Basic Information

Insect: Microdon myrmicae
Gene Symbol: RREB1
Assembly: GCA_963931805.1
Location: OZ007502.1:28161719-28167493[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.064 7.3 8.1 0.8 1 21 231 251 231 253 0.93

2 14 0.00036 0.041 15.2 0.2 1 23 263 285 263 285 0.98

3 14 1e-05 0.0012 20.0 5.2 1 23 291 313 291 313 0.98

4 14 0.034 3.9 9.0 2.8 2 19 515 532 515 532 0.97

5 14 1.3 1.5e+02 4.0 0.6 1 20 578 597 578 599 0.84

6 14 0.0095 1.1 10.7 0.1 1 23 747 769 747 769 0.97

7 14 0.00038 0.043 15.1 2.6 1 23 778 800 778 800 0.99

8 14 0.0005 0.057 14.7 2.0 1 23 806 829 806 829 0.97

9 14 0.001 0.12 13.8 2.1 1 23 1176 1199 1176 1199 0.95

10 14 9.2e-05 0.011 17.0 0.3 2 23 1501 1522 1500 1522 0.97

11 14 0.15 18 6.9 6.3 1 23 1528 1551 1528 1551 0.97

12 14 4.8 5.5e+02 2.2 8.8 1 23 1659 1681 1659 1682 0.94

13 14 0.009 1 10.8 0.5 3 23 1731 1751 1729 1751 0.96

14 14 0.0026 0.3 12.4 4.8 1 23 1757 1779 1757 1779 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.064	7.3	8.1	0.8	1	21	231	251	231	253	0.93
2	14	0.00036	0.041	15.2	0.2	1	23	263	285	263	285	0.98
3	14	1e-05	0.0012	20.0	5.2	1	23	291	313	291	313	0.98
4	14	0.034	3.9	9.0	2.8	2	19	515	532	515	532	0.97
5	14	1.3	1.5e+02	4.0	0.6	1	20	578	597	578	599	0.84
6	14	0.0095	1.1	10.7	0.1	1	23	747	769	747	769	0.97
7	14	0.00038	0.043	15.1	2.6	1	23	778	800	778	800	0.99
8	14	0.0005	0.057	14.7	2.0	1	23	806	829	806	829	0.97
9	14	0.001	0.12	13.8	2.1	1	23	1176	1199	1176	1199	0.95
10	14	9.2e-05	0.011	17.0	0.3	2	23	1501	1522	1500	1522	0.97
11	14	0.15	18	6.9	6.3	1	23	1528	1551	1528	1551	0.97
12	14	4.8	5.5e+02	2.2	8.8	1	23	1659	1681	1659	1682	0.94
13	14	0.009	1	10.8	0.5	3	23	1731	1751	1729	1751	0.96
14	14	0.0026	0.3	12.4	4.8	1	23	1757	1779	1757	1779	0.99

Sequence Information

Coding Sequence: ATGCTGAAGACAACCTTTAAGAAACAATTAACAGATAGTCATATGCGTAAAATGGAACGACGCGAATCAACGACATCTGATTCATCGGTTGAACCGATGGATTTAGGTCGAAATTCGATTAAATTACCGGCTGACATACCAATTGAATCTAACACCGTGTTACAATTGCCAATGAGAAACAACAAAGATGCCATTCAAACAGATGCCAATATCAGATTCACTACAAATCATGACTCCGATGCTGACGAGTCCGATGACAAGGAGCACGATCACAAGAAGCGAATTCATAtacaccaccatcatcatcatcatcaccaccgtCGGCGTGTCAGTAATAGTCGTGATAAAAGAACTGTCCTTCTAGAATGCACCGACAGTCCACATTCGTTGCGAAAGAAATTCCGCTTTAGCATCAGTCACAACAATTCGGAGTCGGCGATGAATTTAAAGCAACCGAAACTAACGACACCAACAACGGCGAATACAACATCATCAACAACGAACAATGAGTCTGGATTCGTTGATACCAGTGGGAGTCATGTCATGAACACCTCTGGATCATCGGGAACATCATCAGCATCCTCATCGTCATCGCCAACATCCTCGTCTGCGGCTTCACCGTCGGCGAGTAACATTGCTTCGGCGGTCTCCAGTCCCGAATCTGGCGTGGGCGAACGTGACGACATGAAGTACCTTTGCCCAATTTGTGAAGTTGTATCGGCAACAGCACATGAATTTACCAATCACATACGGTGTCATAATTATTCATCTGGGGACACCGAAAATTTCACCTGTCGCATTTGCTCCAAGGTACTGTCATCCGCTTCATCACTGGATAGACACGTTTTAGTGCACACCGGAGAGCGACCATTCAACTGCAAATATTGTCAGTTGACCTTTACGACTAATGGCAACATGCACCGGCATATGCGGACTCATAAGCAACACCAGCAACATTATCATCGAAATTCTGCCGCAGCCAAAGGTGCTAATGTTACTTCGGGTAATAGTGGGGCTTCGGGCGCAAATATCATGATGCCACCTGCCGAACACACAGTTGTTTCCACTTCGGAAATGACAGTTAATCTGCCTGCGAAACCAACAAACATCACCAATGGTCTTTCTGTAACCAGCAATGGTGATGTACTCACCGCCGGCGGTCGAGGTGGCAATACTGGTGAAAGTTGCGAGAGCGATGGTGGATCCTCTTCAGACTCATCGGGCGGGGCAAGTCAAAGCTCGAATAACAACAACGACATCAGCACCAACAACAAAAACATAAGCAATTTCAAAAGAAAGAGCACCGATAGCATCGAGGACATGGTCATGATAAAGCGTCGCGTAAAAACCACCATCAACAACAACATCATCAACAGCATGCATgccgaaaagaaaacaattctcgAAAGCGATGGTGGGGGAGAAGTACAACACACCCAACAAGGTCAGAAATTTTTCTGTCCGGTCTGCAATCGCGACGACTTTGTCGGTATGCTGGCTCTAGGAGCCCACATGGATTATGAACATTCTGATATTCCCGCGAAATGCCGGCATTGCGACGTTGTCTTCAAGACCCATAAGCAACTTAATGTCCACCCCTGTACTTCGAAGATGAAGATCACATCCGGCTTCAAGGACCTAACTTTTGTCGACTTCTCAAGCGAGAAATTCCCCTTGATTACAAAGTCCTTGTGCGAGCAAAGTCTTCGGACATCAGTGAGCAATCAAAAGTTCGAGTGTTCCAAATGCTATCGAGCATTCTCATGTGCTAGTGCAGTCGAAATCCACGAGAAAAGCTGCACAACGTCCGGATTGAATCTACTCGTTGATGCACATGACTTCTCCATTCGCAAGCGAAGAACGGTGAGCGAGAGTTCTGAGGGAGCGGAAGACGACGACAATCGCCGGGACTTCTTCGCGCGTTTGCATTTACACAAATCCGCACAAAGTATGACTAGCCTGTCGACATCTTCACCGACACTCTCGGATGTCAAGTCCACCGAGATGGACAAGCCACAAGTCAGAGTGCCACAACTAGAGCATTATCATGACACCAAAGAACTTGCAGACATTCAGTCCATTCTAAACATAACTTCCTCGTCCTCAACGAACAGTTTCCTAAGGAACTTCGAAAATTCTGTCAACGCGCCGATAGTCAACTACGGCGGAGAGAACGGGGAAGAGGAAGCCCAGGATGCGTTCACCTCTGAATTCCGTAAAATGAAATTACGCGGTGAATTCCCGTGCAAACTCTGCACAGCGGTGTTTCCGAATCTACGCGCTTTAAAGGGGCACAATAGGATCCACCTCAGCGCCGCTGGGCCGGGTCCGTATCGCTGCAACATGTGCACGTATTCGATACACGACAAAACCGCATTAGTGCGCCATATGCGAACCCACAATGGCGATCGACCATACGAGTGTGCTATTTGCAACTACGCCTTCACCACCAAAGCGAACTGTGAACGCCATTTGCGAAACCGACACGCAAAAGCTACTCGTGATGAAGTGAAACGAGCGATCATTTATCACCCTTCTGAGGACTCGAACTGTGATGATGCCATCAAAAAGATTCACATGTTCTCCTCCCTCGAATTCGATCACGACGACATCGATCAGAATCACCCGCCTAAGGATCGGTCGACACCAGTGTCTCATTTGAAAGAAATGCTACAAGCCGAATCGAAGCCGCTTAAGATTCAGGTCAAAAGCTTGGAAAAATTAATCGATAAGCCACCGCCGTCTGCTTTCAATCCACCAGAAGCAGTTGCGAAACCCACAGAACTTGAAGATGTTGGAGATTCAAAGAACTCTCATCCCATGGACCTGAGTATGGATGCCCTCGATCTAAGTAAAAAACCCGCGAAATCTCCCAAAGTCGAGGAAAAgccgccatcaccaccaccaCCTCCTCCACAGCAAAACCACGGCGTTCGTCCTCCTCCCATCGATGAACAAAACCTCGAAATAAGTGTCTTAGAAAAGAACCAGCAACTCTTATTAGCTCACCAACGCCTGCTCAGCGAAGGAATACCAAAGATCGACCCCGCACAATATTTCCAACTCTCACAACTCTACCGAAACCTCGTGTTCCAACCCCTCCATCCATTTTTCCTTCAGAACCCATTGCTACCAAATAACATCGCTGATCTGAGTAAATTCGCACCGCTCATGAACCCCTTGTTGCAACACAATGCCGGATCTGACCCCTTGCCATCGTTGCCATCTGGCACTCAAAACATCCAACCAAAATCCAACGCCAACGAAGGAAACATGATCATGAAACAGCCCAATATCCGCTCACATTCACCAATTCCCATGCAAAGTCAACCTTTGCCTAGGAACCTCACTCCTTCATCACAATTGTCGCCCATACAACGAAGCAACCCGCACGTCCTACCAGTCTCTCACCCAGCGGGAATGCTTTCTTCCCCCGTCCCCAATACCGGCCCGGTGAAGATGGTTATCAAAAATGGTGTTCTTATGCCGAAACAAAAGCAACGTCGCTACCGCACCGAAAGACCGTTCGCATGTGAACACTGCTCAGCTCGTTTTACCCTCCGTTCCAATATGGAGCGACATATCAAACAACAACATCCTCAATTTTGGGCCCAACGGCAGCGAAGTGGCCATCACATACTGCGTGGCCGCACCCACAGTTCCGGACTGCCGCATATACAACCAGGTCATCCAATAATCGAAAGTACTCATCCGGCAAACAACAATTTGCTAACCAGTCCGTTGAGTGCCATTTCAGATCAAGTCAAATACGCCATACTTGCCCAGCAGCTCAAATCCCGCAAAGAAACTACTGACATCCTCCAACAAGCGCTTTCTCAAGGGTCCAACAATATAATACCCCAAGGCTCGAATCCCACAATTGACAACCTTCGGAAATCCCTAAGTTCGTCATCGAATGTAAACAACGGGAGTGTGGAAGATGACGATCCCAAATTGGTCATCGATTTAGACGAGAAAAAGGAAGATGAAGATGACGAACCCGAAGACCTCAAGCCCGATAAATCTTTGCTCACAGTACAAGAACCTAAAGAGCCAACCTCAAACGAAGCTGCTAAAAAAGTAGCCGAGTCCATTCTGGAACAAGCCATGAAAACCGGCACCAAGTGTGCCTACGTAAATAACTCCACAGACGAAGACCGTACCCCAGGCAAAGATTTCGGCCTTAAATTGTCCAAGAACATGATTGCTCAAGCTGAATCTGTCGGGAAATTCCTCAAAGAAGTCGCCAGTTCTCCCTTCAAAGACGAAAACAACGATTTGGCTTCCGTCTCCAAATTGGTTGACAATGCTACAAACCCCATCTCCTTCAGTAATTATTTCCGACCCAGCGACGTTGTCAATCAAATGGAACAAAGCGATGAAGAAGGTCTAGTAGCCTCTGGAAGTGCGTCAGAAAGTAACCACTCAGGTCCCGAAGATTTACCGGGGTCCGAGGAGCCAAAGAAGAAATCTGCATACAGTTCGGCACCAAATCGAGTATCGTGTCCTTATTGCCAAAGAATGTTTCCTTGGTCTAGCTCCCTGCGTCGTCACATTCTAACACATACCGGACAGAAGCCATTCAAATGCTCGCATTGCCCTCTACTGTTCACCACCAAAAGTAACTGTGATCGTCACTTATTACGCAAACACGGCAACGTCGAGTCCGCTGTTTCTCTCTACGTTCCTATTGACGATGTTAACGAACCTTTACCCGTTCCGAAATCCGTCGAAGAAATCGAACAGCAACAATTgctgcaacagcagcagcagcaacagcaaaaAAAATTGGAGGAGCAAGCAGATCTACATAAACTTCAAACTGCTCATCAGCCCCATCATCACCAACCACCGCCACCGCTTCCGCCCTCGCATCAACAGCAGCCACAAAATCAACATCCGACTATCGAATCACCCGAGAACGGACCCAAACAGGAGCCAACTCTACCCGTCATCTGCGCATCCGAACTACCGTTCAAGTGTCACTTATGCGACTGTTCCTTTGCCGACCGTCTACAATGCCTCGACCACATTAAAAACCATCACACCCAAGAGTTTGCCCTTCTCTTATCCAAAGGTGCTATCGACAGCGAAGCCGACCCCAATGCCCAAGTACAATCGACGGAGGACGATGAAAAGCGCGACGAAAGTCGAGGTAAATATCCCGACTACAGCAACCGTAAAGTAATTTGTGCCTTTTGCGTCAGACGCTTTTGGTCCACAGAAGACCTCCGCCGCCATATGCGCACCCACTCTGGTGAACGACCCTTCCAGTGTGATGTTTGCCTACGCAAGTTTACCCTCAAGCACAGCATGCTGCGTCACATGAAAAAACACAGTAGCGGAAGTCATTCAAGTAACGGCGCATCAAACGCCACCAACAGCGGTTCCGACATGTCAGATGATGAACAACCTCCAGCAAATATTACGCCCAGCTCAACTCAACGCCCTCTCAACAAGCTCCAAGAGCTCTTCTCAAAAAGCACCAGTGAATGGCGGGCCAACCGCCTTTCCGCTGAACACAAAGAAAACATCGAGGAACACCAAAATCAATCCGACCTGATTGGAAACCTTCTGGGCATCAGCGACCAAGGTATCCTCAATAAGCTCCTTTCTTCAGCCGACGAAGCCGCTAAGTTCCTAGGCGTTGACAAGTAG
Protein Sequence: MLKTTFKKQLTDSHMRKMERRESTTSDSSVEPMDLGRNSIKLPADIPIESNTVLQLPMRNNKDAIQTDANIRFTTNHDSDADESDDKEHDHKKRIHIHHHHHHHHHRRRVSNSRDKRTVLLECTDSPHSLRKKFRFSISHNNSESAMNLKQPKLTTPTTANTTSSTTNNESGFVDTSGSHVMNTSGSSGTSSASSSSSPTSSSAASPSASNIASAVSSPESGVGERDDMKYLCPICEVVSATAHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSAAAKGANVTSGNSGASGANIMMPPAEHTVVSTSEMTVNLPAKPTNITNGLSVTSNGDVLTAGGRGGNTGESCESDGGSSSDSSGGASQSSNNNNDISTNNKNISNFKRKSTDSIEDMVMIKRRVKTTINNNIINSMHAEKKTILESDGGGEVQHTQQGQKFFCPVCNRDDFVGMLALGAHMDYEHSDIPAKCRHCDVVFKTHKQLNVHPCTSKMKITSGFKDLTFVDFSSEKFPLITKSLCEQSLRTSVSNQKFECSKCYRAFSCASAVEIHEKSCTTSGLNLLVDAHDFSIRKRRTVSESSEGAEDDDNRRDFFARLHLHKSAQSMTSLSTSSPTLSDVKSTEMDKPQVRVPQLEHYHDTKELADIQSILNITSSSSTNSFLRNFENSVNAPIVNYGGENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKTALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKATRDEVKRAIIYHPSEDSNCDDAIKKIHMFSSLEFDHDDIDQNHPPKDRSTPVSHLKEMLQAESKPLKIQVKSLEKLIDKPPPSAFNPPEAVAKPTELEDVGDSKNSHPMDLSMDALDLSKKPAKSPKVEEKPPSPPPPPPQQNHGVRPPPIDEQNLEISVLEKNQQLLLAHQRLLSEGIPKIDPAQYFQLSQLYRNLVFQPLHPFFLQNPLLPNNIADLSKFAPLMNPLLQHNAGSDPLPSLPSGTQNIQPKSNANEGNMIMKQPNIRSHSPIPMQSQPLPRNLTPSSQLSPIQRSNPHVLPVSHPAGMLSSPVPNTGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQFWAQRQRSGHHILRGRTHSSGLPHIQPGHPIIESTHPANNNLLTSPLSAISDQVKYAILAQQLKSRKETTDILQQALSQGSNNIIPQGSNPTIDNLRKSLSSSSNVNNGSVEDDDPKLVIDLDEKKEDEDDEPEDLKPDKSLLTVQEPKEPTSNEAAKKVAESILEQAMKTGTKCAYVNNSTDEDRTPGKDFGLKLSKNMIAQAESVGKFLKEVASSPFKDENNDLASVSKLVDNATNPISFSNYFRPSDVVNQMEQSDEEGLVASGSASESNHSGPEDLPGSEEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIDDVNEPLPVPKSVEEIEQQQLLQQQQQQQQKKLEEQADLHKLQTAHQPHHHQPPPPLPPSHQQQPQNQHPTIESPENGPKQEPTLPVICASELPFKCHLCDCSFADRLQCLDHIKNHHTQEFALLLSKGAIDSEADPNAQVQSTEDDEKRDESRGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDVCLRKFTLKHSMLRHMKKHSSGSHSSNGASNATNSGSDMSDDEQPPANITPSSTQRPLNKLQELFSKSTSEWRANRLSAEHKENIEEHQNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -