Mdem001254.1
Basic Information
- Insect
- Microplitis demolitor
- Gene Symbol
- -
- Assembly
- GCA_000572035.2
- Location
- NW:1441109-1443828[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-10 2.5e-07 29.7 0.1 4 36 18 50 16 53 0.95
Sequence Information
- Coding Sequence
- atggtgcgcaattataaatcaaaaaatactcATATGTCATGGAATGAATTGGCTATGGCAAAAGCTATCGAAGCAGTTAACCAAGGAGAGATGGGATATCTTGCTGCTTCAAAAGCGTTTGGAGTACCAAAAACCACTCTGAGACGCCGatccaatttttataaattaaacaatgatATAGAGTTTGTATCATCGAAAGggCTACCCAGAAAGTTTACTCCAGTTTTTAGTCCTGTGCAAGAATCCGAACTTGTCagttatttaaaagatttagaAAGTCGATTATTTGGATTATCAAGCTTCGAGGTGAGAATCCTCGCTTATCAGCtcgctgaaaaaaatcaaattaaacaTCCATTTGTAAATGGAGTAGCTGGAGAAGATTGGCTGCAAGGATTTTTGAAACGTAACCCCACCTTATCGTTACGCAAACCTGAAAGCACATCAGCAGCACGGGCAGctggtttcaatcggattgtcattcaaaatttttttaacttactaAAACAGATTATGGAAAAATACAATCTACTTCCTCATCGTATTTTTAACGTAGATGAAACTGGCTGTAGTAGTGTCCCAAAAACTCACGGGAAAATCATTGTTGAGAAAGGAAAAAAACAAGTTGGAATTTTAACGTCAGCTGAGCGAGGTAAAAATGTGACAATGGAGCTTTGTGTTTCAGCTTCAGGACAATTTTTACCACCATTGTTCATTTTTCCTCGTAAGCGTATGAAACCCAACTTGTTGAATAATACAATCCCAGGAAGTTGGGGGCTTTGTCATTCCAGTGGCTGGATGCAACATGATCTCTTCTTGCAGTGGTTCCAATGGTTTGTTGACCAGGTTAAGCCAACTTCTGAAGATCCAGTGCTGCTGATTTTGGATGGGCATACGACACACACTAACAATTTAGATGTGATTGACTACGCTCGTGATCATCACGTTGTAATTCTTTGCTTGCCACCTCATTGCACTCACCGTTTACAACCATTGGATGTCAGTGTAATGAAACCAATATCTTCTTATTATGAgcaagaagtaaaaaaatggttATCAGAGCACCCAGGAAGAGTCGTCACGCCTGAAGTTCTGCCAATGCTGTTCAGTAATGCATTAAATAAAGCAGCAAAGCCTGAAACTATAATAAATGGTTTCCGAAAAACTGGAATTTACCCAATGAATCCAGATATTTTTGACTCAAAAGATTTTGCTCCTGCCGACACTACCAATAGCAACAAACCACCTGAAGAACAATCACTAGAAAATCTGACCCAAAGTCTGAGTGATTTGTGCAAGACAGATTTTATTGAAGGACCTGAACCCGAGCAACAACCTGAACAGCAGCAACTTGAGCAACAAGAGCTTAGACAGCAAGAGCCAGAAAAACCTGAACTGCAACAACAACTTGAAGAGCCAGTAATTATTCCAATTGCCTCCACCTCCACTGGTAAACCATCGTTGAGGCCCCCATCTAGGTACTTTAGACCACAAATTATTGACGAAAGCTCCGATGAAGAGATGGAAAAATCTCTTACTGAAAATATCACTAAAACTGCTGCATCATCCAAAGCAACGATGAGACAAAACACATCGAAGTTTTATGTAACACCTTACGACATCAAGCCATTGCCATCAAGAGACTCCCCGCCAAAAAAACGACGTCGAGGTGTGACGAGGATTTTAACCAGTAAACAATACCGTGATGagttggaagaaaaaaaaaataatcaaaaaataaaaaatataatagcagAAAAAGTCACTAATAAAAACAAAgctccaaaaattaaaaaaaaaaaaagttctcaaAAAGAAGACAGTGATTGCCATTGCCTGTATTGTAATGGACTCTATTCTGAATCAAAGGAATCATGGATTCAGTGCAATAACTGCAAAATGTGGTCTCACGATTCCTGTGCAAGTATTGAGGAAGATTTTTCAGATGAATATACCTGTGATtactgtgaaaataattaa
- Protein Sequence
- MVRNYKSKNTHMSWNELAMAKAIEAVNQGEMGYLAASKAFGVPKTTLRRRSNFYKLNNDIEFVSSKGLPRKFTPVFSPVQESELVSYLKDLESRLFGLSSFEVRILAYQLAEKNQIKHPFVNGVAGEDWLQGFLKRNPTLSLRKPESTSAARAAGFNRIVIQNFFNLLKQIMEKYNLLPHRIFNVDETGCSSVPKTHGKIIVEKGKKQVGILTSAERGKNVTMELCVSASGQFLPPLFIFPRKRMKPNLLNNTIPGSWGLCHSSGWMQHDLFLQWFQWFVDQVKPTSEDPVLLILDGHTTHTNNLDVIDYARDHHVVILCLPPHCTHRLQPLDVSVMKPISSYYEQEVKKWLSEHPGRVVTPEVLPMLFSNALNKAAKPETIINGFRKTGIYPMNPDIFDSKDFAPADTTNSNKPPEEQSLENLTQSLSDLCKTDFIEGPEPEQQPEQQQLEQQELRQQEPEKPELQQQLEEPVIIPIASTSTGKPSLRPPSRYFRPQIIDESSDEEMEKSLTENITKTAASSKATMRQNTSKFYVTPYDIKPLPSRDSPPKKRRRGVTRILTSKQYRDELEEKKNNQKIKNIIAEKVTNKNKAPKIKKKKSSQKEDSDCHCLYCNGLYSESKESWIQCNNCKMWSHDSCASIEEDFSDEYTCDYCENN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01003450; iTF_01003451; iTF_01003452;
- 90% Identity
- iTF_01003450; iTF_01003451; iTF_01003452;
- 80% Identity
- iTF_01003450; iTF_01003451; iTF_01003452;