Mdem001531.1
Basic Information
- Insect
- Microplitis demolitor
- Gene Symbol
- klhl21
- Assembly
- GCA_000572035.2
- Location
- NW:128485-131083[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-09 1.9e-06 26.9 0.0 3 40 208 245 206 250 0.87 2 4 1.7e-12 1.6e-09 36.7 0.0 2 43 257 298 256 300 0.86 3 4 0.04 38 3.5 0.0 7 33 314 339 310 344 0.75 4 4 7.3e-14 6.8e-11 41.1 0.1 5 39 372 406 371 411 0.94
Sequence Information
- Coding Sequence
- ATGACTGAGATTGTTGGTGATACGGACGGTTATGCTCGACAGTACTGCGTTACTTGGACTAATTACAAGCATGATATCCCGTATGTGGTACGTCAATTATTGGAGAATGAATCGATGGTTGACGTGACGCTTTGTGTTGCTGGTGAACGGATCCAAGCTCACCGTCTTGTTCTCAGTGCCTTCAGTGGCCTACTCCgaGACGTGCTAAAAGATGCTTATGATGATCATccgacaataataataagcgACGTGTCTgctgaaataatgaaaataataattgaattttgcTACACCGGTCAGCTGAGCACGCCATCAATAAACACAAAAAGTTTGCTGGATGCTGCTTATTTCTTACAAATCTCAGCACTTTCagagTTTCCCAACATAGAAAACTCTATTTTGCTGAAAGAGGACGTAGAAGAAATGACAGAGTCTCTGGAAATGTCTAATGAAGCCGAGGACAACAATTGGGAACCTGATGATGGTCTTGAGAATATGGTAGAGGCTGGAGATGTCGTGGATACTGAAGACCCCGATGAAACTACTGAGAGTAATGATAAACAGGAAAAGAgcgggaaaaaaaaacgtaaacgTGAGTACGTTAAGAGAGATTACAATCCCGCGATGTTAGAAGCTGCGCTAAATGATGTGAGAAACGGGTTTTCTTTGATTGATGccgctaataaaaataatgtgcCGAGATCGACACTCTATATGAGGTGCAAAACTTTAGGACTGCAATTAAATACTGCGAGACATGAGTATCCTCCTGAATGTTTGAAGGCTGCTATCAATGCTGTTATgaacgGCGCAAGTTTTCAAAGTGCATCTGATACATACAATATACCAAAAACTGTACTATGGAGACGGATTCAAAAGGAAAATTATCAGTCACTGAGATCTGACAATAAACGTTCTTATGATGCTGATAAAAGGGAAGCTGCTGTTAAAGCTTTAGCTAGAGGAGAAAATCTTACAAAAGTTGCTTTAgaatttcaaataCCGAAAACTACTTTGTTTCGtgacaaaacaaaattagtGGACCAAGGAAAATTACCCGAATCATTTTGGAAAAAACGTAAGACTGAAGACgagcagataaaaaaattacgtctCGATGAAGCTGTCGCCGCTTGTTTGCAAGGTAAAATGTCTCAGGCAGCAGCTTCTGTGGCTTATCACATCCCAAAGACTACTATCTGGCGACGGCTTCAGCGAGAGCAGAGGAAAGAggacaaaaagtttattaccaAGAGACAAAATCGATCTGCTCAGCGGGTTGATAAAATTGAGACACACAAAAATTCCGAAATGACGTTGTGTGACGTCAATGTCTCATCCGAAATCCCAATCACGTACATCGACGAAAATAATGTTGCAGAAGAgtctgttattattttaactaaagaAGACGTTGAGAGCCTTAATCTTGACGACGGCCAAATTGTCGTCAGCTCGgacAACGATCACGAGTACGTTCCTTGCACGATAAGCATCGAAGATACTTCGAGTTATTCAACAactgaaagttaa
- Protein Sequence
- MTEIVGDTDGYARQYCVTWTNYKHDIPYVVRQLLENESMVDVTLCVAGERIQAHRLVLSAFSGLLRDVLKDAYDDHPTIIISDVSAEIMKIIIEFCYTGQLSTPSINTKSLLDAAYFLQISALSEFPNIENSILLKEDVEEMTESLEMSNEAEDNNWEPDDGLENMVEAGDVVDTEDPDETTESNDKQEKSGKKKRKREYVKRDYNPAMLEAALNDVRNGFSLIDAANKNNVPRSTLYMRCKTLGLQLNTARHEYPPECLKAAINAVMNGASFQSASDTYNIPKTVLWRRIQKENYQSLRSDNKRSYDADKREAAVKALARGENLTKVALEFQIPKTTLFRDKTKLVDQGKLPESFWKKRKTEDEQIKKLRLDEAVAACLQGKMSQAAASVAYHIPKTTIWRRLQREQRKEDKKFITKRQNRSAQRVDKIETHKNSEMTLCDVNVSSEIPITYIDENNVAEESVIILTKEDVESLNLDDGQIVVSSDNDHEYVPCTISIEDTSSYSTTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01006378;
- 90% Identity
- iTF_01006378;
- 80% Identity
- iTF_01003675;