Mdem007566.1
Basic Information
- Insect
- Microplitis demolitor
- Gene Symbol
- -
- Assembly
- GCA_000572035.2
- Location
- NW:2182674-2183861[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00024 0.17 11.3 0.8 15 34 8 27 3 29 0.86 2 12 0.05 36 3.9 1.1 14 28 35 49 31 57 0.83 3 12 0.11 80 2.7 5.7 9 40 58 85 50 90 0.81 4 12 0.0038 2.7 7.5 4.0 3 30 80 107 78 121 0.75 5 12 1.3 9e+02 -0.6 5.0 12 39 134 158 127 161 0.76 6 12 0.014 10 5.6 3.4 1 39 152 186 152 190 0.81 7 12 0.09 63 3.1 5.6 13 38 191 213 181 217 0.69 8 12 0.00086 0.6 9.5 2.0 4 38 211 241 208 241 0.88 9 12 2e-05 0.014 14.7 1.9 12 43 269 297 264 298 0.87 10 12 1 7.1e+02 -0.3 0.4 14 26 300 312 298 314 0.78 11 12 0.11 81 2.7 1.2 16 29 330 343 320 354 0.80 12 12 5.2e-05 0.036 13.4 0.1 15 43 357 382 350 383 0.88
Sequence Information
- Coding Sequence
- ATGGGTATTCATACCGGTGAAAGTATTTACAAGTGTGAAATTTGTAAAAAGGAATTcactagaaaaaataatgtgaaaaGACAAATGGGTATTTATACCGGTGAAAATATCTACGAGTGTGAAATTTGTAAACGACAGCTTAccaaaaactatttaaaaattcacatgaAAATTCATACCGGCGAAAATATGCATGAGTGTCATATTTGTCGAAACAAATTCATTACAGCGAGTAATATGAAGTTCCACATGCGTATTCACACTCGCAAAATCTCATATGAGTGTGACATTTGTAATAAGAAATTCACCAGGAAAGAGCATCTGAAGTATCACGTGAGTATTCATAACTATGAAACCCTGCGTAAAACATATTTACCATGGCATATACTTACTCATCATACTGTAGAAAAATCGCATGAGTGCAGCTTTTGTCACGCAAGTTGTAAGAATCTATCTGTACTGAAAAATCACATGTATATTCACTCCGGTAAAAGATCATATAAATGTGATATTTgtcagaaaatatttatcaagaagGTTAATCTAAATAGTCACATACGTTATCATACCATCGGAAAACAATACAAATGTAAtatctgtgaaaaaaaatttttcgaatcatATCATTTGAAAACCCACATGCGTATTCATACAGACGATAAACCGTACGAGTGTAATATttgtcaagaaaaatttactacaaagCAGAATATGATGAAGCACAAGCTGTGTGTTCCTTCTTATAACATCGGCCAAACAAGTTTGAAGCTACAGTTGGCGGTAAAAAGTCAGAAGTGTATTtcttctgataaaaaaatgtatgaatgtaATATctgtgaaaaaaagtttaatcaaGAGAATAGTCTAACATTTCACATGTATACGCGccattacaagaaaaaaacgtATGAGTGTGAGATTTGTCGAGCAAGTTTTAAACTTCTGTTTGCACTGAATTGTCACTTGTTTCTTCACAACTACACAAACTTGTACAAATGTGATATCTGTCAAGAAGTATACACTATAAAGGATTGTTTAAGACAGCTTATGTGCACACATACCGGCGAAAAATTATACGAATGTATTGTTTGTCCAAAGGAATTCTCTCGATTGTCTGGTCTGAAACGTCACATCCAGGACATTCACGTTGACTACAATCGATATAAGAGTGACAATCTTATTAGttaa
- Protein Sequence
- MGIHTGESIYKCEICKKEFTRKNNVKRQMGIYTGENIYECEICKRQLTKNYLKIHMKIHTGENMHECHICRNKFITASNMKFHMRIHTRKISYECDICNKKFTRKEHLKYHVSIHNYETLRKTYLPWHILTHHTVEKSHECSFCHASCKNLSVLKNHMYIHSGKRSYKCDICQKIFIKKVNLNSHIRYHTIGKQYKCNICEKKFFESYHLKTHMRIHTDDKPYECNICQEKFTTKQNMMKHKLCVPSYNIGQTSLKLQLAVKSQKCISSDKKMYECNICEKKFNQENSLTFHMYTRHYKKKTYECEICRASFKLLFALNCHLFLHNYTNLYKCDICQEVYTIKDCLRQLMCTHTGEKLYECIVCPKEFSRLSGLKRHIQDIHVDYNRYKSDNLIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01003746;
- 90% Identity
- iTF_01003746;
- 80% Identity
- iTF_01003746;