Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_000572035.2
Location
NW:53639-62824[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 1 1.1e+04 -5.0 14.1 59 121 204 266 181 266 0.37
2 5 1.2e-100 1.3e-96 322.1 5.6 2 218 264 473 263 473 0.92
3 5 1 1.1e+04 -9.3 30.2 36 103 645 713 616 728 0.45
4 5 0.11 1.3e+03 -1.6 3.9 54 94 755 795 723 813 0.63
5 5 0.36 4.1e+03 -3.2 3.4 65 106 854 880 830 913 0.43

Sequence Information

Coding Sequence
atgGAAACAAGAAATATTATCGATGATTCGGTAACGAGGTGTAGAGTTGATGAATTCGAGTTAGAACCAGAGCCAGAGCTAGAGCCAGAGCTAGAACCAGAGCTAGAACCAGAGCTAGAACCAGAGCTAGAACCAGAGCTAGATCTAGAAACTGAGGCTGATGTGCATCAAGTttatgctgatgctgatactGATGCTGATGGATTGACGTGTAATGAAGCTCCACTGCTGACAAGACTTACAGCTACCGAAGAATCAGAAGCATTTACTGAAGAAGATTCTGCAGAAAGTTTGACACTAAATACGAGGACTGCTGGGGATGAAGTTAGATCAGATGGTAGTGATTCGGGATTAGGAAGTGAAATTCCTGGTGATACTGGTAATGCTCCAGCACCTGAAAGTGACTCAGAGACTTCTTTTCTTGACAGAATTCCTGATGATATTCTTGGAGATAAAGAAAAAgtaataaaTACACTTGAAAATTTGGTACCAAATGTCAATAGTGAATCACCATTGACATTATTACCATTACCGAATAATTGTACCCCTCAAAAGAGCAATCTTAAACGACATATGATTGACTGTATAGAGGGTGAACCAAGtgctaaaaaaagtaataacaataataatactaataatagtaataataataataataataataataataataataataataataataataataatagtaataataatactaataataataataatgataatgataataaaagtaataatgataataataataaagatgaaGAAAAACCGATTATAACAAAAAAGCGCAACATACACTTTGATGCCGTCactgtatattattttccaagAGCCCAAGGTTTTACTTGTGTACCATCCCAGGGAGGTAGTACATTGGGTATGAGTGCAACTCACACACACGCCGAAAGATTTTCATTGACAGAGCATGCAGCTGAACAGAGGAGACTTCATCGAGCACGATTAGCACAATTACGATCTGAAAGGGCGGCTAATTGTATCGCTGAAGCTGCCTCAAGTTCAGAAGATCCAAGTGATGATACTGATGAGGAACCAAGTGACACCGAGGATCTTGATATTGacagttattattttcttcaaccaGTACCAACCTGGCAAAGGCGAGCTTTATTACGTGCCGCTGGTGTACGTAGAATAGATGGTATTGAAAAAGACGATTGTCGTGATATTCGTGCCAGTAGAGAACACTGTGGCTGTGGCTGCAAAGGATATTGTGATCCTGAAAGTTGTCCTTGTTCACGTGCCAATGTTAAATGTCAGgttGATAGAGCAGGTTTTCCATGCGGTTGTTCACGTGATGGGTGTGCAAATAGTTCAGGACGGATAGAATTTAATCCCGTTCGCGTACGAACACACTTTATTCACACATTAATGCGTTTGGAGCTTGAGAAGAAACAACGtgaagaagaaataataacgacaacaacaataacaacaccagcaacaacaacattaACTTCTGAACGGAATTCAACTAcaaagtttgataaaaattgtcCAGATAATCATACATCAGAATCTTCTTTATCAGAACCCTGTATCAGTACCGGTTTTACAACTCTTCACTACGACAATCCCGGCACAGCAGTTATAACATCAGTATCGGCGACAGCATCAAcgtcaacatcaacatcaacaggAACATCAGCagtagtagcagtagcagcTGCAGCAGCAGCGGGCGTATTATCAGTACCATTGCACACATCACGTGAAGATAGTTTTGATTTGTATGCAATACGTGACGATTGTTATTCAAATGAAGAGACTGTTACTGATGACAGCATACGCAATAAACTCCATCCAGAATTCAATCAAGCTTTCCAAAGTTTTACCGGCCAATCTTTTCAACCAACTTACCAAGATTACTCAACTTATGAATCAATGCCATCGACATCAcgacatcatcatcatcatcatcatcatcatcatcatcaccatcatcatcaccatcaacatcaacaacatcatcatcatcacgaacaacaacaacaacaacaacaaccacaaatacaaatacatgatcaacaacaacaagaacaacaacagaagcagcagcagcaacaacaacaacaacaacaacaacaacaacaatttaCTCAACAATTTGatcaatcatttataaattataataattatcaaaattcatCAATAGATATATCAGGTTCATCATCAGTATCTATATCCGCTTCAACTTCAATGTCTTCAATATCTGGTATATCTGGTATATCGATACAAACAAattgtcatcatcatcatcatcaacaacagcagcagcaacagcaacaacaaatCTATTCAACAACATTTCCGCAGGATGATAACGCGCAACAGCAATacactaatttaaattcagtacAACAACCAATGCAGAGTGTTGTACAACAATTGGGAAAACTTGAACCATTTTCAGAACTACTAGCTGGACGTTATTCTTATTATGGTGATATTGAACCTCagccaataaataattatcatgttGCTAACATTATTAAAGATGGTAATAATCACCATAACCATCACCATCATAATGATAATCATGTCGATAATGGTGATGTCGATAATTTCGATACtgttaatgatgataatgatgatgataataaaaagaatgataatgataacgctaaaaattacgatgatggtaatgataaaatcaataatataattagtaaaaaaataacagacaATAATGACGATAGTGATGAAAATTTtggagaaataattaaaaaatcaatggtTGAAACAGTGTCTGCTTAa
Protein Sequence
METRNIIDDSVTRCRVDEFELEPEPELEPELEPELEPELEPELEPELDLETEADVHQVYADADTDADGLTCNEAPLLTRLTATEESEAFTEEDSAESLTLNTRTAGDEVRSDGSDSGLGSEIPGDTGNAPAPESDSETSFLDRIPDDILGDKEKVINTLENLVPNVNSESPLTLLPLPNNCTPQKSNLKRHMIDCIEGEPSAKKSNNNNNTNNSNNNNNNNNNNNNNNNNNNSNNNTNNNNNDNDNKSNNDNNNKDEEKPIITKKRNIHFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLTEHAAEQRRLHRARLAQLRSERAANCIAEAASSSEDPSDDTDEEPSDTEDLDIDSYYFLQPVPTWQRRALLRAAGVRRIDGIEKDDCRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCSRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEIITTTTITTPATTTLTSERNSTTKFDKNCPDNHTSESSLSEPCISTGFTTLHYDNPGTAVITSVSATASTSTSTSTGTSAVVAVAAAAAAGVLSVPLHTSREDSFDLYAIRDDCYSNEETVTDDSIRNKLHPEFNQAFQSFTGQSFQPTYQDYSTYESMPSTSRHHHHHHHHHHHHHHHHHQHQQHHHHHEQQQQQQQPQIQIHDQQQQEQQQKQQQQQQQQQQQQQQFTQQFDQSFINYNNYQNSSIDISGSSSVSISASTSMSSISGISGISIQTNCHHHHHQQQQQQQQQQIYSTTFPQDDNAQQQYTNLNSVQQPMQSVVQQLGKLEPFSELLAGRYSYYGDIEPQPINNYHVANIIKDGNNHHNHHHHNDNHVDNGDVDNFDTVNDDNDDDNKKNDNDNAKNYDDGNDKINNIISKKITDNNDDSDENFGEIIKKSMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-