Mmyr001054.1
Basic Information
- Insect
- Microdon myrmicae
- Gene Symbol
- stc
- Assembly
- GCA_963931805.1
- Location
- OZ007496.1:17833963-17860254[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.8 3.1e+04 -4.0 1.6 15 19 330 334 329 334 0.81 2 13 0.26 2.2e+03 -0.3 0.6 4 10 363 369 362 371 0.94 3 13 2.7e-05 0.22 12.4 20.1 3 19 376 392 365 392 0.85 4 13 2.2e-05 0.18 12.7 9.3 3 18 430 445 428 446 0.91 5 13 3.2 2.6e+04 -3.8 1.5 7 13 450 456 450 457 0.75 6 13 2.3e-07 0.0019 19.0 19.0 1 18 486 503 486 504 0.97 7 13 3.2e-05 0.26 12.2 15.2 4 18 550 564 543 565 0.86 8 13 0.078 6.4e+02 1.4 12.1 1 11 605 615 605 627 0.91 9 13 1.9e-09 1.5e-05 25.7 13.7 1 18 632 649 632 650 0.97 10 13 2.7 2.2e+04 -3.6 1.5 6 10 679 683 678 684 0.61 11 13 4 3.3e+04 -6.7 9.8 10 18 697 706 687 707 0.81 12 13 3e-05 0.25 12.3 15.7 1 16 743 758 733 769 0.82 13 13 2.6e-06 0.021 15.7 12.7 1 18 775 793 775 794 0.93
Sequence Information
- Coding Sequence
- ATGTCTGATATGTTCCATCGCAGAGGTGATGGAACAGAGAGAATCAATGGCAACGGCAACAACAACGACACCACTAACAACAACTATGTAGACTTCAATCAGTTCATGATGCAACACAACATCATTAGTGGCATCGGAAGCGACAGGATAATTGATGGGAACCCATTTCATTATAATGGTAATTACGGTCAGCAGTACCCGATCGGAAGCTATTATTTAGGTAATGGCGGAATGGATGCGTTTGGATACGGCGGCATGCCGATGTATGGCTACCAACCGCATATCAGTTGTATGAATTCCACACTGCAAGCAACGTCGCCAGAGTTTATCCCCAGCTTTGCGGGGTTATCATTGGAAGATGTTTTTATTGGCGAACCAGCTCCTCCGGCGCCCAGCACGATTTCTCCTAATGAAATAAGTAATTCACTTACGTATGGCACAGGCGGAAACGGTGATATTGGTGCTGGGGCAAACAACGAAATTCAGCAAGAAGCTCCCCCAGAACCACCGGCTGCAGTGGCACCAATTCCAAGATACACCGGTGCTACCAGCAAGAATCGTGATCCAGGATCCAGGAGCACGAACGGTGTGGCTGCGAACAACAGGAGGCAGAATGGACGTGACAGTCAACGAAACCAACGATACGATAATCACAGAAGCAACAAGCGCCGCGACGATTGGAACAGAAACCGTGATCGTTTGACTGCATTCACCGACGAGAAGATTACTTTGGATGATGGCAAAGACAGCGCCCAGAATTCGCCAGAGAAGAAATCTCCAAAAAAACTAAGTCTAGAGAACGAGAAGCTTTCACAAAGGGAGAAACTAATCCGAGAAATCGAATGTCGCCGCTTAGAGTGTTTGGTGTGTGTGGAGCCGATTAAAACCTACAATTCCGTTTGGTCCTGTCACAACTGTTATCACATTCTTCACCTCAACTGCATCATCAAGTGGGGGTCCAGTTCAAAGTCGCAGGAAGGATGGCGTTGCCCGGCTTGTCAAAATGTGGAAAAAGACGTTCCAAAAGATTATTATTGCTTCTGTGGAAAGGTGATGAATCCGCAGTACAATCGCAACGATGTCGCGCACAGTTGCGGACAGATTTGCGGCCGCATCGAGGGGTGCACACATTCATGTACTCTCCTCTGCCATCCAGGGCCATGTCCGCCATGCCAAGCAATTGTGAACAGAGAATGCGGCTGTGGGAAAACTACCAGCAGCGTCCAATGTTGCTTGAAGGATCACATTCAATGCACCAGTACGTGCCAGAAACCGTTGAACTGCGAGCTGCACCTTTGCGAAGACAAATGTCACGACGGCAAGTGCAAAGTTTGCGACAAGAAGGTTCAGCAGAATTGTCACTGCGGAAAACAGGAACGTCAGGTAGCTTGTACTAAAGATTCGCACGAAAAGAAGAACTATTCTTGTGGCAAACCATGCGGAAAGGACCTAAAGTGCGGTAATCACAAGTGTAAAGATTGTTGTCATTCTGGAGAGTGCCGCCCTTGTAATCTGAGCCCGGAAGTCGTGAAAACTTGCCCCTGTGGTAAAATACCAGTTGAAGACAGATCGTCCTGCCTCGACCCGATTCCTGTGTGTGATGGTATTTGCAACAAGACACTACGATGCGGGAAACCCGTCAACCCTCATCATTGCAAAAGCAAGTGCCATCTTGGCAACTGTCCGCCGTGCAACAAGCAGACTGCTGTGAAATGTCGATGCGGTCACATGGATCAGATGATCAAATGCCGCCAATTATCGACCAGAGCGGATGACGCCCGCTGCAAGAAACGTTGCGTAAGGAAACGCTCCTGTGGCAAACACAAATGTAATCAAGAGTGTTGCATCGACATCGATCACATATGTCCACTGCCCTGTAATTACACATTGTCCTGTGGAAAGCATAAATGCGATCAATCATGCCACCGCGGAAACTGTCAACCGTGCTACCGAAGTTCATTCGAGGAGCTGTACTGTGAGTGTGGCACCGAAGTAATTTATCCACCTGTACCGTGTGGTACCAAAAAACCACCGTGTAAGCGTCCATGTTCGCGTGCCCATCCTTGTGATCATCCTGTTCAGCATAACTGTCACTCAGCGGCATCTTGTCCGCCCTGTATGATATTCACGACGAAATGGTGCTTTGGTGGACACGAACAGCGAAAAACCATTCCATGCATTCAGGCCAGCTTTAGCTGTGGCCTTGCTTGCAACAAAGAATTGGCATGTAAAAGACACAAGTGCATAAAACCGTGTCATGAAGGACCCTGTCAGGTTCCCGGAGATGTTTGCAAGCAACCGTGCACAACCAGTAGACCGGGATGTGGGCATAAGTGCCTGGCACCTTGTCATGATGGCGCCTGTCCGGAGACATCTTGCAAGGAGATGGTGGAAGTAACATGCGATTGCGGCAACCGGAAGCAGATGAGAGCCTGCAGTGAATATGCCAGAGAATACAGACGCATCGCCACTGCCCTTTTAGCTTCGTCTATGGCTGAAGTTCAACGCGGTAATACCATCGAGCTAAGCGACATCATGGGTCCAATAAAGATCACCAGCTCAAACAAGGGACTGGACTGCAACGAGGAATGTCGTGTATTGGAGCGCAATCGGCGTTTGGCAGTTGGTCTACAAACCCACACCAACGAGCAGCAACCGAAGCAACTAACCAAATATTCCGAGTACATCCGAAAGAATGCCAAAAAGTATCCAACTCTGGTTCAATACATTCACGAGACCCTCACTAGTCTGGTGAAGTTGGCGAAGGAAAGCAAACAGAAGTCCCGCAGCCATTCCTTCCCCAGTATGAACCAGGAGAAGCGACGTTTGGTGCATGCGATGTGTGAAGTCTTTGGCGTCGACTCAGTTGCCTATGACGCCGAGCCCAACAGGAACGTTGTGGCCACGGCATACAAGGATAAATCATGGCTTCCGGCTCAGAGTATCATGGATGTGCTACAGCGAGAGAGCGGACAACGTCGGGTTCCTGTACCCAGCAACAATCCGACCGGCGGCAAAATCTAA
- Protein Sequence
- MSDMFHRRGDGTERINGNGNNNDTTNNNYVDFNQFMMQHNIISGIGSDRIIDGNPFHYNGNYGQQYPIGSYYLGNGGMDAFGYGGMPMYGYQPHISCMNSTLQATSPEFIPSFAGLSLEDVFIGEPAPPAPSTISPNEISNSLTYGTGGNGDIGAGANNEIQQEAPPEPPAAVAPIPRYTGATSKNRDPGSRSTNGVAANNRRQNGRDSQRNQRYDNHRSNKRRDDWNRNRDRLTAFTDEKITLDDGKDSAQNSPEKKSPKKLSLENEKLSQREKLIREIECRRLECLVCVEPIKTYNSVWSCHNCYHILHLNCIIKWGSSSKSQEGWRCPACQNVEKDVPKDYYCFCGKVMNPQYNRNDVAHSCGQICGRIEGCTHSCTLLCHPGPCPPCQAIVNRECGCGKTTSSVQCCLKDHIQCTSTCQKPLNCELHLCEDKCHDGKCKVCDKKVQQNCHCGKQERQVACTKDSHEKKNYSCGKPCGKDLKCGNHKCKDCCHSGECRPCNLSPEVVKTCPCGKIPVEDRSSCLDPIPVCDGICNKTLRCGKPVNPHHCKSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVRKRSCGKHKCNQECCIDIDHICPLPCNYTLSCGKHKCDQSCHRGNCQPCYRSSFEELYCECGTEVIYPPVPCGTKKPPCKRPCSRAHPCDHPVQHNCHSAASCPPCMIFTTKWCFGGHEQRKTIPCIQASFSCGLACNKELACKRHKCIKPCHEGPCQVPGDVCKQPCTTSRPGCGHKCLAPCHDGACPETSCKEMVEVTCDCGNRKQMRACSEYAREYRRIATALLASSMAEVQRGNTIELSDIMGPIKITSSNKGLDCNEECRVLERNRRLAVGLQTHTNEQQPKQLTKYSEYIRKNAKKYPTLVQYIHETLTSLVKLAKESKQKSRSHSFPSMNQEKRRLVHAMCEVFGVDSVAYDAEPNRNVVATAYKDKSWLPAQSIMDVLQRESGQRRVPVPSNNPTGGKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -