Basic Information

Insect: Microplitis demolitor
Gene Symbol: SCRT1
Assembly: GCA_000572035.2
Location: NW:67757-105278[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00025 0.18 11.2 0.5 11 38 324 348 320 353 0.85

2 5 0.0043 3 7.3 1.0 17 28 361 372 350 387 0.75

3 5 0.037 26 4.3 0.3 18 28 388 398 378 409 0.83

4 5 0.00026 0.19 11.2 0.3 19 41 417 436 405 438 0.88

5 5 0.12 87 2.6 4.6 2 35 429 467 428 469 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00025	0.18	11.2	0.5	11	38	324	348	320	353	0.85
2	5	0.0043	3	7.3	1.0	17	28	361	372	350	387	0.75
3	5	0.037	26	4.3	0.3	18	28	388	398	378	409	0.83
4	5	0.00026	0.19	11.2	0.3	19	41	417	436	405	438	0.88
5	5	0.12	87	2.6	4.6	2	35	429	467	428	469	0.78

Sequence Information

Coding Sequence: ATGCCACGTTGTCTTATGGCTAAAAAGTGGAAGGCCTATCCATGGCCAGACAGACAGGATGATAACGAGGATACGGAGAAATGTAATATTGAAACCGTCCAAGAAAAACGAAGGGTGGCTGTAGAAATGGAAGATGAAGAGATTGACGTGGTAGGTGATAGTACGAGTGAAGGCCACAGTATGAATCAGCAAACATGCTGGGGTCCGCATAGTCCTACTGCCGGTACAACTGCTCCGAGTCCACCGCCACTAAACGCTTCGGGAGCGCTCTACTATCATGGCTATAATCATGAACCATGGCTAAATCACGATGAACCACCAAAATATGCAACGTTACGATCAGCAGCAGAATTAGCTCGACCTTTATTGGATTCTTCATCAGAACATTACGATCATCAACAACAGTGCACTAGCTCTCTGCTACCGTTACAAAGTATACCGGGTGTGCCATCTCGTACAAAAAGTCTATCAATGTGCTTTACAAGTACAGGTACCGCGCTATCACTTccaccgaaaaaaaaagacatttacCGTCCGTATAGCCTGCAACCGAACGTGGAAGTTTTACGAAATTCTCCTGAGGAAGAACTCTCAGCTGCTCAAGCAATTTTAGATTTGAGTGCATCACCAGTAGCACCAAGTCATTCGGTATTTATACATACTTTATCACTGCCACCAGCATCTTCTAATTCATCAGCTACTGCAGTATCATCGTCTCCTGAACCATCGCCAATTCCAGTTTCCGTAGTAGTATCAGTTCCTTCACATAATATTTCCAATAAACAAGAACCTAGTCTAGAATCTCTTCCTCCTGATAGTGCTGAAACGTGTTCAAATAGCATTGTCAGCAGCAACAATGTAAGCAAGAGTAATAAAACGGTCGCTTATACATACGAAGCCTTTTTCGTATCAGATGGAAGATCTAAACGACGTCCCAACAGCACGGCAGTTCTAGAGGCAGAACCAGTACAAACTGAAAAACCAAAGTTTACCTGCACAGAATGTGGCAAACAGTATGCTACGTCGTCCAACCTCTCACGACATAAGCAAACACATCGAAGTCTTGATTCTCAGTCAgcgaaaaaatgtattcattgTGGCAAAGCTTATGTAAGCATGCCTGCCTTAGCAATGCATGTACTTACTCATAAGCTCACTCATAGTTGCGGTATTTGCGGTAAAATGTTCTCTAGACCTTGGTTGCTTCAGGGGCATCTTAGGAGCCATACCGGTGAAAAACCTTATGGATGTGCCCACTGTGGCAAAGCTTTTGCGGACAGATCAAATCTCCGTGCTCACATGCAGACTCACTCAGCAGATAAAAACTATGAATGTTCCAGATGTCATAAGACCTTTGCATTGAAATCATACTTAAATAAACACTCGGAGTCAGCTTGTTTAAGAGACGAAGAAATGCAACCATACACTCCAGAGCAAGCTCATAGCGATGGAGAACAGTCACCTCAACTAAATAGAGGCTTGTAG
Protein Sequence: MPRCLMAKKWKAYPWPDRQDDNEDTEKCNIETVQEKRRVAVEMEDEEIDVVGDSTSEGHSMNQQTCWGPHSPTAGTTAPSPPPLNASGALYYHGYNHEPWLNHDEPPKYATLRSAAELARPLLDSSSEHYDHQQQCTSSLLPLQSIPGVPSRTKSLSMCFTSTGTALSLPPKKKDIYRPYSLQPNVEVLRNSPEEELSAAQAILDLSASPVAPSHSVFIHTLSLPPASSNSSATAVSSSPEPSPIPVSVVVSVPSHNISNKQEPSLESLPPDSAETCSNSIVSSNNVSKSNKTVAYTYEAFFVSDGRSKRRPNSTAVLEAEPVQTEKPKFTCTECGKQYATSSNLSRHKQTHRSLDSQSAKKCIHCGKAYVSMPALAMHVLTHKLTHSCGICGKMFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSADKNYECSRCHKTFALKSYLNKHSESACLRDEEMQPYTPEQAHSDGEQSPQLNRGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01003779;
90% Identity: iTF_01004581;
80% Identity: iTF_01003779;