Mdem007035.1
Basic Information
- Insect
- Microplitis demolitor
- Gene Symbol
- lolal
- Assembly
- GCA_000572035.2
- Location
- NW:304183-309041[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-12 1.9e-09 36.4 0.0 1 41 382 422 382 426 0.93
Sequence Information
- Coding Sequence
- ATGGGCACCTCGGAGCAGCATTACTGTCTAAGATGGAACAATCATCATGCAAACATGATAACGGTATTCCAAGAATTATATCAAAATGGAGCACTGACTGATGTAACCATTGGACTTTCGGATGGTTTACTGGTTGAATGTCACAAGCTGGTACTCGCTGCCTGTTCGTCGTATTTTcgtaaaatattacaaaatttgaaccgACCACGTGCATTGATACTCGTTAATGTTAAATACTATCAGATGAAAGCGATACTTGAGTATATGTACCATGGCGAAGTCAGTGTCACTACTGAAGAACTCCCGGCACTGCTTGAAATtgcgaattatttgaaaataaaagggCTGACTGATGTGCCAGAGTTTCCTGACTCATCTTCACGGTCATCTTCGCCGTGTGCGCAAACACGGCAGTCGCAAACGCAATCTCAGTCCCATTcgcaacaacagcagcaacaacaacaaccgCAACATCAAAACAGCCATCAGCAACGTCGTTCACGTCGTGACCAAGTCAGTCCGTCATCACCGTCACCAGCAATAACCACCAGTTGTATGAACTACTTGGCTGCTAATTCTGATAGTATTGGCAATGGAAATGGTAATAATAGAATTGGTGATCATACGTCACCGCCACATTCAACCAGTTCACCATACTACAACAATTATCGTAAATCACCAGCTCGTGCTCACAGCGAATCACGTTTTCCGACAGCGCCTGGGTGGAATTTACCGTTCGTTGGATCACACTTTGCGTCGTCTCTCCATCAAGGGTCATCGATGTCTGCCCACCATGCGTCTTTGCTTGCTGCTCACTACGAGAACGATCTAAATACCCGTAAGAACAAATTACCAAATTATATGATGGGTCGTGATACACCTATACTAAGAACTGTTCTTGGACAAGGTAACGCTGATAGTTCCCAAGGAGCCGTACCACTTATTCACGCTGACAATCAAGAGTACCGTAGTCCCAGCAATCACTCGGCCAATGATAACACGGACAGCAGACGCAACAGCATGAGTCTTTCGCAAGGACGGAGTCCCTATGACACTGTCGTCAAtgatagcgaaaaaaaattgtcaccacGCATGCGTTCGACCGCTGAACCAAATCGTGAATGGAAACGTTATAAGCAGTATACTAAAGAAGATATAGCCTCAGCTATTGAAGCTGTGAGAAATGGTATGAGTGCACTCCAAGCTTCGCGTCAATTTCACGTACCATCGCGTACGCTTTAcgataaagttaaaaaattaggtATCGCTAACACACGATCAATGCGCCGTAGTAGTAATCATAGCGGAGCCAGTTTTCCATATGGTATTGGTGGTAATGTTAACGGTAGTATTTATGCATCGATGTCTGACAATGACTATGATAATAAGACCGGTGTTTTCGAGAGCCCGAGTGCTATTATTGAACAAGCTTATGCCAAGAGTAGAGAAAATTCAAACGATCGTGATTCGGCAATGGAAATATCTCGAGTTACACCAACTCCAAGTCCTAGTCCGAATCGATCGATTCAAAGCGCTGGTCATAATCAGCAAGAAGTTGATATGGAAGATCAAGTTGAAGACTTGTCGATGAGTAGTAGAAAGTCTGATGTACGTGTAATAGTATCGCCTGTTATCAAAGAAGAAAAACCTGACCCAGATAATGTTCATCACAAatga
- Protein Sequence
- MGTSEQHYCLRWNNHHANMITVFQELYQNGALTDVTIGLSDGLLVECHKLVLAACSSYFRKILQNLNRPRALILVNVKYYQMKAILEYMYHGEVSVTTEELPALLEIANYLKIKGLTDVPEFPDSSSRSSSPCAQTRQSQTQSQSHSQQQQQQQQPQHQNSHQQRRSRRDQVSPSSPSPAITTSCMNYLAANSDSIGNGNGNNRIGDHTSPPHSTSSPYYNNYRKSPARAHSESRFPTAPGWNLPFVGSHFASSLHQGSSMSAHHASLLAAHYENDLNTRKNKLPNYMMGRDTPILRTVLGQGNADSSQGAVPLIHADNQEYRSPSNHSANDNTDSRRNSMSLSQGRSPYDTVVNDSEKKLSPRMRSTAEPNREWKRYKQYTKEDIASAIEAVRNGMSALQASRQFHVPSRTLYDKVKKLGIANTRSMRRSSNHSGASFPYGIGGNVNGSIYASMSDNDYDNKTGVFESPSAIIEQAYAKSRENSNDRDSAMEISRVTPTPSPSPNRSIQSAGHNQQEVDMEDQVEDLSMSSRKSDVRVIVSPVIKEEKPDPDNVHHK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01003672;
- 90% Identity
- iTF_01003672;
- 80% Identity
- iTF_01003672;