Basic Information

Insect: Microdon myrmicae
Gene Symbol: L_1
Assembly: GCA_963931805.1
Location: OZ007497.1:260189151-260202485[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 5.7e-06 0.00066 20.8 1.7 1 23 195 217 195 217 0.98

2 17 0.48 55 5.3 5.8 1 23 223 245 223 245 0.98

3 17 2.5e-07 2.8e-05 25.1 3.1 1 23 251 273 251 273 0.99

4 17 1.1e-05 0.0013 19.9 0.3 1 23 279 301 279 301 0.98

5 17 0.68 78 4.9 0.3 2 23 364 387 363 387 0.88

6 17 0.0066 0.76 11.2 0.5 2 23 405 427 404 427 0.96

7 17 0.021 2.4 9.6 1.4 1 23 505 527 505 527 0.97

8 17 0.00041 0.047 15.0 1.5 2 23 535 556 534 556 0.96

9 17 0.0066 0.75 11.2 1.1 1 23 564 589 564 589 0.91

10 17 0.63 73 5.0 0.0 1 20 594 613 594 614 0.95

11 17 0.0015 0.17 13.2 2.9 1 23 681 703 681 704 0.96

12 17 0.00042 0.048 15.0 4.7 2 23 876 898 875 898 0.96

13 17 0.13 14 7.2 0.1 1 23 904 926 904 926 0.92

14 17 0.15 18 6.9 0.1 2 23 934 955 933 955 0.96

15 17 6.3 7.2e+02 1.8 0.9 2 23 1045 1066 1045 1066 0.93

16 17 0.046 5.3 8.5 0.0 1 20 1076 1095 1076 1098 0.95

17 17 0.14 16 7.0 1.3 1 23 1105 1127 1105 1127 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	5.7e-06	0.00066	20.8	1.7	1	23	195	217	195	217	0.98
2	17	0.48	55	5.3	5.8	1	23	223	245	223	245	0.98
3	17	2.5e-07	2.8e-05	25.1	3.1	1	23	251	273	251	273	0.99
4	17	1.1e-05	0.0013	19.9	0.3	1	23	279	301	279	301	0.98
5	17	0.68	78	4.9	0.3	2	23	364	387	363	387	0.88
6	17	0.0066	0.76	11.2	0.5	2	23	405	427	404	427	0.96
7	17	0.021	2.4	9.6	1.4	1	23	505	527	505	527	0.97
8	17	0.00041	0.047	15.0	1.5	2	23	535	556	534	556	0.96
9	17	0.0066	0.75	11.2	1.1	1	23	564	589	564	589	0.91
10	17	0.63	73	5.0	0.0	1	20	594	613	594	614	0.95
11	17	0.0015	0.17	13.2	2.9	1	23	681	703	681	704	0.96
12	17	0.00042	0.048	15.0	4.7	2	23	876	898	875	898	0.96
13	17	0.13	14	7.2	0.1	1	23	904	926	904	926	0.92
14	17	0.15	18	6.9	0.1	2	23	934	955	933	955	0.96
15	17	6.3	7.2e+02	1.8	0.9	2	23	1045	1066	1045	1066	0.93
16	17	0.046	5.3	8.5	0.0	1	20	1076	1095	1076	1098	0.95
17	17	0.14	16	7.0	1.3	1	23	1105	1127	1105	1127	0.93

Sequence Information

Coding Sequence: ATGAATAGACTCTTTGTTCATGTCATTTTGGAACAATGTCTTTCTTTTGCTTGTGTTCTTACAGATTTGTACTCTACGCACACCTCGTCCAGCTATTCACCCTCGATATCGGACGGTACGATAACGCCCAACTCATTGCACAACCATCAccagcaacatcatcatcatcacttggGGCATCATCACCGGCACAAGATGCAGTATCAATGTGACGAACAAAACAGCGTTGGCCAGAATCGCGAGAGGCATCACAATCGACATATTTCAGCCATAAATGGAGCAAGTGCTGGTGGTGTAGTtggcgatgaggacgatgacaATGGCGAGGACGACGGCGACGAGGACGAAGATGACGACGCCGGGAATTCTGGTGAGGAAAGGGTTTTCCTTTCATCAAAAAGTGCTGGTAACGATGTCGTTACCACTACATCGCAACCAACCAGGTACAGCAAGAGTGGCGCAACTGGCGAACATTCCATGAAAATTCCAACGAAattgcggaaaatcgatagggaTTCGGCAAAGTTGTTGGATAAGTTGACAAGTGATGGCATTAAGAGCGCGACCGACCGCGACGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGCCTTGGGTATCTGAAGAAACATGAACAGAGTCATGCGGAGCATCTACCATTTAAATGTGACTATTGTGCGAGGCTGTTTAAACATAAAAGATCTCGTGATCGTCACACCAAACTTCATACCGGCGACAGACGTTATAGGTGTCCACATTGTGAAGCTGCTTTTTCGCGGAGTGATCACTTGAAAATTCACATGAAAACCCATGACAACCAAAAGCCATTCCAGTGTACGATATGCAATCGCGGATATAACACAGCAGCAGCTCTTACGTCACATATGCAAAATCACAAAAAACAGGCGGCTTTGTTGGCAGCTGGAGGCAATCCCGCCGCGTTTAATTATAGTCCGCGTTCCACGGGTTCGGGATCGAGCAATGGAAGTCTGCAGAGACGAAGATATGCGCCCATTGCCAGTACCAAGAGTCCAAGCCCAAGTGGGGTGGAGTATGCCAAACGCTTACGCACCTTATATATTTCATGTGTTTATTGTACCAAATCTGATTTTTCTTCCATTGAGCAATTGAACAGTCACATCCAGTCGATGCATGAGAAAGAAACAATCGCCAATCAGCCTACACTGGCTGGcggttttcaaatatcttgtgaaTACTGTACAATGAAGTTCTCCAGCATCCCGGCGATGTTCCAGCACATGAAATCAACTCACATTGATCGCATTTCCAGTCCTAATACCTATTTTGAGCATTTTAACAGACTAGTGTCTACTGGAAACCTTGGGCCACGTTTACCCACTCCTAAAGGTAATGAAACAAAAGTCAAAATAGAGGAACCGAATTCTGGTGAAACCGACAAACCGGATGATGAACCCACAGATCTGAGCCAAAATAAGCGTTCTGATCAAACGCCAAATGCAGATCCTCCAGAAAAACCGGGAGTATTTTTTTGTAATCAATGTAACGACGGGTTCCCGGATTTCGACAGCTTTCGTAATCACTTAAAGTCACATATAGTCCAAGGATTAAACTTAGTTTGCCACCACTGTGGGCAAACATCTCGCGATCAAGCTGACTATGAAAAGCATGTCATCTCTCATTTTCTCACCACTACCTCCGAATACACTTGTGTAGAAAAAAAGTGCAACAAAACATACGGAAAATCGGAAGAACTTCAAAAACATCTATTCGAAAACCACATACAACCTCTGTATAAATGTTTACTGTGTACAGAACTATTTGAAACGAAGGTAGCAGTCCAAGTTCATCTAGCGTGTGTTCATTCGCCGGAAAATAAAATACTCCGCTGTTCAGCTTGTATGGAGACTTTTCATGGGGAACAAGAATTTCAAACCCATGTCAAAAATCGCCACCACGCCACAACAGGTTCTCCAATTCAATGCATGTTTTGCCGAGCAATTTGCTCCACAGAACTTGAAATGCATTTCCATTTAGCCGCTCATGCTCGCCAATTCCGGTGTCCGTCTTGTCCTGAAACTTTTCATGTCGAATTTCTACTTGATCGCCACATGCAAACCCACCACCACGGACAGAAAGACATTGAACCAAAATCTGTAAATTCGCCCTCGCTCAATTCACTCTACATGAATCCGTTTTTCAACAAACCGCTTCCCTCAAAtcaaaacaataacaacaacatcCTCGACTATAATGCATtcgccatgggaaagaatctattcGTAAACCCCACTGGAAATAAACTCTACAACCCTTTGCAAGTGGACACCGGTTCAGCGCTCAAACATCCATCGCTCATCTACGCCAGCCTCAGTCAGCGCTACTTTGACACAAACCGGACAATTTTGGAGATGTAcaaccaacagcagcaacaaGATCGAAATTTTTTCATCAGCCCGAATACCGGCATGAAGAGCACTATGTCCACCACCCAACTGGAAGCCAATAAACCTACGGAAAGAGTAACCAACAGCGACGGCTTTAGCTGTGGCATGTGCGAGCGCAACGATTTTCGAACGGAGGCTGAAATTCACTCACATCGCAAAATTGTCCATAATTTGAAAACCGGTGTCAGTCTCAGATGTGCATACTGCAATGGCAACTTCAAGTCCCGCAGCGAGCTAGAACACCACATGAAAACCTGCCACAATTCGACGGGTAAACACAAGTGCCTCATATGCGATGAAATATTCCCGTCACCTGCTATTCTTGCTGAGCACAAGCTACAACATTCCAAAGTGGGGCAGTCTGGCAAATGTTCATACTGCGCAAAGGTTCTCCCGGATATGGCCGCCTTCAAATCTCACCTATTAGATCACAATAACGAGGGACAAATACCAGTTCAGTGCATTTGTTGCCGCCAAACGCTTCAGTCCGACTTCGAAATCGGTCTGCACGCCAAGTTCCACACTAAATCGTCGTCCACATCGGAGAGTGCATGTGCCCTCTGCCTGGAAATCATTCCTAATTCAAATGAAGCCAAAGTGTGTGACAAATGCTGCCGCAAACACAACTTGTCCACGAAGTACAGCAGCCAACAGCGAAGCGTAGACGGGGGACGATCATCTTCGAATTTCGTTGAAAACCGTTGTAACCTCTGCAAAGTGATCATGCCGCATTCAAAGAAGTTGCAGGAGCACCTGGTCGAGCACACGTTCGTGGGCTGCGAGGATCGAGGGTTCACCTGCTACATATGCTCGGCCGTCTTCACAGCCCCTGCCGGCTTACTCACCCATATGCCAGAGCACGGAGCAAATTCCCGACCGTACGACTGTAATTTGTGCAGCGAGAAATTCTTCTTCCGGGCCGAGCTAGATCATCACCTAGTCGATCACGAAATGTCCGATCAGAGTCAGAAGAATACCGCAAGCAGCGAGACCACCCAGACCAGCCACCCCAGTGACGTCAAAACATTCCTAAACGAGCTTCCTTCGGAGGAAAATTCCTACAAAATGAAACTGAAGAATGAAATCGCCGACGAAAAACCAATAGACGAAGACGACGACGAATACATCGAGGTAGAAAAGGTCCCGGAAATTTCCCACCAAAATCCACATCCTTCTGAAAAGGAAGACTCATCGGCAGCCTAG
Protein Sequence: MNRLFVHVILEQCLSFACVLTDLYSTHTSSSYSPSISDGTITPNSLHNHHQQHHHHHLGHHHRHKMQYQCDEQNSVGQNRERHHNRHISAINGASAGGVVGDEDDDNGEDDGDEDEDDDAGNSGEERVFLSSKSAGNDVVTTTSQPTRYSKSGATGEHSMKIPTKLRKIDRDSAKLLDKLTSDGIKSATDRDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPAAFNYSPRSTGSGSSNGSLQRRRYAPIASTKSPSPSGVEYAKRLRTLYISCVYCTKSDFSSIEQLNSHIQSMHEKETIANQPTLAGGFQISCEYCTMKFSSIPAMFQHMKSTHIDRISSPNTYFEHFNRLVSTGNLGPRLPTPKGNETKVKIEEPNSGETDKPDDEPTDLSQNKRSDQTPNADPPEKPGVFFCNQCNDGFPDFDSFRNHLKSHIVQGLNLVCHHCGQTSRDQADYEKHVISHFLTTTSEYTCVEKKCNKTYGKSEELQKHLFENHIQPLYKCLLCTELFETKVAVQVHLACVHSPENKILRCSACMETFHGEQEFQTHVKNRHHATTGSPIQCMFCRAICSTELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHHGQKDIEPKSVNSPSLNSLYMNPFFNKPLPSNQNNNNNILDYNAFAMGKNLFVNPTGNKLYNPLQVDTGSALKHPSLIYASLSQRYFDTNRTILEMYNQQQQQDRNFFISPNTGMKSTMSTTQLEANKPTERVTNSDGFSCGMCERNDFRTEAEIHSHRKIVHNLKTGVSLRCAYCNGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSYCAKVLPDMAAFKSHLLDHNNEGQIPVQCICCRQTLQSDFEIGLHAKFHTKSSSTSESACALCLEIIPNSNEAKVCDKCCRKHNLSTKYSSQQRSVDGGRSSSNFVENRCNLCKVIMPHSKKLQEHLVEHTFVGCEDRGFTCYICSAVFTAPAGLLTHMPEHGANSRPYDCNLCSEKFFFRAELDHHLVDHEMSDQSQKNTASSETTQTSHPSDVKTFLNELPSEENSYKMKLKNEIADEKPIDEDDDEYIEVEKVPEISHQNPHPSEKEDSSAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -