Basic Information

Insect: Microdon myrmicae
Gene Symbol: -
Assembly: GCA_963931805.1
Location: OZ007502.1:9086407-9089013[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0059 0.68 11.3 0.5 3 23 212 232 211 232 0.98

2 10 6e-07 6.9e-05 23.9 0.3 1 23 238 260 238 260 0.98

3 10 0.073 8.3 7.9 2.0 1 23 266 288 266 288 0.97

4 10 3.6e-06 0.00042 21.5 0.6 1 23 294 316 294 316 0.99

5 10 0.0002 0.023 16.0 0.7 1 23 322 344 322 344 0.98

6 10 0.00067 0.077 14.3 2.9 3 23 690 710 689 710 0.98

7 10 3.2e-06 0.00036 21.6 0.6 1 21 716 736 716 737 0.96

8 10 0.0044 0.5 11.8 2.0 1 23 744 766 744 766 0.96

9 10 5.9e-07 6.7e-05 23.9 0.9 1 23 772 794 772 794 0.99

10 10 5.8e-05 0.0066 17.7 0.2 1 23 800 822 800 822 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0059	0.68	11.3	0.5	3	23	212	232	211	232	0.98
2	10	6e-07	6.9e-05	23.9	0.3	1	23	238	260	238	260	0.98
3	10	0.073	8.3	7.9	2.0	1	23	266	288	266	288	0.97
4	10	3.6e-06	0.00042	21.5	0.6	1	23	294	316	294	316	0.99
5	10	0.0002	0.023	16.0	0.7	1	23	322	344	322	344	0.98
6	10	0.00067	0.077	14.3	2.9	3	23	690	710	689	710	0.98
7	10	3.2e-06	0.00036	21.6	0.6	1	21	716	736	716	737	0.96
8	10	0.0044	0.5	11.8	2.0	1	23	744	766	744	766	0.96
9	10	5.9e-07	6.7e-05	23.9	0.9	1	23	772	794	772	794	0.99
10	10	5.8e-05	0.0066	17.7	0.2	1	23	800	822	800	822	0.94

Sequence Information

Coding Sequence: ATGTCAAGTTTGCTTGACTGGGAAAATgtgtgtttagtttgtttacgaAAAGGTGAGAGTCGCTTTATCTTCGCAGAAGATAACGATTTAAATGTGATTgctaataaaataatgaaatgcgcGGATGTTTTTGTTAAGAGAGATATAAATCAACCACAAAACATCTGTTTGCGATGCCTTGATGACCTGAACGTCGCCTATAAATTCCGCCGCAACTGTGAGCAGtcagactctataatcaaagcaattctaaatacaaatcaccaaaagtttaaaataaaggaCATACTGAAAACGACCCCAATCATAGTGAACCAAACACATGACATCCTCTTTAAGGACGGAATTGTAGCATGTCCTGTAGTTGGTGATACCTGTGACGGCGAGAGCACACTCCGTCTTAACATAGATGATCGTGATTCTGAAGTTAATATTTTTGAAGATTGTACAGGAGCTTCTGTCTCTGATAACGTCATGGAACAAAATAATGCAAAAGCCAATGAAAGTAATCAAACTGAACAAGAGATGAATTATGATGTTTCAAAACGACCGCGAGGGCGACCAAAGAAAGCAGGCGAAGTATTCTGTGGGGAGGGAATCCTGCAGTCTGCTTACAAAAGACCCCTGAAAATTTGTAAGATATGTAATCGCGGTTTAAGGGGTCAAGCCAGATACACCGTTCATATGAGACGTcataacaatgagcgaccttttaGTTGTGATTATTGTGATAAAGCTTTTGTGAGGGCCGCGGAATTACAGTCTCATAAGAGAGTCcacactggtgaaaagcctttCAAATGTCAATATTGTGATCGTTGGTTTTCTGATTACAGCGTCAGAAGGAACCATGAGAGCACACACACCGGTGAAAGACCATACAAATGCTCGACTTGTGGCAAGAACTATGCAAATGCTAAGGGCCTGACAGAGCATCTTAAAACTCACACCGGCGTAAAGAAGTACGTCTGCAAAGAATGCGGTAAAGGATTCATGAAAAAGGTGGTTTTTGAAAGGCACAGAATCCGTCATCTGGCTCGAAAGGAATTAAACAAATTATCGGAACATAAACAAAAGAAGCAGCTAGAAAACGAAATATTCCAAATAGAAGAAAATGTGAATTCGAACgagattaacatcaaacatgaaattgtggaCAATGCTGTAGTCGACGATGCTTGTGAAAGCACGCCCTGtcttgatttagaatatatttctGACTCTGAAGCCAGATTTATTGGCGAATATCGTGCAGATGCCTTTACCACCATGAAGATAAGTAAGATGAAATCCAGCGAATGTAATCAAACTAAACAGGAGGTGTATTGTGGAAGTCCCAGACGACCCAGAGGGCGGCCAAGGAAATCAACAGAAGTATCTTCTGCAAACCTAAAGTCTAAAAGTAGTCTGAAGATTTGTGAATCAATGCCAATTACAATGAACCGAACACATGACATCCGTATTAAACATGAAATTTTGGAAAGTGATGTTCCCGATGATACTTGTTATGAGGATACACCATGTCTTGATTTTGGTGCTGACCCTGAAGCCAGTTTTGTTGGCAAAGATCGTGCAGATGCCTGTACCACTTTGGAATTATGTAATATGGAATCCAACGAAAGTAGTCAAACTAAACAGGACATGTATTGTGGAAGTCCAAGACGTCCCAGAGGGCGGCCAAAGAAATCAACCGAAGTATATTCTGCAAACCTAAAGTCTGAAACTACTCCGAAGATTTGTGAATCAAACCCAATCACAATGAACCCAATACATGACATTCGTATTAAACACGAGATTTTAGGGTACGTCAACGATCCTTATGATGAAAGCACTCCATCTATTGACGTGAAAAGTAATCCCGATATTGAAGTCAAATTTTCTAGAGAAGATCGTGCCTTGCCCCACAGTAACACTATAGAACTGAATAAGGTGAAGGTCAATCCTAGTAATAAAACCAAACGCGAGGCGAATTCTGAAATTTCGAAACGACCCAGAGGGCGACCAAAGAAATCTCCCGAAGAGTCATTGAGACGTGCAAAGTCGGCCTACAGAAAGCCTCAGAAGATTTGTAAGATATGTAATCACGCTTTTAGGGATCAACATGGACTCGACAGTCAtgtgagacgccataacaatgaacgacctttcagttgtgatcattgCGACAAATCTTTTGTGACTTCCACAGAATTACTTCGTCATGTAAGAGAGTACACTGGtcagaagccttacaaatgtcaatattgtGATCGTCGCTTCTCTGTCAAGGGCATCAGAAATAaccacgagcgcacgcacacgggtgaaagaccGTACGTATGTCCGACTTGTGGCAAGAGCTTCGCGTATTCTTACGTCCTATCGAAGCATCGTAGAACTCATACTGCCGTAAAGAAATTTGTGTGCAATGAATGCGGTAAAGCATTCAAGACGAGAATGCCTTTTGAAAAACATGTAGCCGATCACTACATTCGAGCTAAATTAGATCAACCGGAGCCCGAACAAACGACACTATTAGAAAAAGAAGTATTCCAAAAAGAGGAATTTGCTACCTCGGGTGAAATTAACATCAAGGATGAGCTTATCATCGAGGATGAAATTAGTTAA
Protein Sequence: MSSLLDWENVCLVCLRKGESRFIFAEDNDLNVIANKIMKCADVFVKRDINQPQNICLRCLDDLNVAYKFRRNCEQSDSIIKAILNTNHQKFKIKDILKTTPIIVNQTHDILFKDGIVACPVVGDTCDGESTLRLNIDDRDSEVNIFEDCTGASVSDNVMEQNNAKANESNQTEQEMNYDVSKRPRGRPKKAGEVFCGEGILQSAYKRPLKICKICNRGLRGQARYTVHMRRHNNERPFSCDYCDKAFVRAAELQSHKRVHTGEKPFKCQYCDRWFSDYSVRRNHESTHTGERPYKCSTCGKNYANAKGLTEHLKTHTGVKKYVCKECGKGFMKKVVFERHRIRHLARKELNKLSEHKQKKQLENEIFQIEENVNSNEINIKHEIVDNAVVDDACESTPCLDLEYISDSEARFIGEYRADAFTTMKISKMKSSECNQTKQEVYCGSPRRPRGRPRKSTEVSSANLKSKSSLKICESMPITMNRTHDIRIKHEILESDVPDDTCYEDTPCLDFGADPEASFVGKDRADACTTLELCNMESNESSQTKQDMYCGSPRRPRGRPKKSTEVYSANLKSETTPKICESNPITMNPIHDIRIKHEILGYVNDPYDESTPSIDVKSNPDIEVKFSREDRALPHSNTIELNKVKVNPSNKTKREANSEISKRPRGRPKKSPEESLRRAKSAYRKPQKICKICNHAFRDQHGLDSHVRRHNNERPFSCDHCDKSFVTSTELLRHVREYTGQKPYKCQYCDRRFSVKGIRNNHERTHTGERPYVCPTCGKSFAYSYVLSKHRRTHTAVKKFVCNECGKAFKTRMPFEKHVADHYIRAKLDQPEPEQTTLLEKEVFQKEEFATSGEINIKDELIIEDEIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -