Mdem001463.1
Basic Information
- Insect
- Microplitis demolitor
- Gene Symbol
- bab1
- Assembly
- GCA_000572035.2
- Location
- NW:2732014-2978306[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-17 1.8e-14 52.5 0.0 1 43 402 445 402 447 0.95 2 2 5.2 4.9e+03 -3.3 1.8 6 15 521 530 519 532 0.88
Sequence Information
- Coding Sequence
- atgacGCAACAAAGTGGTGCTGGTTCGCCTCAGCAGTTTTGCCTGCGATGgaataattatcaaacaaATTTGACAAATGTCTTTGATCAATTGCTGCAAAGTGAGAGCTTCGTTGACGTGACACTAGCATGTGATGGACATTCCGTAAAAGCTCACAAAATGGTATTATCTGCTTGCAGTCCATATTTCCAagcattattttttgaaaatccatGTCATCATCCAATTGTTATTATGAAAGACATTAAGTGGCCGGAATTAAAAGCAGCTGttgaatttatgtataaagGAGAGATAAATGTATCGCAAGAACAAATAGGACCTTTGCTTAAAGTTGCCGAGTGTTTGAAAATACGTGGATTAGCGGATGTCAATAATGAACATGAATTGGTGTCCAAACCGATGCACAGTAGTCttcaacagcaacaacagcagcaacagcaacagcagcagcagcagcaacagcaagcGCTGCAACAGCAATTGCAATCGGAGCCGGCATTGTCACCGGCCAGTTCAATTcacaatcataatcataacAACCGTAAAAAACGACGCAGAGTATCAAGTGAACGATCACCAGCGAGTGTTAATGACAGTCCTGATCATCATAGTTTGTGTATGACTGAAGACAATGACCACTCGTCAGTAATGTCGGAAGTGCAAAATCTGGTGGCGTCATCGACACCTCGGTCATTGAGTTCGCCTAGTATGCCAAGTATTTCAGTGACACCGCAGATAAATTTACAAGATCTTCCAGTGTCACTGGCATTGCCACCGCCAGTATCGGTCAGCCAAAGCCCTCACCCTACAATATCCCACCACGTGCCAGTCCACGTGACACCCACTGGCCACCCGTCCGTCAACCACCTCGGTGCTCACCACGTGGCTCAGCTGTCGGTACACCAGCAACAGGCACAACAGGCCCATCAGCAAGCACATCAGCATCAACAGACACTTAGTAGTCAGTCTAATCTTATTGATGACCTCGAGATCAAACCTGGCATTGCTGAGATGATTCGCGAGGAGGAAAGGgcCAAGTTGTTGGAATCATCCCACGCTTGGCTCGGTGCCTCCACCTCCAATATATCAGCAGATAGCTATCAGTATCAACTGCAGTCACTGTGGCAAAAATGTTGGAACACAAATTCTGGATTGGTGCATAACTTGCGCTTTCGTGAACGTGGACCACTAAAATCATGGAGGCCGGAAACTATGGCTGAGGCGATTTTCAGTGTTTTGAAAGAAGGATTATCGTTAAGTCAAGCTGCtagaaaatacGATATTCCATATCCAACATTCGTTCTTTATGCAAATCGAGTGCATAATATGCTTGGGCCAAGTTCCGATGGTAGTGCTGATCTCCGACCGAAAGGAAGGGGACGACCTCAGAGGATTCTTTTGGGTGTATGGCCGGACGAGCATATCCGGGGTGTGATTAGAGCGGTGGTATTTCGCGACGGAAATATCGTGAAAGAGGAACCGACCCCGTTATATCCAAGTCTAGCGAATTATGCGTGCAATGGACCAGAGGGCGCGGTAAGCCCTAGTGCTGCTGCGGCCGCTGCGGTTGCCGCGGTCGCCCAAGGTCTCCGACACCAAATGTGCAGTATGGTAGCGGCGGCCCAATCCCACCCCCACGATATGGTAGCAACAAATCTCTCGGCAAACTTCCAAGCGGCTGTGCAAGTCAGTCAGCATCATATGAATAATAACAGCGGATCAAGTAACAATAACAGAAATTCCCCATTGATGCTCGGACTGCCAAGCCCTGGCTCGGGTGGACCACCAGAGAGTCCGATGGAAGGCAGCCCACTGGCGAGTCCCCTCGCGCCGCTAATGGACCCCGCACACATACCGAGTAGTGTTGAAGTCGGAATCGGTATCGGTGGACTAGGAGGTCTAAGTGGACTAGGTGCAATAAGTGGAATGCATTATAAGCCACAACGTAGTTACATAAGCCCACGACCTGATAATATCTTCCAAGAAGACATCGCCGACTTGGTTAAAAGTCAGCATGGACACAAAGACAAAGACAAAGTACCGGTAAAACTAGAACCGCTAACTGACTCTCGTAGTGAACAGTAa
- Protein Sequence
- MTQQSGAGSPQQFCLRWNNYQTNLTNVFDQLLQSESFVDVTLACDGHSVKAHKMVLSACSPYFQALFFENPCHHPIVIMKDIKWPELKAAVEFMYKGEINVSQEQIGPLLKVAECLKIRGLADVNNEHELVSKPMHSSLQQQQQQQQQQQQQQQQQALQQQLQSEPALSPASSIHNHNHNNRKKRRRVSSERSPASVNDSPDHHSLCMTEDNDHSSVMSEVQNLVASSTPRSLSSPSMPSISVTPQINLQDLPVSLALPPPVSVSQSPHPTISHHVPVHVTPTGHPSVNHLGAHHVAQLSVHQQQAQQAHQQAHQHQQTLSSQSNLIDDLEIKPGIAEMIREEERAKLLESSHAWLGASTSNISADSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGSADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGNIVKEEPTPLYPSLANYACNGPEGAVSPSAAAAAAVAAVAQGLRHQMCSMVAAAQSHPHDMVATNLSANFQAAVQVSQHHMNNNSGSSNNNRNSPLMLGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGIGGLGGLSGLGAISGMHYKPQRSYISPRPDNIFQEDIADLVKSQHGHKDKDKVPVKLEPLTDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00317550;
- 90% Identity
- iTF_01003636;
- 80% Identity
- iTF_01003636;