Mmyr016030.1
Basic Information
- Insect
- Microdon myrmicae
- Gene Symbol
- -
- Assembly
- GCA_963931805.1
- Location
- OZ007499.1:4397464-4404098[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.1 1.3e+02 4.2 2.2 1 23 1126 1149 1126 1149 0.95 2 12 0.00046 0.053 14.8 5.7 2 23 1306 1327 1306 1327 0.97 3 12 0.00033 0.038 15.3 1.6 1 23 1333 1355 1333 1355 0.98 4 12 1.7e-07 1.9e-05 25.7 3.6 2 23 1362 1383 1361 1383 0.97 5 12 4.9 5.6e+02 2.2 0.1 5 23 1396 1414 1395 1414 0.96 6 12 0.0086 0.99 10.8 3.4 3 23 1421 1442 1419 1442 0.95 7 12 0.15 18 6.9 0.1 2 23 1453 1473 1452 1473 0.96 8 12 9.1e-05 0.01 17.1 0.8 1 19 1479 1497 1479 1498 0.96 9 12 0.00019 0.022 16.1 2.0 1 23 1509 1531 1509 1531 0.98 10 12 7e-05 0.008 17.4 7.1 1 23 1537 1559 1537 1560 0.96 11 12 0.0013 0.15 13.4 4.7 1 23 1565 1587 1565 1587 0.98 12 12 0.002 0.23 12.8 4.9 1 23 1593 1615 1593 1616 0.96
Sequence Information
- Coding Sequence
- atgggtgATACTGTGCAATGTCCAGTTTGTACATTGTACTTACTTCCGGGTATGGAGTTATCCGACCACCTGGAAACACACCCCAAAGAGAAAGTTATTAAGGCCCTTGTTCAATTGAGCCTGAAATCAGAAGTTTCCGAAACTGTCCTTCCTGATGTTCCATACAGAACTAGCAGAACATCTTTCAATGAAACTAACAGTAATACTTATCAAAATAGAGAATCCGAAAGGAGCTCATCAACATTGGAACATGAACCGAATGACAACTCAATAATTCCAGTATCACTTGAAGTACATGCGAAGCGAAAGAGCATTAATGAAAATGATGAATTTCCTACAATCTTGCAAACTAATCCGTCAAGCAGGCACTCTTTCAGCGAAAATGGCAATAATAGCAATACCAACAATAATAGTAATAACAGTATCTTCCCCCCACCAATAACGTCTTTCAGGACGAGTACCCAACCACAAATTACTGGTCAAACGCCGCCTTATTTGCCACATCAATTACATTCGCACAATCATCACCATTATCATCCGTATAACAATTATCATCCACAGAGTGGTAATAATTCAATTATGAGCCAACCATCTCCATTACGACTATTCTCCTATCAACCACCACCAAAACCACTGCAGCCTCCACCTACGTATGGCACAGCTATTAGTCAACTTCGATCTCAAAACAACCAAAACGTAATGGCAAGCAATATGACTCGACCCATATGCCCATCTGGTCACTACCAATCCGGGAGTTTTCCTGTTCGACCAACGATGTCAGTTCCACAAACATCTCCAAATCTACGATACCCCGTGAATTTTCTTGACGCTGGACCATTTTCTTCGGAGTCTTCTTCATCTCGGTCATGTGGGACTCCGCCCAGTGGGACTCCGCCACAGTTGTATCGTTCGCCATCAGTGCCTAGTGCACAAAGTGGTTTATCAAGCAATTCACCCCGTCCGCCTGTGATGGGTTCACCATCTGTCCTCAGATACGCTGAATCCCCCGTGACTGCCCATTATCTCGAAAGAGAAAATGGCGATTTTATTGTGCAGGAGACTCCAAAGCACGTCGTTGAATGTGTTGAAAAAGATGACGGAGAATTCTCTGTTATTGAGAGAGTGTATCACATGCCACCGAGCGTTGTACAAATCAACGAAGAAGAACTTGACGATGAAGAGTCGTGCCATGAATCCCCCAAAGAAGAGTCTCCAAAATCGCCGAACAGTGAGACCTCGTTTGAATCTGGACCCACAAATACAAATCAGGAAAATCAAGCACAAACACCACAAAGGCAAAAGAAAAAATCTGGTATCACAGTTCTTAGTGACGTTCAGTTAGATATAAATGAATACCTAGATTTGGTAGGAAATATTATAGCTTCAAGTAAAGTCGCTAAGGCCCGACAAGAACTGATTAAAATAGAAAAGTTCGAGCCAAAAGAGGAATACGAAGAAAGCGAAAACTTGTCCATTCCGAACCAAGACACTGTATTACACAAATCAGAGGAAATCAAAGACGATTTATCAAGTTCCAATTCTGAACCCAATCCCATTCCTCAAATGGAAACGCAAATTGCTCCATGTACAACGAGTGTCATTCGGTTGACCGCAAATCCAAATGCCAGATGTGCTACACCGACAATAGAAACTAAGCCCAATGATTTAATTCAGCTTCCGCATATGAATATTGAGACTTTACAGTTGAAAGATGAAGGTCCTCAGGATAATGAAACTGCTCAGAACGACAAAACTCCCGAAGATGATAAAACTCATCAAAATCCCGACGCTTCTCAGATGGATGTTGATCCCAAGGATGATcaattaaataaatttgattttccAGAAGATGAAGAAAAACCTTTAATGGAGCCCATGAAAAGTATCGCTTCCACCCCTACAACAGACCCAGTGGATCCAACAGCAATTCCTGTACAAAACGCAGAATCGTTCTCCAATGAACCTAATTCTGCAGATGCTGAAGTAACGAACAAGATTCCAATTATAACTGAAAACCAGCAAGGGGATTCGATAGCAAAAGCAGAAAATAACGCGATCGAAACAATAGAGGAACCTAAAGCGAAAATTCCAGTTTTTCAAGTCAAAAGACCATTCAGGAAAGTCCCAAAGAAAATCATTATTAAGCAAAAATGTAAAGAGACTGTTCCTCCTCCACAATCGGCTGAATCTGAACAATCTGACTTACCGATCGAACCCTTGAGGATAACTCCATCCACCTCAACAGAAACCAATCTAGTGGATCATCCGGAAAAGCAAGATCCCTTCCCTGAGCACAAGGAAGATCCACAAGCATTAGATGAATTTCAAGGTGTCAAAGAGGAGACCCCACAAGTAATAACAGACGCGAGTACCCTTCCTTTATTCGCCGATGCCGATGAAAAGCTACCCGCTGATGACGATATTCAGCCATCTCCTACAAGTCTGATATCCACCGAGGAAAAAGATCCGCCAAATGCTTTATCGGATGAGAAGCCCAGTACGGATTTAACCACACTTCTCGATCAGTGCATGAAAAAGGAAGAAATAGATGAGCATCCAATGCATTCTATATTTGGTTTAGAAATCGAAGGACCAGTGGAACCCATAAGCAATACAATAACCTCAGAGCCTAACTCAGTTTTCTCTACGTCTTCATTATTTTCGAAGCCATTGCCGTCTTCTGACCAACTTTCTGCTCCTGAAACTATTCTTCCGGATAACCCTAGTATACACGATCAAGAGCCACTTTCGCACCATGCATCCCCGCAATCAAACAATCCAGCTTTTTCTGAGTACCCTTTTAGTTTTCTCTATGATGGCGATGTTAACCATCAAGACGGGACTAAACATAATATTTCGCCCCCCATGTATTGCAATGAGGATTATAACAGATACAACGCAAATGCAAGCACTGGCACCAGCACCAACTGGTATCAGTCTCAAAATAGTGATCAAGACTTTGTGATAGAGGAGAAGGGCAGTTATTTAGATTTAGATTCATGCAAGCGGGGGTCTTCATTTAATTCTACCACAGAGGGCAGTATGCCTACACCCGATTCGCTTAATATTCGGTCAGATGAAAAAATGCCCGCAAAAGGAGAGATATCTGAACAGGAAAGCAATTGTGCCATCGAGAATTCCTGGAGTCAGCCACTCTACAATGACTTTCCAGTTCGGTTTCCCAATCCCTATCCAACTTTTATGAACGCGCACGAGAGTTGGAGTCAAGACCAATACCTTCGAGCGCAGGATTTGACTTCGGTGGACGCAAagaaTTTCAGTTTACGCTTATCCGACGATTCTCAGCTGGTTGAACCGTTGGCATCTACATCAAAACGGAAGAAAACAACGCCGAAAGTATCAAGAAAGAAGACCTTCCAGTGTATGCATTGCAGCACGTTTTTTCCCCTGCTAAAGGAGAAAAACGCCCACTTAATAAAACAGCACGGTTATAAACGTGTCAATCGCCGCCTTATTCGTGACCCACCGACTTCAACAGTTACTACAGCAACATTACAAACATCCGAAAGTGCGTCATCTTTAATTTTTGGAATGGAATCAACTGCAAGAACTTCCCCACCGGCCGAAGAGAAAGACTCCAAAGCAAACATCGTTAAAATAGAGCAAGAAAATCAAGACCAAAAGGATGAGAAAGAAGGTCTTCCTGAATTAACAATGGCGCCAGCGCCAGCACCACCTACTGATGAGATTATATCGCGCCCCAAATGTGATACAATGCGAGCACGGGATCATCGTATGCTTATCAATTTTAATCTAAATGCACTGCAGGTTAAAAAAGAGGGTGAAACTCATAATTACTACTCGGAATCCAAATCGTCATTTTTTTGTTTCGTTTGTAGGCAGGACTTTCTGACTGTCAAACTCTTTGATGAGCACCTAAATACTCATCCAGCCGAGTGCTTTACATGCCATAAAAAGTTCAAACGGTGGAAAAACTTTATGATACATCTGAAACGTCACCTGGGGTGGAAGGATTTCTGCTGCAACTACTGCGAAAAGAAGTTCGTCATTCGTAGCGCCCTCGTTGAACACGTACGAATGCACACGGGCCAAACGCCGTTAAAATGTAAAATCTGTGGTAAGAGCTTTAAACGGTACTCAAATTTAACACAACACCGTAAACGACATAACTCGAAAATAAATCGTGCCAAAGAATATGTCTGCTACTGTGGTGAGGTGCTCCCATCCAAAGCACGTTTCCTTTGGCACAAGGAAACTCATGACGTCAAGCCAAAGTGCTGCCCCTATTGTAGAGACCGGTTTGTACATGCCAATAGCCTTCGGCGACATATTCGTCTAGCGCACTCCGATAAATTTGACTACACCGAACCCATGGAGTGTCCAATGTGCAAACAAATTTATGCCAAGTCCAGCATCAAAGCACACATGGCAACACATTCGGTGGATAATCAACATGAGTGCTTAATTTGCAACAAGACCTTCAGCACCAAGTGGAATTTGAAGATCCACAATTGGGTTCATGCGAACAGGACAACGAAACCCTTCAAATGTACTCACTGTGTAAAAGCATTCGTCCGCGAAGTAGACTACAACAACCACCTCAATTCGCACAAACAGATAAAACCGTACACATGCGAATATTGCGGTTGTAAATTTATTCGTAAGTACAACTACATTCGCCACCGACGGGAACATCATGGCAATAAGAAATTCACCTGTGATCTATGCGGCAAGCTTTTCCATCGACACTACTATTTAATAGAGCATAGAAGGATCCACACCGGCGAACGGCCATTTCAGTGCACGATATGTGGCAAAAGTTCCGCAACCAAGACGAACcacaacaaacatttaaaaatacaCCATTCACGCGATCCTTTCACATCAGAAACATAA
- Protein Sequence
- MGDTVQCPVCTLYLLPGMELSDHLETHPKEKVIKALVQLSLKSEVSETVLPDVPYRTSRTSFNETNSNTYQNRESERSSSTLEHEPNDNSIIPVSLEVHAKRKSINENDEFPTILQTNPSSRHSFSENGNNSNTNNNSNNSIFPPPITSFRTSTQPQITGQTPPYLPHQLHSHNHHHYHPYNNYHPQSGNNSIMSQPSPLRLFSYQPPPKPLQPPPTYGTAISQLRSQNNQNVMASNMTRPICPSGHYQSGSFPVRPTMSVPQTSPNLRYPVNFLDAGPFSSESSSSRSCGTPPSGTPPQLYRSPSVPSAQSGLSSNSPRPPVMGSPSVLRYAESPVTAHYLERENGDFIVQETPKHVVECVEKDDGEFSVIERVYHMPPSVVQINEEELDDEESCHESPKEESPKSPNSETSFESGPTNTNQENQAQTPQRQKKKSGITVLSDVQLDINEYLDLVGNIIASSKVAKARQELIKIEKFEPKEEYEESENLSIPNQDTVLHKSEEIKDDLSSSNSEPNPIPQMETQIAPCTTSVIRLTANPNARCATPTIETKPNDLIQLPHMNIETLQLKDEGPQDNETAQNDKTPEDDKTHQNPDASQMDVDPKDDQLNKFDFPEDEEKPLMEPMKSIASTPTTDPVDPTAIPVQNAESFSNEPNSADAEVTNKIPIITENQQGDSIAKAENNAIETIEEPKAKIPVFQVKRPFRKVPKKIIIKQKCKETVPPPQSAESEQSDLPIEPLRITPSTSTETNLVDHPEKQDPFPEHKEDPQALDEFQGVKEETPQVITDASTLPLFADADEKLPADDDIQPSPTSLISTEEKDPPNALSDEKPSTDLTTLLDQCMKKEEIDEHPMHSIFGLEIEGPVEPISNTITSEPNSVFSTSSLFSKPLPSSDQLSAPETILPDNPSIHDQEPLSHHASPQSNNPAFSEYPFSFLYDGDVNHQDGTKHNISPPMYCNEDYNRYNANASTGTSTNWYQSQNSDQDFVIEEKGSYLDLDSCKRGSSFNSTTEGSMPTPDSLNIRSDEKMPAKGEISEQESNCAIENSWSQPLYNDFPVRFPNPYPTFMNAHESWSQDQYLRAQDLTSVDAKNFSLRLSDDSQLVEPLASTSKRKKTTPKVSRKKTFQCMHCSTFFPLLKEKNAHLIKQHGYKRVNRRLIRDPPTSTVTTATLQTSESASSLIFGMESTARTSPPAEEKDSKANIVKIEQENQDQKDEKEGLPELTMAPAPAPPTDEIISRPKCDTMRARDHRMLINFNLNALQVKKEGETHNYYSESKSSFFCFVCRQDFLTVKLFDEHLNTHPAECFTCHKKFKRWKNFMIHLKRHLGWKDFCCNYCEKKFVIRSALVEHVRMHTGQTPLKCKICGKSFKRYSNLTQHRKRHNSKINRAKEYVCYCGEVLPSKARFLWHKETHDVKPKCCPYCRDRFVHANSLRRHIRLAHSDKFDYTEPMECPMCKQIYAKSSIKAHMATHSVDNQHECLICNKTFSTKWNLKIHNWVHANRTTKPFKCTHCVKAFVREVDYNNHLNSHKQIKPYTCEYCGCKFIRKYNYIRHRREHHGNKKFTCDLCGKLFHRHYYLIEHRRIHTGERPFQCTICGKSSATKTNHNKHLKIHHSRDPFTSET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -