Basic Information

Insect: Microplitis demolitor
Gene Symbol: -
Assembly: GCA_000572035.2
Location: NW:440821-445370[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0066 0.47 10.4 2.6 1 23 296 318 296 318 0.97

2 13 0.0017 0.12 12.2 0.7 1 22 323 344 323 347 0.91

3 13 1.7e-05 0.0012 18.5 0.1 1 23 451 474 451 474 0.96

4 13 1.1e-06 7.6e-05 22.3 0.2 1 23 480 502 480 502 0.98

5 13 0.0094 0.67 9.9 0.6 2 23 515 537 514 537 0.87

6 13 5e-07 3.6e-05 23.3 4.6 1 23 543 565 543 565 0.98

7 13 1.3e-06 9.3e-05 22.0 0.6 1 23 571 593 571 593 0.98

8 13 5.6e-05 0.004 16.9 4.4 1 23 599 621 599 621 0.98

9 13 2.6e-08 1.9e-06 27.4 2.0 1 23 627 649 627 649 0.99

10 13 3.9e-06 0.00028 20.5 3.3 1 23 655 677 655 677 0.99

11 13 0.00053 0.038 13.8 2.7 2 23 684 705 683 705 0.97

12 13 1.4e-07 1e-05 25.1 2.7 1 23 711 733 711 733 0.99

13 13 2.8e-08 2e-06 27.3 4.2 1 23 739 761 739 761 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0066	0.47	10.4	2.6	1	23	296	318	296	318	0.97
2	13	0.0017	0.12	12.2	0.7	1	22	323	344	323	347	0.91
3	13	1.7e-05	0.0012	18.5	0.1	1	23	451	474	451	474	0.96
4	13	1.1e-06	7.6e-05	22.3	0.2	1	23	480	502	480	502	0.98
5	13	0.0094	0.67	9.9	0.6	2	23	515	537	514	537	0.87
6	13	5e-07	3.6e-05	23.3	4.6	1	23	543	565	543	565	0.98
7	13	1.3e-06	9.3e-05	22.0	0.6	1	23	571	593	571	593	0.98
8	13	5.6e-05	0.004	16.9	4.4	1	23	599	621	599	621	0.98
9	13	2.6e-08	1.9e-06	27.4	2.0	1	23	627	649	627	649	0.99
10	13	3.9e-06	0.00028	20.5	3.3	1	23	655	677	655	677	0.99
11	13	0.00053	0.038	13.8	2.7	2	23	684	705	683	705	0.97
12	13	1.4e-07	1e-05	25.1	2.7	1	23	711	733	711	733	0.99
13	13	2.8e-08	2e-06	27.3	4.2	1	23	739	761	739	761	0.99

Sequence Information

Coding Sequence: ATGGACGATATATTACTGTATGATTCGACGATTTGTCGTTTGTGTGCTGAAAATAATACCAATGGAGTTAATTTGTTCACAGACAATAGCGAATATCCTGATTTGAGCTCACTTATCAACCGTTATTTACCTTTGAAGgtaagAAACGATGGAAAATTACCAACGACCATTTGTCCAGGTTGTAACATACAACTGGAATCCACGATGcagttttttgatttattggtTGAagggcaaaaaaaattacgagatttattgaaacaagaaaatgaattattaaaaaaaaatgatagattGAAAATGAGTCAGGGTGATAATCAGTTGGAGCAATTGAATCCTGATACGATGGAGCTGGTTAACtacgaacaaaaaaatgatgaaaattatggGCAgcaaattatcatcaatatattaccGGACGGCTCAATGTATGCAGCGGAGCATGATATGAGTTTACAAATGGAAGGTTTAGAAAAACCGCGACGAAAGCGCGGTCGCCCGCCGAAAAACCACACGGAAGATTTAAAAGACGAGGAAGTTTTGGAAACGAGTCAAGAAGACGAAGACAAACAGGATGACGATGATGAATTGGACGGTGACGGTCGACGGAGACGCAAGCGCAAGATTCCTAAACGTTTCTCTGAAGTAGTTCGAGGAAAAGAGTTGGAGAGAATGTTTAAGGAAGAAGGAGTCATTGATGACGAAGACGACACCGGGGAACGTGAGCTAGATGACAAAGGAGACAAGCACATGCCGCTTCCAGACGGCAACGAAGAGGTGATAGGACACCTGGAGTCCCAAGACGGCGAAGATCTCGGCGAGCTGATCATCATGAATCGTGGCCGCGGTCGTGGGCGACCGAAGTCGCGCCACAAAAAAGCTAAATACGTCTGCAATACCTGCGGTCGCGGATTCCAGCAGCGTCACCGCTACATAATCCACAAGAGCAGTCACTTGAACGATAAATTCGAGTGTCTTAAGTGCAACAAACAGTTTACGATActggataattttattttgcatcaAAAGAATGAAGGCCATTCtggtaaaaaagttattaaaaataattgtaccaACGTCGAATTCTTACAGGATTTAACGGATATGATTGACGATAATGACATCAACGACTCAACTGATGCGCTGGAGTCCCTAGATGATAAGCAGGATTCAAAAGTACAAACTCTAAATGAAGATATTAATGGAGATAAtgttaatgatgataatgataatgataattataatgacaatgataatagtaatgttaatggtactggtactggtgatgatgatgatgaagttgatggtgatgacgatgatgagtTCAAAGAGAATTCCGAGATAAAAGAGTACGTGTGCGATGACTGCGAAGAGCTCTTTACAACCCAGGACACTTTAGAAGCTCACATAAAAGAATTTCATAATGTGGACAATCCGTTCGTGTGCAACGTGTGCGAAAAAACTTTTGCGACTGAAGAAAACCTAAAAGTCCACGTCTCGACGCACGacattaccataaaaaaaaaaacgaacaaaGCGTGCGTGTGTGATATCTGCGGCAAGGTATTGAATCATCCTAGCTCGGTGGTCTATCACAAAGAAGCTGAGCACAATAACGGCCGTAAGTTTGTTTGCAACAAATGCGGTAAGAATTTCAAACACAAGCAACTGCTCCAGCGGCACCAGCTCACCCACTCGCAGGCACGGCCGTATGTTTGCAAATTGTGTGAAGCGAGTTTCAAAACCAAAGCAAATTTGATAAATCATCAGTCGACGCACACCGGGGAGAAAAAGTATCGCTGCAATCAGTGCAATCGTCAGTTTGCTCACAAAACGAGTTTGACTTTGCACTACCGCTGGCACAATGGAGAGAAACCTTACAGGTGTAATATTTGCCACAAAGATTTTTCACAGAATGGTAATTTGCAGGAACACATGCGTATACACACTGGAGTAAAGCCGTACGAGTGTGAGGTATGCACGCGTAAATTTACGACGTCCTCGCAGTTCAAGTTGCACCAAAAACGACACACTGGTGAGCGACCCTGGAAGTGTGAGTACTGCGGTAAAACATATTTGCATAAAGATACCTGGAAAACTCATGTACGCAGGCACAACGATGATCGTCCGTTTCAGTGTACACATTGCCCCCAATCATTCACTGAACAATGGGCATTGAAAAAACACATGCGCACACATACCGGCGAAAAACCTTACCAGTGTAATATTTGCGATAAACGTTTCGCTGATTGTTCAAATCTGACAAAACACAGACGCACTCATAGAGagcataaaattatgaatatcaaTGATATTAAAGCCGGGGTGTCTGGAGTTATCGCAACTCCCGCTGGAGCTGATGGAACCACTGGCGTTGTAGCTGGCGCGGGACCTGGAGAATTGTGGCAGATATTCCCGAGCCAGGAAGCTGATGATTCGCTTGAACTCCAGCGAGTCATCACGGACGAGGGATCTGAAGAGGGTACGCAAGTTATTTATGTGTCTTACCAGGATCCAAATGACCCGAGTCAATCGAGAACGCTGCACTTTGGCATGATCGAGGACAAGGAGGCCGCTGACGCTCAAGTGCTCCCTACGCTCAATGTCGAGGAACAGATTATCAGTAAGCCTGACGATGCGCAGGTAGAGATTGATCTGTCTGATCAGAATCTCCAGCTGCAGATAACTGACAGCGCTGGGAATCCCATTCCCCTGTCGATACAAGACGCGAGACAGCTGCTGGCTCGCGGTGAGTTCGTCAGTCAGTTAAACGACGGGCAGACTATCCGCGTGCACTCGGGTGTCGTCGCTGACGAACTCGCTGAGCAACTGGGAGTTCATATGCAACAGCCAATGGCTACCGATGATAACCAACAAGCAATTGCTCTTGATGACAACAGTGCTCTGGTGAAAGTCCTCGAGGATGATCCTGCTGATCAGATCGACGACCCAGCAGACTCCGCGCCCGCCTTTGAACTTATAAATGAAGACGGCAACAAAGTGAGACTCGTTCACTCGTATTATGCCTCGGTGTTGGCTAATCCTGTCGACGAGTACGTTTCCATCGGCTAG
Protein Sequence: MDDILLYDSTICRLCAENNTNGVNLFTDNSEYPDLSSLINRYLPLKVRNDGKLPTTICPGCNIQLESTMQFFDLLVEGQKKLRDLLKQENELLKKNDRLKMSQGDNQLEQLNPDTMELVNYEQKNDENYGQQIIINILPDGSMYAAEHDMSLQMEGLEKPRRKRGRPPKNHTEDLKDEEVLETSQEDEDKQDDDDELDGDGRRRRKRKIPKRFSEVVRGKELERMFKEEGVIDDEDDTGERELDDKGDKHMPLPDGNEEVIGHLESQDGEDLGELIIMNRGRGRGRPKSRHKKAKYVCNTCGRGFQQRHRYIIHKSSHLNDKFECLKCNKQFTILDNFILHQKNEGHSGKKVIKNNCTNVEFLQDLTDMIDDNDINDSTDALESLDDKQDSKVQTLNEDINGDNVNDDNDNDNYNDNDNSNVNGTGTGDDDDEVDGDDDDEFKENSEIKEYVCDDCEELFTTQDTLEAHIKEFHNVDNPFVCNVCEKTFATEENLKVHVSTHDITIKKKTNKACVCDICGKVLNHPSSVVYHKEAEHNNGRKFVCNKCGKNFKHKQLLQRHQLTHSQARPYVCKLCEASFKTKANLINHQSTHTGEKKYRCNQCNRQFAHKTSLTLHYRWHNGEKPYRCNICHKDFSQNGNLQEHMRIHTGVKPYECEVCTRKFTTSSQFKLHQKRHTGERPWKCEYCGKTYLHKDTWKTHVRRHNDDRPFQCTHCPQSFTEQWALKKHMRTHTGEKPYQCNICDKRFADCSNLTKHRRTHREHKIMNINDIKAGVSGVIATPAGADGTTGVVAGAGPGELWQIFPSQEADDSLELQRVITDEGSEEGTQVIYVSYQDPNDPSQSRTLHFGMIEDKEAADAQVLPTLNVEEQIISKPDDAQVEIDLSDQNLQLQITDSAGNPIPLSIQDARQLLARGEFVSQLNDGQTIRVHSGVVADELAEQLGVHMQQPMATDDNQQAIALDDNSALVKVLEDDPADQIDDPADSAPAFELINEDGNKVRLVHSYYASVLANPVDEYVSIG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01006482; iTF_01005458; iTF_01004517;
90% Identity: iTF_01004517;
80% Identity: -