Basic Information

Insect: Microdon myrmicae
Gene Symbol: prg
Assembly: GCA_963931805.1
Location: OZ007496.1:61013959-61033916[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.4 1.7e+02 3.8 1.2 1 15 204 218 204 226 0.73

2 9 0.16 18 6.9 3.0 1 23 232 255 232 255 0.97

3 9 3.8e-06 0.00043 21.4 2.0 1 23 261 283 261 283 0.97

4 9 7.6e-09 8.7e-07 29.9 1.2 1 23 289 311 289 311 0.98

5 9 5e-06 0.00057 21.0 0.2 1 23 317 339 317 339 0.96

6 9 0.00022 0.025 15.8 4.0 1 23 345 367 345 367 0.97

7 9 1.9e-05 0.0022 19.2 2.7 1 23 473 495 473 495 0.95

8 9 1.5e-05 0.0017 19.5 4.3 1 23 500 522 500 523 0.96

9 9 5.1e-05 0.0058 17.9 0.7 1 23 527 549 527 549 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.4	1.7e+02	3.8	1.2	1	15	204	218	204	226	0.73
2	9	0.16	18	6.9	3.0	1	23	232	255	232	255	0.97
3	9	3.8e-06	0.00043	21.4	2.0	1	23	261	283	261	283	0.97
4	9	7.6e-09	8.7e-07	29.9	1.2	1	23	289	311	289	311	0.98
5	9	5e-06	0.00057	21.0	0.2	1	23	317	339	317	339	0.96
6	9	0.00022	0.025	15.8	4.0	1	23	345	367	345	367	0.97
7	9	1.9e-05	0.0022	19.2	2.7	1	23	473	495	473	495	0.95
8	9	1.5e-05	0.0017	19.5	4.3	1	23	500	522	500	523	0.96
9	9	5.1e-05	0.0058	17.9	0.7	1	23	527	549	527	549	0.97

Sequence Information

Coding Sequence: ATGACCGATGTAAGCTTTACCCAAGAGTCACTGCCCACTTTGTGCAGACTTTGCTTGAAAAGAGAAGAGTTTTTGACTGATATGTACCATCGGCTGGACCAACCATTACAACAGGAATCGCTGCAATCTAAAATTTTCGATTTATATCAAGTAAAGGTAGAGGAGAAAGATGGCCTGCCAACGAATATTTGCCACAAATGTCTATATTTAACAGAATCCTTTTTTGCATTTCGGAAAAACGTAAAACAGTGCGAAGCACAACTTAAATCACATCTGGAAGCGGGAGTACAAAGAGACAGTGCAATGCAACCAgaagaagtaaagcaagaaaacCAGGATTATGAATACGACAGCATTAACGGATGCCTTGGATTTGTGCCAAATGATGACTGCGAAATAACGGTTGTCGACCCAAATCAAGAATATGAGAGTTCAGATGATGGTTTCTCAATGGAGGAATCTGATAATGAATTTCCGATTAACAACACCGCGAATAACACCAAACCACAGCCTGAAACAGTTCCGCAGGAAACTGTTATACCGCCAGAAAATCCGCAACGTATCACAGTAAATAATCCAGTAGAAACAGGCAGTGAACTAAAGAATACCTTCCTCTGTCAGTACTGCGACATGGCTTTCACAGCTCAAACGGAATGTGATGAGCATGAATCACGTCACGATGCGGCGAATCCGTTTTCATGTAATTTCTGTCCATTCCGAACAATGAATCGACAAGTTTTAATACACCACATTAAGAAATCACACGATGTTGAAAGACCTTATGTTTGTGCTTTATGTAATAAGGGATTCTGCCGTCGTTCCGATCTAAAGAAACACACCATTGTGCACACTGGTGTTCGACCATTCTCTTGTCCAGTCTGTTCAAAGAGCTTTTCACGTAACACAAACCTCACGAAACACATAAGAATTCATTCCAGCGTTAAACCACACGCTTGTGCAACTTGTCCGAGATCATTCGTTACTGCAGCAGAACTAGCACGGCATCAGCGATCTCATTTGGAGAATAAGCCGCATAAGTGTTACAAATGCCCGGCATCATTTGCACGCAAGGATAAACTAAAGAAGCACTTCCTCTCACATCTAAATAATGAGACTGATTTGAAGTTAGAAGGTAATAAGTCTGTTCCGGAAAGTAATAGTTTTCCTGGAAATCCACCAAATAACAAAGAGAACAACCAACAACAATCGACAGAAAAGTACACACCTGTAGGAAATTGTTTTACTGGTATAAGTTATTCGCCAGCAGTGAACCTCTCTGCGAAACCACAAGCAAGCTTCGACAATAGTCACTATGCTGCTCAATTTTATCAAACGCAGTCTACCCAGCTGCCTCCACCGCCGCCACCAATTCGTAATGATCACCCGTTACCAGTAACCAATACCAATGTTAAGGTACACATCTGTGAGATTTGCTATAAGACCTTCACAAGGAAAAGAGAATTCGAGAGGCACCAGGCTCTGCACCTTGATAGTTTGTACAAATGCAAAGCATGCGGAAAGAATTTCAATCGTAAGGACAAGCTGTTCCGGCACGAGGAAACCCATCACTCCGAGCAATTCTTTTGTAATCAATGTAATATAAGTTTCTCTAAGTTGGAAGCTCTGCAGATGCACCTTAAGATCCATGAATTACAGAAAAACACACCGCGAAATGAACAAGAACACCCGATGGCCTTGGGATTCTACAGTGAAATCAAGTCAGAAGAATAA
Protein Sequence: MTDVSFTQESLPTLCRLCLKREEFLTDMYHRLDQPLQQESLQSKIFDLYQVKVEEKDGLPTNICHKCLYLTESFFAFRKNVKQCEAQLKSHLEAGVQRDSAMQPEEVKQENQDYEYDSINGCLGFVPNDDCEITVVDPNQEYESSDDGFSMEESDNEFPINNTANNTKPQPETVPQETVIPPENPQRITVNNPVETGSELKNTFLCQYCDMAFTAQTECDEHESRHDAANPFSCNFCPFRTMNRQVLIHHIKKSHDVERPYVCALCNKGFCRRSDLKKHTIVHTGVRPFSCPVCSKSFSRNTNLTKHIRIHSSVKPHACATCPRSFVTAAELARHQRSHLENKPHKCYKCPASFARKDKLKKHFLSHLNNETDLKLEGNKSVPESNSFPGNPPNNKENNQQQSTEKYTPVGNCFTGISYSPAVNLSAKPQASFDNSHYAAQFYQTQSTQLPPPPPPIRNDHPLPVTNTNVKVHICEICYKTFTRKREFERHQALHLDSLYKCKACGKNFNRKDKLFRHEETHHSEQFFCNQCNISFSKLEALQMHLKIHELQKNTPRNEQEHPMALGFYSEIKSEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -