Basic Information

Gene Symbol
Xbp1
Assembly
GCA_000572035.2
Location
NW:818041-820198[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.9e-13 3.5e-10 39.1 15.1 2 64 87 149 87 161 0.96
2 2 2.3 1.4e+03 -1.3 0.2 35 49 233 247 230 252 0.74

Sequence Information

Coding Sequence
ATGATTTCGCCAAAGAGTGTGATCATTACATTACCTCAGGGGCTCCAAAAATCACCAATGATTAGCCCAGTACGTAGTCTTATTAAACCaactggaaatttaaattttactacatcTATCTTAGCCACAAAAGCAAAAGTTGactctaaaaaaatgcaaaaaattcaacaagaTTATTATGGAGATGTACATGGTGAACCTATCAAATCAGATGTATGGATGAGAGGTAAAAAACGAAGACTTGACCATCTTACGTGGGAAGAAAAACTTCAAAGAAAgaaattaaaaaatagagttGCTGCACAAACATCTCGAGATCGTAAAAAAGCAAAGCTTGATGAATTAGAAGAAACAGTTAGAactttaatggaaaaaaatgaatttatcacAGAAGAATGTACAAGCCTAAGAGCTCAAAATAAAGCATTAATTGCGGAAAATCAAAGATTGAAAGAAGGAAAtaaaaacatcaataaaaCAGACGACCGTTATTGCTCAATGTGTTTAGGTCGTGTTGGTTGTGTTGCACCCGCGCTGGGATCAGCCGTATCCCCCATTAACCCTCTGCCGCAGGGTGGGGCAACTCAACTGGCACCGCCTAACACCATCAGCAAGTGCGGAGATACTGTTGAAGATATTGACGCTTTACCTCCTCTGGAGGAACTCTTTGCAGACATCCAAAGTGATGATTACATCGAGCGACTCGAAGAGCTTGCAGAAAGTCTTTTGCGAGAAGTTACCGCTGAAGTGGAAGCTCATTCTCAAAGACCAAATCAACaggTCACCATCAAGAAAGATACCTTTGAAGAATCtgatgatacaaaaaaaatggtggGGCAGACATCAAAAAATGTGGAAGCCAGTCCAATCTGTTCTAGCTTAAATCTTTATCCAAAAGAGTCAAGCTCCGctcaatacttaaaaaaatcatcaacacCATCAGAATTATTCAAACGTGAAGTTAAAGTTAAACAAGAACCAGTTGTTAACGATATGGACACAGTTTATGGAACGTACGATGAGGCTACAAACtgtattactattatttatccaGGAGAGGATGATAGTATTAGGATAGATGAATGTGTCCAGGAAATTAGCAGTGATGAATCAACTAATTTGACACCGACCTATTCGTATAACGATCATGTTTCACCTGCTTATTCAATGGCAGATTCTATGTCACCATCTAGCATTCATTCTGATGACTCTGAGATCAAATCagcatattataaatttaaatctaatatCTCAAATAGTGGATATGAGTCTCACGATTCACCACAAATTGAGAGAAATACTGGCACTACAGCACTTACAGATTTATGGCACGAAAGTTTTTCGGAATTATTTCCAAGTcttgtttaa
Protein Sequence
MISPKSVIITLPQGLQKSPMISPVRSLIKPTGNLNFTTSILATKAKVDSKKMQKIQQDYYGDVHGEPIKSDVWMRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRTLMEKNEFITEECTSLRAQNKALIAENQRLKEGNKNINKTDDRYCSMCLGRVGCVAPALGSAVSPINPLPQGGATQLAPPNTISKCGDTVEDIDALPPLEELFADIQSDDYIERLEELAESLLREVTAEVEAHSQRPNQQVTIKKDTFEESDDTKKMVGQTSKNVEASPICSSLNLYPKESSSAQYLKKSSTPSELFKREVKVKQEPVVNDMDTVYGTYDEATNCITIIYPGEDDSIRIDECVQEISSDESTNLTPTYSYNDHVSPAYSMADSMSPSSIHSDDSEIKSAYYKFKSNISNSGYESHDSPQIERNTGTTALTDLWHESFSELFPSLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01004826;
90% Identity
iTF_01004826;
80% Identity
-