Basic Information

Insect: Microdon myrmicae
Gene Symbol: -
Assembly: GCA_963931805.1
Location: OZ007502.1:9202896-9204956[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.4e-06 0.00016 22.8 0.9 3 23 311 331 310 331 0.98

2 9 1.6e-07 1.9e-05 25.7 1.5 1 23 337 359 337 359 0.98

3 9 0.0001 0.012 16.9 1.6 1 23 365 387 365 387 0.98

4 9 1.5e-07 1.7e-05 25.8 0.4 1 23 393 415 393 415 0.99

5 9 2.8e-05 0.0032 18.7 0.2 1 23 422 444 422 444 0.94

6 9 0.0003 0.034 15.4 4.5 2 23 566 587 565 587 0.98

7 9 2.4e-08 2.7e-06 28.3 1.1 1 23 593 615 593 615 0.98

8 9 0.0006 0.069 14.5 1.4 1 23 621 643 621 643 0.99

9 9 0.0015 0.17 13.2 0.3 1 23 649 672 649 672 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.4e-06	0.00016	22.8	0.9	3	23	311	331	310	331	0.98
2	9	1.6e-07	1.9e-05	25.7	1.5	1	23	337	359	337	359	0.98
3	9	0.0001	0.012	16.9	1.6	1	23	365	387	365	387	0.98
4	9	1.5e-07	1.7e-05	25.8	0.4	1	23	393	415	393	415	0.99
5	9	2.8e-05	0.0032	18.7	0.2	1	23	422	444	422	444	0.94
6	9	0.0003	0.034	15.4	4.5	2	23	566	587	565	587	0.98
7	9	2.4e-08	2.7e-06	28.3	1.1	1	23	593	615	593	615	0.98
8	9	0.0006	0.069	14.5	1.4	1	23	621	643	621	643	0.99
9	9	0.0015	0.17	13.2	0.3	1	23	649	672	649	672	0.80

Sequence Information

Coding Sequence: ATGTCACATTTAATTGACTGGGAAaatgtgtgtttggtttgtttacaaaaaggtgaGAGTCGTTTCATCTTCGGAGACGATAACGATTcaaatgtgattgctgataaaataatgaaatgttcCGATATATTAATCAAAAAAGATACAAACCAACCAAAAAACATCTGTCTACAATGCCTGAATGATTTAAACGTCGCCTACAAATTCCGTCGAAATTGCGAGCAATCGGACTCAATAATCAAATCACttctaaataaaaaccaccaaGTGTTTCAACTAAATGACTTATGGCAAACAACCCCAATCATAGTGAACCCAACAAATGACATCAAAATTAAAGATGAAATTCTGGACAACGTTGTGGTGGACAATACCCATGAGAACACACCCTCTTTTGATTTAAAGGATGATCCTAATACTGAAACCAAATTTGATCCCGAAGTCTGTGCAGATACATGTGTCCATACTGACGCTATGGAACTAAAAAATGCGAAAGCCAATCAGCGTAATAAACCCAAAGAGGAGATAAATTGTGCAATTTCTAGACCACCCAGACGGCCGCCAAAGGAATTAAAGGAAGAATTGCCTGCAGAGCTGTTCCAAATTGTGGACGACGTTGTAGTTGATGGTTCTTGTGAGAACGCATCCTGCCATGACTTAGCAGATGATCCTCATGCTGAAGATAAACTTGTTAAACATATAGTCGACGATGTTTGTGACAAAAAAGGTACGCTCTCTCTTGACTTAGAAGATGATTCTAATACTATAgacaaaattgttattggaaatcGTGGAGGGGCCGTTGTTTTTGATAACGCTGTGGAACTAAATAGTGTGGAGCCTAATCAAAGCAATAAAACCAAACAAGAGATGGATTGTGAAATTTCAAGCCAAACCAGAGGGTCGCCAAAGGCATCAACTCAAAAGATTTGTAAAATATGTGGTCACAGTTTTAGCGGTCAAAGTGCACTCAGTGTTCACATGAGACGTCATAAAAAAGAGCGAAATTTCAGTTGTGACCATTGCGACAAAGCTTTTGTGACCTCCACGGAATTACGACGTCATGTAAGAGTGCACACTGGCCAAAAGCCCtataaatgtcaatactgtggtCGTCGATTCGCTGACCAAAGCGTCAGAAAAAACCACGAAAGCacacacacgggtgaaaggccatacGTGTGCCCGACTTGTGGCAAGACCTTTTCATTATCCAAAGGTCTGACGGTGCATCTTCGAACCCATACTATCACCAGAAAGAAATTCGTGTGCAAAGAATGCGACAAAGAATTCACGAGAAAGGTGCTTTTTGAAATACATGTAGCCGACCATCTGATTCGAAAAGAATCAGATAAATCATCGGAGTGTAAGCAAAAGAAACGattagaaaaagaaatcttccaaatacaggaaaacgcGAACACGAGTGAAATTagtatcaaacatgaaattgtagacgaCGCTACAGTAGACGATGACGAATGCGCACCCTGCCATGAATTCGAAGTTGATCCCGGTAGTCAAGCCGAAGTTGTTAAGGATCGTGGAGATGCATGTACCCAAAATAACGCTATGGAACTAAATAAAGCGGAAGCCATTGAAAGTAATAAAACCAAACAGGAGCTGAATTCTGAGATTTCTAAGACATTAACTAAAAATTCCTGTGCAAAGCGAAGGCGCAAGTTGGTTTATAAAACTTGCAAGATATGTAATCACAGTTTTGTAGGTAAACATGCACTCGATaatcacatgagacgccataacaatgagcgaccCTTCAGCTGTGAGCATTGCGACAAAGCTTTTGTGACCGCTACGGAATTACAACGCCATATGAGAGTGCACACTGGtcagaagccttacaaatgtcaatactgtgatcgtggGTTCGCTGGCTACAGCGCCAGAAAGACCCACGAACgcaagcacacgggtgaaagacCGTACGTATGCCCGACTTGTGGCAAAACCTTCGCCTCATATACTAATGGCCTGAAGAAGCATCTTGTTATTCACAGCAGGCAAATAGTTCCTTCAAAATACGTATCGATGCCCTGGTAA
Protein Sequence: MSHLIDWENVCLVCLQKGESRFIFGDDNDSNVIADKIMKCSDILIKKDTNQPKNICLQCLNDLNVAYKFRRNCEQSDSIIKSLLNKNHQVFQLNDLWQTTPIIVNPTNDIKIKDEILDNVVVDNTHENTPSFDLKDDPNTETKFDPEVCADTCVHTDAMELKNAKANQRNKPKEEINCAISRPPRRPPKELKEELPAELFQIVDDVVVDGSCENASCHDLADDPHAEDKLVKHIVDDVCDKKGTLSLDLEDDSNTIDKIVIGNRGGAVVFDNAVELNSVEPNQSNKTKQEMDCEISSQTRGSPKASTQKICKICGHSFSGQSALSVHMRRHKKERNFSCDHCDKAFVTSTELRRHVRVHTGQKPYKCQYCGRRFADQSVRKNHESTHTGERPYVCPTCGKTFSLSKGLTVHLRTHTITRKKFVCKECDKEFTRKVLFEIHVADHLIRKESDKSSECKQKKRLEKEIFQIQENANTSEISIKHEIVDDATVDDDECAPCHEFEVDPGSQAEVVKDRGDACTQNNAMELNKAEAIESNKTKQELNSEISKTLTKNSCAKRRRKLVYKTCKICNHSFVGKHALDNHMRRHNNERPFSCEHCDKAFVTATELQRHMRVHTGQKPYKCQYCDRGFAGYSARKTHERKHTGERPYVCPTCGKTFASYTNGLKKHLVIHSRQIVPSKYVSMPW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -