLETLTGDECRLCLQKSKDSWPLFQSNNNQLPEKIMACAAVQIINGDGLPSTICSPCNRLLEISYNFKCAVEKTDAKLRATSHYKPLIVYTESLTQVSMEQTPEQNHHSKEERVLITETLADSHLLQLNPDNTIIFSVDQVDELKPGLKNSLSTDSQVVLLEKLDEFDDPLEVKVQRNCSFTEVFELKENILPPDTDTDPHSDAHVDPNVDSHADKHDNESVEVEDAKTDDSNDTKSSKLTTKHQNLMFICHICSEQFNCVDELKKHVTTHDSLKSSDDNLINNDQNVLNSDENIEKKLDTDKKSMKYKCKYCNKQFTYEKSYQTHAKLHEETKTSSSHSQNQTQTQNSFSEDDDLTDDLNDDLPEGLQCLQCGKLFATKRNLKRHISTHTGVKFNCSTCRKEFSRLDKLKEHEYAKHTADFSDTDDNDDDDKTEGIKEGAKEIKKNRPHKCSLCPKAFAQLQSLNNHLERHKRVKDTQKRFLCDVCSKCFAQSGSLVAHMRTHTGVKPYVCNVCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCQICRKSFRRLTSLNEHTYTHTGQRPYACKICTKRYNNAGSLYAHTKKCKALNGAKEEVKDGGGDKGIYGKDGIFVMEQSKNLDNFGVDNESFQEDNKEFKGNFYNIYPSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01005480; iTF_01004536;
90% Identity: iTF_01005480;
80% Identity: -